RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 TCTAP57738 103 aa14.14□□□□□ -0.15
SSBP4-210ENST00000601444 TDRG1Q3Y452 100 aa14.14□□□□□ -0.15
SSBP4-210ENST00000601444 TRGV1A0A0A0MS02 117 aa14.13□□□□□ -0.15
SSBP4-210ENST00000601444 F5H768 121 aa14.13□□□□□ -0.15
SSBP4-210ENST00000601444 SPINK4O60575 86 aa14.13□□□□□ -0.15
SSBP4-210ENST00000601444 ZNF415Q09FC8 603 aa14.13□□□□□ -0.15
SSBP4-210ENST00000601444 TMEM88Q6PEY1 159 aa14.13□□□□□ -0.15
SSBP4-210ENST00000601444 TCEAL7Q9BRU2 100 aa14.13□□□□□ -0.15
SSBP4-210ENST00000601444 NDUFAF3Q9BU61 184 aa14.13□□□□□ -0.15
SSBP4-210ENST00000601444 TYMSP04818 313 aa14.12□□□□□ -0.15
SSBP4-210ENST00000601444 PFN1P07737 140 aaKnown RBP14.12□□□□□ -0.15
SSBP4-210ENST00000601444 AKR1C3P42330 323 aa14.12□□□□□ -0.15
SSBP4-210ENST00000601444 UBE2G1P62253 170 aa14.12□□□□□ -0.15
SSBP4-210ENST00000601444 FMC1Q96HJ9 113 aa14.12□□□□□ -0.15
SSBP4-210ENST00000601444 MRPL16Q9NX20 251 aaKnown RBP14.12□□□□□ -0.15
SSBP4-210ENST00000601444 TRGV11A0A075B6L2 103 aa14.11□□□□□ -0.15
SSBP4-210ENST00000601444 IGHV3-16A0A0C4DH30 117 aa14.11□□□□□ -0.15
SSBP4-210ENST00000601444 HOXA5P20719 270 aa14.11□□□□□ -0.15
SSBP4-210ENST00000601444 CRIP1P50238 77 aa14.11□□□□□ -0.15
SSBP4-210ENST00000601444 ZC2HC1AQ96GY0 325 aa14.11□□□□□ -0.15
SSBP4-210ENST00000601444 MANBALQ9NQG1 85 aa14.11□□□□□ -0.15
SSBP4-210ENST00000601444 TEX46H3BTG2 121 aa14.1□□□□□ -0.15
SSBP4-210ENST00000601444 LGALS9CQ6DKI2 356 aa14.1□□□□□ -0.15
SSBP4-210ENST00000601444 SDF2L1Q9HCN8 221 aa14.1□□□□□ -0.15
SSBP4-210ENST00000601444 VPS13DQ5THJ4 4388 aa14.1□□□□□ -0.15
SSBP4-210ENST00000601444 TRGV2A0A075B6R0 118 aa14.09□□□□□ -0.15
SSBP4-210ENST00000601444 TRBV6-1A0A0K0K1D8 114 aa14.09□□□□□ -0.15
SSBP4-210ENST00000601444 LTAP01374 205 aa14.09□□□□□ -0.15
SSBP4-210ENST00000601444 NHLRC2Q8NBF2 726 aa14.09□□□□□ -0.15
SSBP4-210ENST00000601444 KCNS1Q96KK3 526 aa14.09□□□□□ -0.15
SSBP4-210ENST00000601444 FAM210BQ96KR6 192 aa14.09□□□□□ -0.15
SSBP4-210ENST00000601444 ZFP30Q9Y2G7 519 aa14.09□□□□□ -0.15
SSBP4-210ENST00000601444 OR5I1Q13606 314 aa14.08□□□□□ -0.16
SSBP4-210ENST00000601444 LGALS9BQ3B8N2 356 aa14.08□□□□□ -0.16
SSBP4-210ENST00000601444 COX8CQ7Z4L0 72 aa14.08□□□□□ -0.16
SSBP4-210ENST00000601444 IGKV3D-20A0A0C4DH25 116 aa14.07□□□□□ -0.16
SSBP4-210ENST00000601444 FABP5P3A8MUU1 101 aa14.07□□□□□ -0.16
SSBP4-210ENST00000601444 C18orf15Q96N68 181 aa14.07□□□□□ -0.16
SSBP4-210ENST00000601444 DERL1Q9BUN8 251 aa14.07□□□□□ -0.16
SSBP4-210ENST00000601444 IGHV3-53P01767 116 aa14.06□□□□□ -0.16
SSBP4-210ENST00000601444 SPXQ9BT56 116 aa14.06□□□□□ -0.16
SSBP4-210ENST00000601444 SH2D1AO60880 128 aa14.05□□□□□ -0.16
SSBP4-210ENST00000601444 TRAV26-1A0A087WT03 109 aa14.04□□□□□ -0.16
SSBP4-210ENST00000601444 A0A0J9YY99 117 aa14.04□□□□□ -0.16
SSBP4-210ENST00000601444 IFNA1P01562 189 aa14.04□□□□□ -0.16
SSBP4-210ENST00000601444 S100A9P06702 114 aaKnown RBP14.04□□□□□ -0.16
SSBP4-210ENST00000601444 BCL2P10415 239 aa14.04□□□□□ -0.16
SSBP4-210ENST00000601444 RPL35P42766 123 aaKnown RBP14.04□□□□□ -0.16
SSBP4-210ENST00000601444 BLOC1S1P78537 153 aa14.04□□□□□ -0.16
SSBP4-210ENST00000601444 MEF2BQ02080 365 aaPredicted RBP14.04□□□□□ -0.16
SSBP4-210ENST00000601444 ZNF674Q2M3X9 581 aa14.04□□□□□ -0.16
SSBP4-210ENST00000601444 BAGE2Q86Y30 109 aa14.04□□□□□ -0.16
SSBP4-210ENST00000601444 RASL10AQ92737 203 aa14.04□□□□□ -0.16
SSBP4-210ENST00000601444 C11orf52Q96A22 123 aa14.04□□□□□ -0.16
SSBP4-210ENST00000601444 M0R036 132 aa14.03□□□□□ -0.16
SSBP4-210ENST00000601444 M0R2P5 195 aa14.03□□□□□ -0.16
SSBP4-210ENST00000601444 NUDT3O95989 172 aa14.03□□□□□ -0.16
SSBP4-210ENST00000601444 ORM1P02763 201 aa14.03□□□□□ -0.16
SSBP4-210ENST00000601444 RNASE3P12724 160 aaKnown RBP14.03□□□□□ -0.16
SSBP4-210ENST00000601444 FAM162BQ5T6X4 162 aa14.03□□□□□ -0.16
SSBP4-210ENST00000601444 ZNF575Q86XF7 245 aa14.03□□□□□ -0.16
SSBP4-210ENST00000601444 POM121L12Q8N7R1 296 aa14.03□□□□□ -0.16
SSBP4-210ENST00000601444 MLST8Q9BVC4 326 aa14.03□□□□□ -0.16
SSBP4-210ENST00000601444 VAX2Q9UIW0 290 aa14.03□□□□□ -0.16
SSBP4-210ENST00000601444 KMT2AQ03164 3969 aa14.03□□□□□ -0.16
SSBP4-210ENST00000601444 KRBOX1C9JBD0 128 aa14.02□□□□□ -0.17
SSBP4-210ENST00000601444 SFTA3P0C7M3 94 aa14.02□□□□□ -0.17
SSBP4-210ENST00000601444 C15orf53Q8NAA6 179 aa14.02□□□□□ -0.17
SSBP4-210ENST00000601444 LYPD6BQ8NI32 183 aa14.02□□□□□ -0.17
SSBP4-210ENST00000601444 C9orf85Q96MD7 179 aa14.02□□□□□ -0.17
SSBP4-210ENST00000601444 TXNDC17Q9BRA2 123 aa14.02□□□□□ -0.17
SSBP4-210ENST00000601444 RAB19A4D1S5 217 aa14.01□□□□□ -0.17
SSBP4-210ENST00000601444 B4DEV8 164 aa14.01□□□□□ -0.17
SSBP4-210ENST00000601444 C9JCJ5 164 aa14.01□□□□□ -0.17
SSBP4-210ENST00000601444 ZNF479Q96JC4 524 aa14.01□□□□□ -0.17
SSBP4-210ENST00000601444 TMSB15BA0A087X1C1 80 aa14□□□□□ -0.17
SSBP4-210ENST00000601444 GRIFINA4D1Z8 144 aa14□□□□□ -0.17
SSBP4-210ENST00000601444 PDE6DO43924 150 aa14□□□□□ -0.17
SSBP4-210ENST00000601444 P0DMU3 169 aa14□□□□□ -0.17
SSBP4-210ENST00000601444 FAM231AP0DMU4 169 aa14□□□□□ -0.17
SSBP4-210ENST00000601444 FAM231CP0DMU5 169 aa14□□□□□ -0.17
SSBP4-210ENST00000601444 FHL2Q14192 279 aa14□□□□□ -0.17
SSBP4-210ENST00000601444 VSIG2Q96IQ7 327 aa14□□□□□ -0.17
SSBP4-210ENST00000601444 MED9Q9NWA0 146 aa14□□□□□ -0.17
SSBP4-210ENST00000601444 PGPEP1LA6NFU8 196 aa13.99□□□□□ -0.17
SSBP4-210ENST00000601444 CENPWQ5EE01 88 aa13.99□□□□□ -0.17
SSBP4-210ENST00000601444 PCNPQ8WW12 178 aaKnown RBP13.99□□□□□ -0.17
SSBP4-210ENST00000601444 IGLV2-8P01709 118 aa13.98□□□□□ -0.17
SSBP4-210ENST00000601444 ASIPP42127 132 aa13.98□□□□□ -0.17
SSBP4-210ENST00000601444 ZNF876PQ49A33 203 aa13.98□□□□□ -0.17
SSBP4-210ENST00000601444 PRR27Q6MZM9 219 aa13.98□□□□□ -0.17
SSBP4-210ENST00000601444 RBFOX3A6NFN3 312 aa13.97□□□□□ -0.17
SSBP4-210ENST00000601444 S100A4P26447 101 aaKnown RBP13.97□□□□□ -0.17
SSBP4-210ENST00000601444 RPL19P84098 196 aaKnown RBP13.97□□□□□ -0.17
SSBP4-210ENST00000601444 LINC01559Q495D7 138 aa13.97□□□□□ -0.17
SSBP4-210ENST00000601444 TRBV20OR9-2A0A075B6H5 130 aa13.96□□□□□ -0.17
SSBP4-210ENST00000601444 TRAV4A0A0B4J268 109 aa13.96□□□□□ -0.17
SSBP4-210ENST00000601444 H3BVH4 76 aa13.96□□□□□ -0.17
SSBP4-210ENST00000601444 TAGLN2P37802 199 aaKnown RBP13.96□□□□□ -0.17
SSBP4-210ENST00000601444 ZNF506Q5JVG8 444 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms