RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 C5orf17Q8NAS9 161 aa11.77□□□□□ -0.53
HMGN3-203ENST00000620514 INO80EQ8NBZ0 244 aaPredicted RBP11.77□□□□□ -0.53
HMGN3-203ENST00000620514 ASB13Q8WXK3 278 aa11.77□□□□□ -0.53
HMGN3-203ENST00000620514 TNFSF18Q9UNG2 199 aa11.77□□□□□ -0.53
HMGN3-203ENST00000620514 GGTLC3B5MD39 225 aa11.76□□□□□ -0.53
HMGN3-203ENST00000620514 NXPH4O95158 308 aa11.76□□□□□ -0.53
HMGN3-203ENST00000620514 ZNF80P51504 273 aaPredicted RBP11.76□□□□□ -0.53
HMGN3-203ENST00000620514 LYPD5Q6UWN5 251 aa11.76□□□□□ -0.53
HMGN3-203ENST00000620514 OR2T35Q8NGX2 323 aa11.76□□□□□ -0.53
HMGN3-203ENST00000620514 ACTR3CQ9C0K3 210 aaPredicted RBP11.76□□□□□ -0.53
HMGN3-203ENST00000620514 C16orf90A8MZG2 172 aa11.75□□□□□ -0.53
HMGN3-203ENST00000620514 G3V3Q6 166 aa11.75□□□□□ -0.53
HMGN3-203ENST00000620514 SIVA1O15304 175 aa11.75□□□□□ -0.53
HMGN3-203ENST00000620514 CXorf1O96002 111 aa11.75□□□□□ -0.53
HMGN3-203ENST00000620514 SUMO1P63165 101 aaKnown RBP11.75□□□□□ -0.53
HMGN3-203ENST00000620514 ZNF726P1Q15940 193 aa11.75□□□□□ -0.53
HMGN3-203ENST00000620514 MRPL23Q16540 153 aaKnown RBP11.75□□□□□ -0.53
HMGN3-203ENST00000620514 IQCF2Q8IXL9 164 aa11.75□□□□□ -0.53
HMGN3-203ENST00000620514 TMEM167BQ9NRX6 74 aa11.75□□□□□ -0.53
HMGN3-203ENST00000620514 C11orf21Q9P2W6 132 aa11.75□□□□□ -0.53
HMGN3-203ENST00000620514 PSG8Q9UQ74 426 aa11.75□□□□□ -0.53
HMGN3-203ENST00000620514 LRP1BQ9NZR2 4599 aa11.75□□□□□ -0.53
HMGN3-203ENST00000620514 BORCS7-ASMTA0A0B4J1R7 106 aa11.74□□□□□ -0.53
HMGN3-203ENST00000620514 TRAV4A0A0B4J268 109 aa11.74□□□□□ -0.53
HMGN3-203ENST00000620514 SERTM2A0A1B0GWG4 89 aa11.74□□□□□ -0.53
HMGN3-203ENST00000620514 M0R2P5 195 aa11.74□□□□□ -0.53
HMGN3-203ENST00000620514 IGLV2-11P01706 119 aa11.74□□□□□ -0.53
HMGN3-203ENST00000620514 LINC00315P59091 139 aa11.74□□□□□ -0.53
HMGN3-203ENST00000620514 NDFIP1Q9BT67 221 aa11.74□□□□□ -0.53
HMGN3-203ENST00000620514 SDF2L1Q9HCN8 221 aa11.74□□□□□ -0.53
HMGN3-203ENST00000620514 EPDR1Q9UM22 224 aa11.74□□□□□ -0.53
HMGN3-203ENST00000620514 K7EQD1 137 aa11.73□□□□□ -0.53
HMGN3-203ENST00000620514 GYPEP15421 78 aa11.73□□□□□ -0.53
HMGN3-203ENST00000620514 NEGR1Q7Z3B1 354 aa11.73□□□□□ -0.53
HMGN3-203ENST00000620514 OR4C5Q8NGB2 326 aa11.73□□□□□ -0.53
HMGN3-203ENST00000620514 KCNS1Q96KK3 526 aa11.73□□□□□ -0.53
HMGN3-203ENST00000620514 K7EQM0 130 aa11.72□□□□□ -0.53
HMGN3-203ENST00000620514 GCGP01275 180 aa11.72□□□□□ -0.53
HMGN3-203ENST00000620514 SRIP30626 198 aa11.72□□□□□ -0.53
HMGN3-203ENST00000620514 FLI1Q01543 452 aaPredicted RBP11.72□□□□□ -0.53
HMGN3-203ENST00000620514 RGS21Q2M5E4 152 aa11.72□□□□□ -0.53
HMGN3-203ENST00000620514 SPATA12Q7Z6I5 190 aa11.72□□□□□ -0.53
HMGN3-203ENST00000620514 PRNTQ86SH4 94 aa11.72□□□□□ -0.53
HMGN3-203ENST00000620514 TMEM75Q8N9X5 138 aa11.72□□□□□ -0.53
HMGN3-203ENST00000620514 LOC100131303A0A0U1RQF7 123 aa11.71□□□□□ -0.53
HMGN3-203ENST00000620514 Q6ZRN7 208 aaPredicted RBP11.71□□□□□ -0.53
HMGN3-203ENST00000620514 CYB561D1Q8N8Q1 229 aa11.71□□□□□ -0.53
HMGN3-203ENST00000620514 PCNPQ8WW12 178 aaKnown RBP11.71□□□□□ -0.53
HMGN3-203ENST00000620514 LINC00479Q96M42 142 aa11.71□□□□□ -0.53
HMGN3-203ENST00000620514 TNFRSF18Q9Y5U5 241 aa11.71□□□□□ -0.53
HMGN3-203ENST00000620514 TRAV34A0A0B4J273 112 aa11.7□□□□□ -0.54
HMGN3-203ENST00000620514 CTXND1A0A1B0GTU2 59 aa11.7□□□□□ -0.54
HMGN3-203ENST00000620514 A0A1W2PRE2 83 aa11.7□□□□□ -0.54
HMGN3-203ENST00000620514 C9JCJ5 164 aa11.7□□□□□ -0.54
HMGN3-203ENST00000620514 BTF3P20290 206 aaKnown RBP11.7□□□□□ -0.54
HMGN3-203ENST00000620514 FGF8P55075 233 aaPredicted RBP11.7□□□□□ -0.54
HMGN3-203ENST00000620514 KRTAP10-2P60368 255 aa11.7□□□□□ -0.54
HMGN3-203ENST00000620514 UBE2G2P60604 165 aa11.7□□□□□ -0.54
HMGN3-203ENST00000620514 SMUG1Q53HV7 270 aa11.7□□□□□ -0.54
HMGN3-203ENST00000620514 CYTL1Q9NRR1 136 aa11.7□□□□□ -0.54
HMGN3-203ENST00000620514 ABCA13Q86UQ4 5058 aa11.7□□□□□ -0.54
HMGN3-203ENST00000620514 HSPG2P98160 4391 aa11.69□□□□□ -0.54
HMGN3-203ENST00000620514 SMLR1H3BR10 107 aa11.69□□□□□ -0.54
HMGN3-203ENST00000620514 TAAR5O14804 337 aa11.69□□□□□ -0.54
HMGN3-203ENST00000620514 ARPC5O15511 151 aa11.69□□□□□ -0.54
HMGN3-203ENST00000620514 ORM1P02763 201 aa11.69□□□□□ -0.54
HMGN3-203ENST00000620514 PFN1P07737 140 aaKnown RBP11.69□□□□□ -0.54
HMGN3-203ENST00000620514 DPPA3Q6W0C5 159 aa11.69□□□□□ -0.54
HMGN3-203ENST00000620514 WFDC10BQ8IUB3 73 aa11.69□□□□□ -0.54
HMGN3-203ENST00000620514 GATA1P15976 413 aaPredicted RBP11.68□□□□□ -0.54
HMGN3-203ENST00000620514 ZNF876PQ49A33 203 aa11.68□□□□□ -0.54
HMGN3-203ENST00000620514 ZFP69Q49AA0 526 aa11.68□□□□□ -0.54
HMGN3-203ENST00000620514 AKR1C8PQ5T2L2 129 aa11.68□□□□□ -0.54
HMGN3-203ENST00000620514 C9orf85Q96MD7 179 aa11.68□□□□□ -0.54
HMGN3-203ENST00000620514 DNAH5Q8TE73 4624 aa11.68□□□□□ -0.54
HMGN3-203ENST00000620514 RS1O15537 224 aa11.67□□□□□ -0.54
HMGN3-203ENST00000620514 IFNA7P01567 189 aa11.67□□□□□ -0.54
HMGN3-203ENST00000620514 SAPCD1Q5SSQ6 148 aa11.67□□□□□ -0.54
HMGN3-203ENST00000620514 TXNDC17Q9BRA2 123 aa11.67□□□□□ -0.54
HMGN3-203ENST00000620514 ARL2-SNX15V9GYD0 113 aa11.67□□□□□ -0.54
HMGN3-203ENST00000620514 IGHV3-73A0A0B4J1V6 119 aa11.66□□□□□ -0.54
HMGN3-203ENST00000620514 PGPEP1LA6NFU8 196 aa11.66□□□□□ -0.54
HMGN3-203ENST00000620514 FBLL1A6NHQ2 334 aaKnown RBP11.66□□□□□ -0.54
HMGN3-203ENST00000620514 FAM74A7A6NL05 159 aa11.66□□□□□ -0.54
HMGN3-203ENST00000620514 RNASE3P12724 160 aaKnown RBP11.66□□□□□ -0.54
HMGN3-203ENST00000620514 CFAP126Q5VTH2 177 aa11.66□□□□□ -0.54
HMGN3-203ENST00000620514 KRTAP4-5Q9BYR2 181 aa11.66□□□□□ -0.54
HMGN3-203ENST00000620514 LY96Q9Y6Y9 160 aa11.66□□□□□ -0.54
HMGN3-203ENST00000620514 PEX7O00628 323 aa11.65□□□□□ -0.54
HMGN3-203ENST00000620514 ZNF506Q5JVG8 444 aa11.65□□□□□ -0.54
HMGN3-203ENST00000620514 Q86TA4 180 aa11.65□□□□□ -0.54
HMGN3-203ENST00000620514 NHLRC2Q8NBF2 726 aa11.65□□□□□ -0.54
HMGN3-203ENST00000620514 APOBP04114 4563 aaKnown RBP11.65□□□□□ -0.54
HMGN3-203ENST00000620514 IGKV3D-20A0A0C4DH25 116 aa11.64□□□□□ -0.55
HMGN3-203ENST00000620514 MAP1LC3B2A6NCE7 125 aa11.64□□□□□ -0.55
HMGN3-203ENST00000620514 CDK2AP2O75956 126 aa11.64□□□□□ -0.55
HMGN3-203ENST00000620514 SLC25A29Q8N8R3 303 aa11.64□□□□□ -0.55
HMGN3-203ENST00000620514 MAP1LC3BQ9GZQ8 125 aa11.64□□□□□ -0.55
HMGN3-203ENST00000620514 FUSP35637 526 aaKnown RBP eCLIP11.63□□□□□ -0.55
HMGN3-203ENST00000620514 PPT1P50897 306 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms