RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 C3orf56Q8N813 242 aa12.41□□□□□ -0.42
RTN1-209ENST00000611068 DAZAP1Q96EP5 407 aaKnown RBP12.41□□□□□ -0.42
RTN1-209ENST00000611068 GFRA4Q9GZZ7 299 aa12.41□□□□□ -0.42
RTN1-209ENST00000611068 CCDC168Q8NDH2 2452 aa12.4□□□□□ -0.42
RTN1-209ENST00000611068 TMSB15BA0A087X1C1 80 aa12.4□□□□□ -0.42
RTN1-209ENST00000611068 RPL27AP46776 148 aaKnown RBP12.4□□□□□ -0.42
RTN1-209ENST00000611068 MORN3Q6PF18 240 aaPredicted RBP12.4□□□□□ -0.42
RTN1-209ENST00000611068 MRPL36Q9P0J6 103 aaKnown RBP12.4□□□□□ -0.42
RTN1-209ENST00000611068 PPDPFLQ8WWR9 84 aa12.4□□□□□ -0.43
RTN1-209ENST00000611068 S4R3C0 116 aa12.4□□□□□ -0.43
RTN1-209ENST00000611068 D6R8Y8 96 aa12.39□□□□□ -0.43
RTN1-209ENST00000611068 HBDP02042 147 aa12.39□□□□□ -0.43
RTN1-209ENST00000611068 CRYGBP07316 175 aa12.39□□□□□ -0.43
RTN1-209ENST00000611068 KLF17Q5JT82 389 aaPredicted RBP12.39□□□□□ -0.43
RTN1-209ENST00000611068 FXYD5Q96DB9 178 aa12.39□□□□□ -0.43
RTN1-209ENST00000611068 TRAV4A0A0B4J268 109 aa12.39□□□□□ -0.43
RTN1-209ENST00000611068 CENPVL3A0A0U1RRI6 287 aa12.39□□□□□ -0.43
RTN1-209ENST00000611068 CRLF1O75462 422 aa12.39□□□□□ -0.43
RTN1-209ENST00000611068 MYCNOSP40205 109 aa12.39□□□□□ -0.43
RTN1-209ENST00000611068 TRAV40A0A0B4J280 105 aa12.38□□□□□ -0.43
RTN1-209ENST00000611068 A0A1B0GUT8 65 aa12.38□□□□□ -0.43
RTN1-209ENST00000611068 PGPA6NDG6 321 aa12.38□□□□□ -0.43
RTN1-209ENST00000611068 CIARTQ8N365 385 aaPredicted RBP12.38□□□□□ -0.43
RTN1-209ENST00000611068 H3BTX0 84 aa12.38□□□□□ -0.43
RTN1-209ENST00000611068 PAX8Q06710 450 aa12.38□□□□□ -0.43
RTN1-209ENST00000611068 SRSF12Q8WXF0 261 aaKnown RBP12.38□□□□□ -0.43
RTN1-209ENST00000611068 KLF12Q9Y4X4 402 aa12.38□□□□□ -0.43
RTN1-209ENST00000611068 ZNF469Q96JG9 3925 aaPredicted RBP12.37□□□□□ -0.43
RTN1-209ENST00000611068 TRAV8-1A0A0A6YYK1 113 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 NBR2O15453 112 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 IGHV4-38-2P0DP08 117 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 PSMB2P49721 201 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 GAGE2BQ13066 116 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 GAGE2EQ4V326 116 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 C2orf83Q53S99 150 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 ZFP2Q6ZN57 461 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 TMEM219Q86XT9 240 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 NPIPB3Q92617 1050 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 TPPP3Q9BW30 176 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 ZNF492Q9P255 531 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 GAGE2DQ9UEU5 116 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 ZNF688P0C7X2 276 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 PRB4P10163 310 aaPredicted RBP12.37□□□□□ -0.43
RTN1-209ENST00000611068 PATE2Q6UY27 113 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 HIST1H4GQ99525 98 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 ASCL2Q99929 193 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 MRPL32Q9BYC8 188 aaKnown RBP12.37□□□□□ -0.43
RTN1-209ENST00000611068 TEX15Q9BXT5 2789 aa12.37□□□□□ -0.43
RTN1-209ENST00000611068 GCN1Q92616 2671 aaKnown RBP12.36□□□□□ -0.43
RTN1-209ENST00000611068 UBE2E1P51965 193 aa12.36□□□□□ -0.43
RTN1-209ENST00000611068 PIFOQ8TCI5 191 aa12.36□□□□□ -0.43
RTN1-209ENST00000611068 DLX4Q92988 240 aaPredicted RBP12.36□□□□□ -0.43
RTN1-209ENST00000611068 TLN2Q9Y4G6 2542 aa12.36□□□□□ -0.43
RTN1-209ENST00000611068 TEN1Q86WV5 123 aa12.36□□□□□ -0.43
RTN1-209ENST00000611068 TEX22C9J3V5 150 aa12.35□□□□□ -0.43
RTN1-209ENST00000611068 NPFFO15130 113 aa12.35□□□□□ -0.43
RTN1-209ENST00000611068 AVPP01185 164 aa12.35□□□□□ -0.43
RTN1-209ENST00000611068 CD69Q07108 199 aa12.35□□□□□ -0.43
RTN1-209ENST00000611068 ZC2HC1BQ5TFG8 222 aa12.35□□□□□ -0.43
RTN1-209ENST00000611068 PRRC2AP48634 2157 aaKnown RBP12.35□□□□□ -0.43
RTN1-209ENST00000611068 COX7A2P2O60397 106 aa12.35□□□□□ -0.43
RTN1-209ENST00000611068 IFITM1P13164 125 aa12.35□□□□□ -0.43
RTN1-209ENST00000611068 RNF223E7ERA6 249 aa12.34□□□□□ -0.43
RTN1-209ENST00000611068 TTC32Q5I0X7 151 aa12.34□□□□□ -0.43
RTN1-209ENST00000611068 MEIG1Q5JSS6 88 aa12.34□□□□□ -0.43
RTN1-209ENST00000611068 SMKR1H3BMG3 65 aa12.34□□□□□ -0.43
RTN1-209ENST00000611068 EVI2AP22794 236 aa12.34□□□□□ -0.43
RTN1-209ENST00000611068 NDPQ00604 133 aa12.34□□□□□ -0.43
RTN1-209ENST00000611068 Q6ZQT7 251 aa12.34□□□□□ -0.43
RTN1-209ENST00000611068 ZMAT4Q9H898 229 aa12.34□□□□□ -0.43
RTN1-209ENST00000611068 CSDC2Q9Y534 153 aaKnown RBP12.34□□□□□ -0.43
RTN1-209ENST00000611068 ITPR2Q14571 2701 aa12.33□□□□□ -0.44
RTN1-209ENST00000611068 PLA2G2AP14555 144 aa12.33□□□□□ -0.44
RTN1-209ENST00000611068 C10orf113Q5VZT2 155 aa12.33□□□□□ -0.44
RTN1-209ENST00000611068 AMN1Q8IY45 258 aa12.33□□□□□ -0.44
RTN1-209ENST00000611068 MAP1LC3AQ9H492 121 aa12.33□□□□□ -0.44
RTN1-209ENST00000611068 LOC107984156A0A0G2JMH3 177 aa12.33□□□□□ -0.44
RTN1-209ENST00000611068 ZNF785A8K8V0 405 aa12.33□□□□□ -0.44
RTN1-209ENST00000611068 MSMBP08118 114 aa12.33□□□□□ -0.44
RTN1-209ENST00000611068 SUB1P53999 127 aaKnown RBP eCLIP12.33□□□□□ -0.44
RTN1-209ENST00000611068 RIGQ13278 110 aa12.33□□□□□ -0.44
RTN1-209ENST00000611068 ARL17AQ8IVW1 177 aa12.33□□□□□ -0.44
RTN1-209ENST00000611068 TMEM158Q8WZ71 300 aa12.33□□□□□ -0.44
RTN1-209ENST00000611068 IGKCP01834 107 aa12.32□□□□□ -0.44
RTN1-209ENST00000611068 TRBV7-3A0A075B6L6 115 aa12.32□□□□□ -0.44
RTN1-209ENST00000611068 IGHV3-23P01764 117 aa12.32□□□□□ -0.44
RTN1-209ENST00000611068 LY6EQ16553 131 aa12.32□□□□□ -0.44
RTN1-209ENST00000611068 MINOS1Q5TGZ0 78 aa12.32□□□□□ -0.44
RTN1-209ENST00000611068 SPXQ9BT56 116 aa12.32□□□□□ -0.44
RTN1-209ENST00000611068 MINOS1-NBL1R4GNA1 71 aa12.32□□□□□ -0.44
RTN1-209ENST00000611068 TMEM213A2RRL7 107 aa12.31□□□□□ -0.44
RTN1-209ENST00000611068 TGFAP01135 160 aa12.31□□□□□ -0.44
RTN1-209ENST00000611068 ANKRD29Q8N6D5 301 aa12.31□□□□□ -0.44
RTN1-209ENST00000611068 LINC00527Q9UJ94 153 aa12.31□□□□□ -0.44
RTN1-209ENST00000611068 MXRA5Q9NR99 2828 aa12.31□□□□□ -0.44
RTN1-209ENST00000611068 HECTD1Q9ULT8 2610 aa12.31□□□□□ -0.44
RTN1-209ENST00000611068 FMC1Q96HJ9 113 aa12.31□□□□□ -0.44
RTN1-209ENST00000611068 HOXA3O43365 443 aaPredicted RBP12.3□□□□□ -0.44
RTN1-209ENST00000611068 SNCGO76070 127 aa12.3□□□□□ -0.44
RTN1-209ENST00000611068 IL4P05112 153 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms