RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 C1orf159Q96HA4 380 aa10.81□□□□□ -0.68
CNOT3-210ENST00000618939 CST9LQ9H4G1 147 aa10.81□□□□□ -0.68
CNOT3-210ENST00000618939 COL4A2P08572 1712 aa10.8□□□□□ -0.68
CNOT3-210ENST00000618939 PRAC2D3DTV9 90 aa10.8□□□□□ -0.68
CNOT3-210ENST00000618939 TANC2Q9HCD6 1990 aa10.8□□□□□ -0.68
CNOT3-210ENST00000618939 PIEZO1Q92508 2521 aa10.8□□□□□ -0.68
CNOT3-210ENST00000618939 F8VRH5 84 aa10.8□□□□□ -0.68
CNOT3-210ENST00000618939 IGHV4-61A0A0C4DH41 118 aa10.8□□□□□ -0.68
CNOT3-210ENST00000618939 ZNF48Q96MX3 618 aaPredicted RBP10.8□□□□□ -0.68
CNOT3-210ENST00000618939 C5orf42Q9H799 3197 aa10.79□□□□□ -0.68
CNOT3-210ENST00000618939 RNF223E7ERA6 249 aa10.79□□□□□ -0.68
CNOT3-210ENST00000618939 H3BUA1 57 aa10.79□□□□□ -0.68
CNOT3-210ENST00000618939 CRYGBP07316 175 aa10.79□□□□□ -0.68
CNOT3-210ENST00000618939 LY6G5BQ8NDX9 201 aa10.79□□□□□ -0.68
CNOT3-210ENST00000618939 YAE1D1Q9NRH1 226 aa10.79□□□□□ -0.68
CNOT3-210ENST00000618939 SDHAF1A6NFY7 115 aa10.79□□□□□ -0.68
CNOT3-210ENST00000618939 ANKRD39Q53RE8 183 aa10.79□□□□□ -0.68
CNOT3-210ENST00000618939 PLEKHB2Q96CS7 222 aa10.79□□□□□ -0.68
CNOT3-210ENST00000618939 C2orf70A6NJV1 201 aa10.79□□□□□ -0.68
CNOT3-210ENST00000618939 TMEM238C9JI98 176 aa10.79□□□□□ -0.68
CNOT3-210ENST00000618939 NEGR1Q7Z3B1 354 aa10.79□□□□□ -0.68
CNOT3-210ENST00000618939 TRPT1Q86TN4 253 aaKnown RBP10.79□□□□□ -0.68
CNOT3-210ENST00000618939 PGPEP1Q9NXJ5 209 aa10.79□□□□□ -0.68
CNOT3-210ENST00000618939 OCIAD2Q56VL3 154 aa10.79□□□□□ -0.68
CNOT3-210ENST00000618939 KLK9Q9UKQ9 250 aa10.79□□□□□ -0.68
CNOT3-210ENST00000618939 C20orf78Q9BR46 151 aa10.78□□□□□ -0.68
CNOT3-210ENST00000618939 TOMM7Q9P0U1 55 aa10.78□□□□□ -0.68
CNOT3-210ENST00000618939 TRAV12-2A0A075B6T6 113 aa10.78□□□□□ -0.68
CNOT3-210ENST00000618939 PCP2Q8IVA1 136 aa10.78□□□□□ -0.68
CNOT3-210ENST00000618939 DEFB125Q8N687 156 aa10.78□□□□□ -0.68
CNOT3-210ENST00000618939 KLHL30-AS1Q8NEE0 82 aa10.78□□□□□ -0.68
CNOT3-210ENST00000618939 SIRPDQ9H106 197 aa10.78□□□□□ -0.68
CNOT3-210ENST00000618939 IGHV4-39P01824 125 aa10.78□□□□□ -0.68
CNOT3-210ENST00000618939 IGHV1OR15-1A0A075B7D0 117 aa10.77□□□□□ -0.68
CNOT3-210ENST00000618939 SIVA1O15304 175 aa10.77□□□□□ -0.68
CNOT3-210ENST00000618939 C5orf56Q8N8D9 126 aa10.77□□□□□ -0.68
CNOT3-210ENST00000618939 ERG28Q9UKR5 140 aa10.77□□□□□ -0.68
CNOT3-210ENST00000618939 SPRY2O43597 315 aa10.77□□□□□ -0.69
CNOT3-210ENST00000618939 HLA-DRB4P13762 266 aa10.77□□□□□ -0.69
CNOT3-210ENST00000618939 CTRLP40313 264 aa10.77□□□□□ -0.69
CNOT3-210ENST00000618939 HLA-DRB4X5D2U9 266 aa10.77□□□□□ -0.69
CNOT3-210ENST00000618939 TMEM262E9PQX1 116 aa10.77□□□□□ -0.69
CNOT3-210ENST00000618939 PMVKQ15126 192 aa10.77□□□□□ -0.69
CNOT3-210ENST00000618939 ODF3BA8MYP8 253 aa10.77□□□□□ -0.69
CNOT3-210ENST00000618939 CDKN1BP46527 198 aa10.77□□□□□ -0.69
CNOT3-210ENST00000618939 A8MWV9 139 aa10.76□□□□□ -0.69
CNOT3-210ENST00000618939 GNRH2O43555 120 aa10.76□□□□□ -0.69
CNOT3-210ENST00000618939 SCRT2Q9NQ03 307 aa10.76□□□□□ -0.69
CNOT3-210ENST00000618939 DSCAMO60469 2012 aa10.76□□□□□ -0.69
CNOT3-210ENST00000618939 A0A087WX48 190 aa10.76□□□□□ -0.69
CNOT3-210ENST00000618939 IGHV4-38-2P0DP08 117 aa10.76□□□□□ -0.69
CNOT3-210ENST00000618939 PRADC1Q9BSG0 188 aa10.76□□□□□ -0.69
CNOT3-210ENST00000618939 MYCNOSP40205 109 aa10.76□□□□□ -0.69
CNOT3-210ENST00000618939 BLCAPP62952 87 aa10.76□□□□□ -0.69
CNOT3-210ENST00000618939 DLX4Q92988 240 aaPredicted RBP10.76□□□□□ -0.69
CNOT3-210ENST00000618939 KNCNA6PVL3 124 aa10.76□□□□□ -0.69
CNOT3-210ENST00000618939 FSTL3O95633 263 aa10.76□□□□□ -0.69
CNOT3-210ENST00000618939 C16orf54Q6UWD8 224 aa10.76□□□□□ -0.69
CNOT3-210ENST00000618939 TMEM141Q96I45 108 aa10.76□□□□□ -0.69
CNOT3-210ENST00000618939 TRGV1A0A0A0MS02 117 aa10.75□□□□□ -0.69
CNOT3-210ENST00000618939 MYMXA0A1B0GTQ4 84 aa10.75□□□□□ -0.69
CNOT3-210ENST00000618939 INSP01308 110 aa10.75□□□□□ -0.69
CNOT3-210ENST00000618939 TCTEX1D4Q5JR98 221 aa10.75□□□□□ -0.69
CNOT3-210ENST00000618939 NOTCH2Q04721 2471 aa10.75□□□□□ -0.69
CNOT3-210ENST00000618939 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.75□□□□□ -0.69
CNOT3-210ENST00000618939 A0A0U1RRA0 63 aa10.75□□□□□ -0.69
CNOT3-210ENST00000618939 SIGMAR1Q99720 223 aa10.75□□□□□ -0.69
CNOT3-210ENST00000618939 K7EP34 96 aa10.74□□□□□ -0.69
CNOT3-210ENST00000618939 CCL25O15444 150 aa10.74□□□□□ -0.69
CNOT3-210ENST00000618939 DNAL4O96015 105 aa10.74□□□□□ -0.69
CNOT3-210ENST00000618939 IGHV4-59P01825 116 aa10.74□□□□□ -0.69
CNOT3-210ENST00000618939 RPL36AP83881 106 aaKnown RBP10.74□□□□□ -0.69
CNOT3-210ENST00000618939 PAX2Q02962 417 aa10.74□□□□□ -0.69
CNOT3-210ENST00000618939 SP5Q6BEB4 398 aaPredicted RBP10.74□□□□□ -0.69
CNOT3-210ENST00000618939 ADAMTSL5Q6ZMM2 481 aa10.74□□□□□ -0.69
CNOT3-210ENST00000618939 OR13C6PQ8NH95 151 aa10.74□□□□□ -0.69
CNOT3-210ENST00000618939 RPL36ALQ969Q0 106 aaKnown RBP10.74□□□□□ -0.69
CNOT3-210ENST00000618939 UBE2E2Q96LR5 201 aa10.74□□□□□ -0.69
CNOT3-210ENST00000618939 TRAV8-2A0A0B4J237 113 aa10.74□□□□□ -0.69
CNOT3-210ENST00000618939 TRGV4A0A0C4DH28 118 aa10.74□□□□□ -0.69
CNOT3-210ENST00000618939 LY6LH3BQJ8 138 aa10.74□□□□□ -0.69
CNOT3-210ENST00000618939 ZNF493Q6ZR52 646 aa10.74□□□□□ -0.69
CNOT3-210ENST00000618939 SPXQ9BT56 116 aa10.74□□□□□ -0.69
CNOT3-210ENST00000618939 PTPN13Q12923 2485 aa10.73□□□□□ -0.69
CNOT3-210ENST00000618939 IGHV4-30-2A0A087WSY4 118 aa10.73□□□□□ -0.69
CNOT3-210ENST00000618939 TMEM95Q3KNT9 176 aa10.73□□□□□ -0.69
CNOT3-210ENST00000618939 PHLDA1Q8WV24 401 aaPredicted RBP10.73□□□□□ -0.69
CNOT3-210ENST00000618939 A0A1B0GV72 72 aa10.73□□□□□ -0.69
CNOT3-210ENST00000618939 A0A1W2PPM0 123 aa10.73□□□□□ -0.69
CNOT3-210ENST00000618939 DEFB112Q30KQ8 113 aa10.73□□□□□ -0.69
CNOT3-210ENST00000618939 ARHGAP32A7KAX9 2087 aa10.73□□□□□ -0.69
CNOT3-210ENST00000618939 J3QLI3 93 aa10.73□□□□□ -0.69
CNOT3-210ENST00000618939 TTC32Q5I0X7 151 aa10.73□□□□□ -0.69
CNOT3-210ENST00000618939 AJUBAQ96IF1 538 aa10.73□□□□□ -0.69
CNOT3-210ENST00000618939 TIMM21Q9BVV7 248 aa10.73□□□□□ -0.69
CNOT3-210ENST00000618939 K7EP13 123 aa10.72□□□□□ -0.69
CNOT3-210ENST00000618939 C9orf47Q6ZRZ4 202 aa10.72□□□□□ -0.69
CNOT3-210ENST00000618939 SAP30O75446 220 aa10.72□□□□□ -0.69
CNOT3-210ENST00000618939 IGHV3-53P01767 116 aa10.72□□□□□ -0.69
CNOT3-210ENST00000618939 ZNF80P51504 273 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms