RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 TMEM256Q8N2U0 113 aa9.43□□□□□ -0.9
CTSA-213ENST00000606782 C8orf49Q96NF6 230 aa9.43□□□□□ -0.9
CTSA-213ENST00000606782 NDFIP1Q9BT67 221 aa9.43□□□□□ -0.9
CTSA-213ENST00000606782 MLST8Q9BVC4 326 aa9.43□□□□□ -0.9
CTSA-213ENST00000606782 A0A1B0GVY2 172 aa9.42□□□□□ -0.9
CTSA-213ENST00000606782 PLAC8L1A1L4L8 177 aa9.42□□□□□ -0.9
CTSA-213ENST00000606782 ZNF705GA8MUZ8 300 aaPredicted RBP9.42□□□□□ -0.9
CTSA-213ENST00000606782 H7BYZ3 331 aa9.42□□□□□ -0.9
CTSA-213ENST00000606782 J3KRW8 73 aa9.42□□□□□ -0.9
CTSA-213ENST00000606782 SRP19P09132 144 aaKnown RBP9.42□□□□□ -0.9
CTSA-213ENST00000606782 DAD1P61803 113 aa9.42□□□□□ -0.9
CTSA-213ENST00000606782 SRSF3P84103 164 aaKnown RBP9.42□□□□□ -0.9
CTSA-213ENST00000606782 PEA15Q15121 130 aa9.42□□□□□ -0.9
CTSA-213ENST00000606782 Q6ZQT7 251 aa9.42□□□□□ -0.9
CTSA-213ENST00000606782 Q86TA4 180 aa9.42□□□□□ -0.9
CTSA-213ENST00000606782 BAGE2Q86Y30 109 aa9.42□□□□□ -0.9
CTSA-213ENST00000606782 TMEM183AQ8IXX5 376 aa9.42□□□□□ -0.9
CTSA-213ENST00000606782 DERL1Q9BUN8 251 aa9.42□□□□□ -0.9
CTSA-213ENST00000606782 RAB19A4D1S5 217 aa9.41□□□□□ -0.9
CTSA-213ENST00000606782 C9JQL5 133 aa9.41□□□□□ -0.9
CTSA-213ENST00000606782 PRM2P04554 102 aa9.41□□□□□ -0.9
CTSA-213ENST00000606782 CRIP1P50238 77 aa9.41□□□□□ -0.9
CTSA-213ENST00000606782 SMUG1Q53HV7 270 aa9.41□□□□□ -0.9
CTSA-213ENST00000606782 Q6ZR54 194 aa9.41□□□□□ -0.9
CTSA-213ENST00000606782 LINC01587Q99440 93 aa9.41□□□□□ -0.9
CTSA-213ENST00000606782 LINC00467Q9BRT7 94 aa9.41□□□□□ -0.9
CTSA-213ENST00000606782 DNAH17Q9UFH2 4485 aa9.41□□□□□ -0.9
CTSA-213ENST00000606782 RTL8CO15255 209 aa9.4□□□□□ -0.9
CTSA-213ENST00000606782 IGLV2-8P01709 118 aa9.4□□□□□ -0.9
CTSA-213ENST00000606782 AZU1P20160 251 aa9.4□□□□□ -0.9
CTSA-213ENST00000606782 ZNF80P51504 273 aaPredicted RBP9.4□□□□□ -0.9
CTSA-213ENST00000606782 TMEM88Q6PEY1 159 aa9.4□□□□□ -0.9
CTSA-213ENST00000606782 C15orf53Q8NAA6 179 aa9.4□□□□□ -0.9
CTSA-213ENST00000606782 FAT2Q9NYQ8 4349 aa9.4□□□□□ -0.9
CTSA-213ENST00000606782 TRBV20OR9-2A0A075B6H5 130 aa9.39□□□□□ -0.91
CTSA-213ENST00000606782 TRAV21A0A0B4J279 112 aa9.39□□□□□ -0.91
CTSA-213ENST00000606782 FABP5P3A8MUU1 101 aa9.39□□□□□ -0.91
CTSA-213ENST00000606782 GCGP01275 180 aa9.39□□□□□ -0.91
CTSA-213ENST00000606782 FAM3BP58499 235 aaPredicted RBP9.39□□□□□ -0.91
CTSA-213ENST00000606782 ZNF674Q2M3X9 581 aa9.39□□□□□ -0.91
CTSA-213ENST00000606782 ZNF493Q6ZR52 646 aa9.39□□□□□ -0.91
CTSA-213ENST00000606782 ZC2HC1AQ96GY0 325 aa9.39□□□□□ -0.91
CTSA-213ENST00000606782 PYGO2Q9BRQ0 406 aa9.39□□□□□ -0.91
CTSA-213ENST00000606782 NACAE9PAV3 2078 aa9.39□□□□□ -0.91
CTSA-213ENST00000606782 IGHV1OR15-1A0A075B7D0 117 aa9.38□□□□□ -0.91
CTSA-213ENST00000606782 LINC00862A6NCI5 91 aa9.38□□□□□ -0.91
CTSA-213ENST00000606782 C9JCJ5 164 aa9.38□□□□□ -0.91
CTSA-213ENST00000606782 PFN1P07737 140 aaKnown RBP9.38□□□□□ -0.91
CTSA-213ENST00000606782 HTN3P15516 51 aa9.38□□□□□ -0.91
CTSA-213ENST00000606782 ANXA2RQ3ZCQ2 193 aa9.38□□□□□ -0.91
CTSA-213ENST00000606782 SMIM12Q96EX1 92 aa9.38□□□□□ -0.91
CTSA-213ENST00000606782 PARLQ9H300 379 aa9.38□□□□□ -0.91
CTSA-213ENST00000606782 DNAH2Q9P225 4427 aa9.37□□□□□ -0.91
CTSA-213ENST00000606782 HERC2O95714 4834 aa9.37□□□□□ -0.91
CTSA-213ENST00000606782 CBY3A6NI87 242 aa9.37□□□□□ -0.91
CTSA-213ENST00000606782 GNG4P50150 75 aa9.37□□□□□ -0.91
CTSA-213ENST00000606782 TDRG1Q3Y452 100 aa9.37□□□□□ -0.91
CTSA-213ENST00000606782 CENPWQ5EE01 88 aa9.37□□□□□ -0.91
CTSA-213ENST00000606782 UBE2DNLQ8IWF7 75 aa9.37□□□□□ -0.91
CTSA-213ENST00000606782 EIF4E3Q8N5X7 224 aaKnown RBP9.37□□□□□ -0.91
CTSA-213ENST00000606782 OCC1Q8TAD7 63 aa9.37□□□□□ -0.91
CTSA-213ENST00000606782 RNASE8Q8TDE3 154 aaKnown RBP9.37□□□□□ -0.91
CTSA-213ENST00000606782 C16orf74Q96GX8 76 aa9.37□□□□□ -0.91
CTSA-213ENST00000606782 C11orf21Q9P2W6 132 aa9.37□□□□□ -0.91
CTSA-213ENST00000606782 TIMM8BQ9Y5J9 83 aaPredicted RBP9.37□□□□□ -0.91
CTSA-213ENST00000606782 PRSS29PA6NIE9 313 aa9.36□□□□□ -0.91
CTSA-213ENST00000606782 M0R2N4 97 aa9.36□□□□□ -0.91
CTSA-213ENST00000606782 DEFB130BP0DP73 79 aa9.36□□□□□ -0.91
CTSA-213ENST00000606782 DEFB130AP0DP74 79 aa9.36□□□□□ -0.91
CTSA-213ENST00000606782 HTN1P15515 57 aa9.36□□□□□ -0.91
CTSA-213ENST00000606782 FAM74A3Q4VXF1 159 aa9.36□□□□□ -0.91
CTSA-213ENST00000606782 FAM162BQ5T6X4 162 aa9.36□□□□□ -0.91
CTSA-213ENST00000606782 ZNF575Q86XF7 245 aa9.36□□□□□ -0.91
CTSA-213ENST00000606782 LINC00612Q8N6U2 182 aa9.36□□□□□ -0.91
CTSA-213ENST00000606782 NHLRC2Q8NBF2 726 aa9.36□□□□□ -0.91
CTSA-213ENST00000606782 TMEM263Q8WUH6 116 aaKnown RBP9.36□□□□□ -0.91
CTSA-213ENST00000606782 LY96Q9Y6Y9 160 aa9.36□□□□□ -0.91
CTSA-213ENST00000606782 ATP5G1P05496 136 aa9.35□□□□□ -0.91
CTSA-213ENST00000606782 CEBPGP53567 150 aa9.35□□□□□ -0.91
CTSA-213ENST00000606782 MUC21Q5SSG8 566 aa9.35□□□□□ -0.91
CTSA-213ENST00000606782 UQCC3Q6UW78 93 aa9.35□□□□□ -0.91
CTSA-213ENST00000606782 FAM159AQ6UWV7 190 aa9.35□□□□□ -0.91
CTSA-213ENST00000606782 KRTAP17-1Q9BYP8 105 aa9.35□□□□□ -0.91
CTSA-213ENST00000606782 TP53TG3Q9ULZ0 132 aa9.35□□□□□ -0.91
CTSA-213ENST00000606782 PKHD1P08F94 4074 aa9.35□□□□□ -0.91
CTSA-213ENST00000606782 IGLV2-18A0A075B6J9 118 aa9.34□□□□□ -0.91
CTSA-213ENST00000606782 IGKV3D-20A0A0C4DH25 116 aa9.34□□□□□ -0.91
CTSA-213ENST00000606782 PGPEP1LA6NFU8 196 aa9.34□□□□□ -0.91
CTSA-213ENST00000606782 ZNF727A8MUV8 499 aa9.34□□□□□ -0.91
CTSA-213ENST00000606782 GNRH2O43555 120 aa9.34□□□□□ -0.91
CTSA-213ENST00000606782 SH2D1AO60880 128 aa9.34□□□□□ -0.91
CTSA-213ENST00000606782 SOHLH1Q5JUK2 328 aa9.34□□□□□ -0.91
CTSA-213ENST00000606782 KCNS1Q96KK3 526 aa9.34□□□□□ -0.91
CTSA-213ENST00000606782 SMIM7Q9BQ49 75 aa9.34□□□□□ -0.91
CTSA-213ENST00000606782 BIN3Q9NQY0 253 aa9.34□□□□□ -0.91
CTSA-213ENST00000606782 C19orf71A6NCJ1 209 aa9.33□□□□□ -0.92
CTSA-213ENST00000606782 F5H768 121 aa9.33□□□□□ -0.92
CTSA-213ENST00000606782 K7EN84 100 aa9.33□□□□□ -0.92
CTSA-213ENST00000606782 TMEM241Q24JQ0 296 aa9.33□□□□□ -0.92
CTSA-213ENST00000606782 C11orf72Q8NBR9 251 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms