RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 WIPF1O43516 503 aa9.11□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 CACNG7P62955 275 aa9.11□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 ODF3L2Q3SX64 289 aa9.11□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 DMRTA1Q5VZB9 504 aa9.11□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 ZNF575Q86XF7 245 aa9.11□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 ZNF747Q9BV97 191 aa9.11□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 CYSRT1A8MQ03 144 aa9.1□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 ZNF324O75467 553 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 GZMBP10144 247 aa9.1□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 HIST2H2BDQ6DRA6 164 aa9.1□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 LYZL1Q6UWQ5 148 aa9.1□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 ZFP82Q8N141 532 aa9.1□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 LINC00467Q9BRT7 94 aa9.1□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 C11orf21Q9P2W6 132 aa9.1□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 LOC105371267A0A1B0GV96 52 aa9.09□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 UBE2CO00762 179 aa9.09□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 APCSP02743 223 aa9.09□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 ARMS2P0C7Q2 107 aa9.09□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 PRB4P10163 310 aaPredicted RBP9.09□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 RNASE4P34096 147 aaKnown RBP9.09□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 ASIPP42127 132 aa9.09□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 DEFB1P60022 68 aa9.09□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 OR10J3Q5JRS4 329 aa9.09□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 WFDC9Q8NEX5 89 aa9.09□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 TMEM158Q8WZ71 300 aa9.09□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 SELENOKQ9Y6D0 94 aa9.09□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 SPINK4O60575 86 aa9.08□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 CD33P20138 364 aa9.08□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 RAB4BP61018 213 aa9.08□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 NUTF2P61970 127 aaKnown RBP9.08□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 Q0VG73 95 aa9.08□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 KRTAP24-1Q3LI83 254 aa9.08□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 GFI1BQ5VTD9 330 aa9.08□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 FAM159AQ6UWV7 190 aa9.08□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 TRPT1Q86TN4 253 aaKnown RBP9.08□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 SCRT2Q9NQ03 307 aa9.08□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 TEP1Q99973 2627 aaKnown RBP9.07□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 TMSB15BA0A087X1C1 80 aa9.07□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 NXPH4O95158 308 aa9.07□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 HOXA5P20719 270 aa9.07□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 CAMPP49913 170 aa9.07□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 ANXA2RQ3ZCQ2 193 aa9.07□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 SHISA2Q6UWI4 295 aa9.07□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 STHQ8IWL8 128 aa9.07□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 TMEM256Q8N2U0 113 aa9.07□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 TMEM191AQ9H0A3 160 aa9.07□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 TP53TG3Q9ULZ0 132 aa9.07□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 TRGV11A0A075B6L2 103 aa9.06□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 KNCNA6PVL3 124 aa9.06□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 FRMD6-AS1P0C7T7 363 aa9.06□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 SLAQ13239 276 aa9.06□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 SPINK13Q1W4C9 94 aa9.06□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 C19orf73Q9NVV2 129 aa9.06□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 IGHV1OR15-1A0A075B7D0 117 aa9.05□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 LOC102724200A0A096LPH7 203 aaPredicted RBP9.05□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 M0R2Z0 102 aa9.05□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 CRXO43186 299 aaPredicted RBP9.05□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 INSP01308 110 aa9.05□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 ESDP10768 282 aa9.05□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 NTF3P20783 257 aa9.05□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 S100A4P26447 101 aaKnown RBP9.05□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 SNRPEP62304 92 aaKnown RBP9.05□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 PIK3CD-AS1Q5SR53 167 aa9.05□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 MORN3Q6PF18 240 aaPredicted RBP9.05□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 TPPP3Q9BW30 176 aa9.05□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 TRAV12-3A0A0B4J271 114 aa9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 GRIFINA4D1Z8 144 aa9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 RBMY1BA6NDE4 496 aaKnown RBP9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 RBMY1EA6NEQ0 496 aaKnown RBP9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 PPBPP02775 128 aa9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 RBMY1DP0C7P1 496 aaKnown RBP9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 RNASE3P12724 160 aaKnown RBP9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 NDUFA6P56556 154 aa9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 FAM104BQ5XKR9 115 aa9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 SMIM15Q7Z3B0 74 aa9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 PTH2Q96A98 100 aa9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 PACRGQ96M98 296 aaPredicted RBP9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 C9orf85Q96MD7 179 aa9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 ALKBH7Q9BT30 221 aaPredicted RBP9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 NDUFAF3Q9BU61 184 aa9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 C1QTNF4Q9BXJ3 329 aa9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 NAGKQ9UJ70 344 aa9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 LAMTOR2Q9Y2Q5 125 aa9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 MUC4Q99102 2169 aa9.04□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 H3BVH4 76 aa9.03□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 J3KRW8 73 aa9.03□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 SRIP30626 198 aa9.03□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 KIR3DS1Q14943 382 aa9.03□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 TWIST1Q15672 202 aa9.03□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 SPANXN1Q5VSR9 72 aa9.03□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 GTSCR1Q86UQ5 136 aa9.03□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 PRIMA1Q86XR5 153 aa9.03□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 U3KQK5 164 aa9.03□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 JMJD1CQ15652 2540 aa9.03□□□□□ -0.96
NEDD8-MDP1-203ENST00000604306 IGHV3-16A0A0C4DH30 117 aa9.02□□□□□ -0.97
NEDD8-MDP1-203ENST00000604306 IGKV3-20P01619 116 aa9.02□□□□□ -0.97
NEDD8-MDP1-203ENST00000604306 CD7P09564 240 aa9.02□□□□□ -0.97
NEDD8-MDP1-203ENST00000604306 MUC21Q5SSG8 566 aa9.02□□□□□ -0.97
NEDD8-MDP1-203ENST00000604306 Q6ZQT7 251 aa9.02□□□□□ -0.97
NEDD8-MDP1-203ENST00000604306 C3orf56Q8N813 242 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms