RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 FMC1Q96HJ9 113 aa12.2□□□□□ -0.46
SHKBP1-212ENST00000596163 C18orf15Q96N68 181 aa12.2□□□□□ -0.46
SHKBP1-212ENST00000596163 SDF2L1Q9HCN8 221 aa12.2□□□□□ -0.46
SHKBP1-212ENST00000596163 ZFP30Q9Y2G7 519 aa12.2□□□□□ -0.46
SHKBP1-212ENST00000596163 LYSTQ99698 3801 aa12.2□□□□□ -0.46
SHKBP1-212ENST00000596163 SACSQ9NZJ4 4579 aa12.19□□□□□ -0.46
SHKBP1-212ENST00000596163 ALMS1Q8TCU4 4167 aa12.19□□□□□ -0.46
SHKBP1-212ENST00000596163 TRAV34A0A0B4J273 112 aa12.19□□□□□ -0.46
SHKBP1-212ENST00000596163 S100A9P06702 114 aaKnown RBP12.19□□□□□ -0.46
SHKBP1-212ENST00000596163 PFN1P07737 140 aaKnown RBP12.19□□□□□ -0.46
SHKBP1-212ENST00000596163 Q6ZTI0 123 aa12.19□□□□□ -0.46
SHKBP1-212ENST00000596163 LINC00479Q96M42 142 aa12.19□□□□□ -0.46
SHKBP1-212ENST00000596163 C8orf49Q96NF6 230 aa12.19□□□□□ -0.46
SHKBP1-212ENST00000596163 A0A1B0GVG6 124 aa12.18□□□□□ -0.46
SHKBP1-212ENST00000596163 AKR1C3P42330 323 aa12.18□□□□□ -0.46
SHKBP1-212ENST00000596163 OR5I1Q13606 314 aa12.18□□□□□ -0.46
SHKBP1-212ENST00000596163 MANBALQ9NQG1 85 aa12.18□□□□□ -0.46
SHKBP1-212ENST00000596163 TRBV6-1A0A0K0K1D8 114 aa12.17□□□□□ -0.46
SHKBP1-212ENST00000596163 FABP5P3A8MUU1 101 aa12.17□□□□□ -0.46
SHKBP1-212ENST00000596163 Q86TA4 180 aa12.17□□□□□ -0.46
SHKBP1-212ENST00000596163 TXNDC17Q9BRA2 123 aa12.17□□□□□ -0.46
SHKBP1-212ENST00000596163 MDFICQ9P1T7 246 aa12.17□□□□□ -0.46
SHKBP1-212ENST00000596163 GNRH2O43555 120 aa12.16□□□□□ -0.46
SHKBP1-212ENST00000596163 ZNF80P51504 273 aaPredicted RBP12.16□□□□□ -0.46
SHKBP1-212ENST00000596163 RYR2Q92736 4967 aa12.15□□□□□ -0.46
SHKBP1-212ENST00000596163 IGHV3-16A0A0C4DH30 117 aa12.15□□□□□ -0.46
SHKBP1-212ENST00000596163 IFNA1P01562 189 aa12.15□□□□□ -0.46
SHKBP1-212ENST00000596163 TYMSP04818 313 aa12.15□□□□□ -0.46
SHKBP1-212ENST00000596163 MRPL16Q9NX20 251 aaKnown RBP12.15□□□□□ -0.46
SHKBP1-212ENST00000596163 GNG13Q9P2W3 67 aa12.15□□□□□ -0.46
SHKBP1-212ENST00000596163 DNAH1Q9P2D7 4330 aa12.15□□□□□ -0.46
SHKBP1-212ENST00000596163 M0R2P5 195 aa12.14□□□□□ -0.47
SHKBP1-212ENST00000596163 SLAQ13239 276 aa12.14□□□□□ -0.47
SHKBP1-212ENST00000596163 COX8CQ7Z4L0 72 aa12.14□□□□□ -0.47
SHKBP1-212ENST00000596163 UBE2DNLQ8IWF7 75 aa12.14□□□□□ -0.47
SHKBP1-212ENST00000596163 POM121L12Q8N7R1 296 aa12.14□□□□□ -0.47
SHKBP1-212ENST00000596163 RASL10AQ92737 203 aa12.14□□□□□ -0.47
SHKBP1-212ENST00000596163 NUDT3O95989 172 aa12.13□□□□□ -0.47
SHKBP1-212ENST00000596163 CCL20P78556 96 aa12.13□□□□□ -0.47
SHKBP1-212ENST00000596163 RNF212Q495C1 297 aa12.13□□□□□ -0.47
SHKBP1-212ENST00000596163 TRAV26-1A0A087WT03 109 aa12.12□□□□□ -0.47
SHKBP1-212ENST00000596163 H3BNG1 76 aa12.12□□□□□ -0.47
SHKBP1-212ENST00000596163 LTAP01374 205 aa12.12□□□□□ -0.47
SHKBP1-212ENST00000596163 HOXA5P20719 270 aa12.12□□□□□ -0.47
SHKBP1-212ENST00000596163 TAGLN2P37802 199 aaKnown RBP12.12□□□□□ -0.47
SHKBP1-212ENST00000596163 BLOC1S1P78537 153 aa12.12□□□□□ -0.47
SHKBP1-212ENST00000596163 FAM162BQ5T6X4 162 aa12.12□□□□□ -0.47
SHKBP1-212ENST00000596163 C11orf21Q9P2W6 132 aa12.12□□□□□ -0.47
SHKBP1-212ENST00000596163 SCO2A0A1W2PP80 73 aa12.11□□□□□ -0.47
SHKBP1-212ENST00000596163 ORM1P02763 201 aa12.11□□□□□ -0.47
SHKBP1-212ENST00000596163 ZC2HC1AQ96GY0 325 aa12.11□□□□□ -0.47
SHKBP1-212ENST00000596163 S100A4P26447 101 aaKnown RBP12.1□□□□□ -0.47
SHKBP1-212ENST00000596163 NKX2-5P52952 324 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-212ENST00000596163 FAM3BP58499 235 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-212ENST00000596163 BAGE2Q86Y30 109 aa12.1□□□□□ -0.47
SHKBP1-212ENST00000596163 A0A0J9YY99 117 aa12.09□□□□□ -0.47
SHKBP1-212ENST00000596163 PDE6DO43924 150 aa12.09□□□□□ -0.47
SHKBP1-212ENST00000596163 IGHV3-53P01767 116 aa12.09□□□□□ -0.47
SHKBP1-212ENST00000596163 CCL18P55774 89 aa12.09□□□□□ -0.47
SHKBP1-212ENST00000596163 ALKAL2Q6UX46 152 aa12.09□□□□□ -0.47
SHKBP1-212ENST00000596163 PTH2Q96A98 100 aa12.09□□□□□ -0.47
SHKBP1-212ENST00000596163 PRO0255Q9UI72 69 aa12.09□□□□□ -0.47
SHKBP1-212ENST00000596163 TRAV4A0A0B4J268 109 aa12.08□□□□□ -0.48
SHKBP1-212ENST00000596163 IGKV3D-20A0A0C4DH25 116 aa12.08□□□□□ -0.48
SHKBP1-212ENST00000596163 TRGV4A0A0C4DH28 118 aa12.08□□□□□ -0.48
SHKBP1-212ENST00000596163 B4DEV8 164 aa12.08□□□□□ -0.48
SHKBP1-212ENST00000596163 SH2D1AO60880 128 aa12.08□□□□□ -0.48
SHKBP1-212ENST00000596163 ASIPP42127 132 aa12.08□□□□□ -0.48
SHKBP1-212ENST00000596163 CRIP1P50238 77 aa12.08□□□□□ -0.48
SHKBP1-212ENST00000596163 MEF2BQ02080 365 aaPredicted RBP12.08□□□□□ -0.48
SHKBP1-212ENST00000596163 ZNF674Q2M3X9 581 aa12.08□□□□□ -0.48
SHKBP1-212ENST00000596163 OR4C5Q8NGB2 326 aa12.08□□□□□ -0.48
SHKBP1-212ENST00000596163 C11orf52Q96A22 123 aa12.08□□□□□ -0.48
SHKBP1-212ENST00000596163 VAX2Q9UIW0 290 aa12.08□□□□□ -0.48
SHKBP1-212ENST00000596163 HHLA3Q9XRX5 114 aa12.08□□□□□ -0.48
SHKBP1-212ENST00000596163 C9JCJ5 164 aa12.07□□□□□ -0.48
SHKBP1-212ENST00000596163 PAX4O43316 350 aa12.07□□□□□ -0.48
SHKBP1-212ENST00000596163 CIDEAO60543 219 aa12.07□□□□□ -0.48
SHKBP1-212ENST00000596163 BCL2P10415 239 aa12.07□□□□□ -0.48
SHKBP1-212ENST00000596163 ZNF876PQ49A33 203 aa12.07□□□□□ -0.48
SHKBP1-212ENST00000596163 C9orf85Q96MD7 179 aa12.07□□□□□ -0.48
SHKBP1-212ENST00000596163 KRBOX1C9JBD0 128 aa12.06□□□□□ -0.48
SHKBP1-212ENST00000596163 RPL35P42766 123 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-212ENST00000596163 FHL2Q14192 279 aa12.06□□□□□ -0.48
SHKBP1-212ENST00000596163 LINC01559Q495D7 138 aa12.05□□□□□ -0.48
SHKBP1-212ENST00000596163 DNLZQ5SXM8 178 aa12.05□□□□□ -0.48
SHKBP1-212ENST00000596163 NHLRC2Q8NBF2 726 aa12.05□□□□□ -0.48
SHKBP1-212ENST00000596163 VSIG2Q96IQ7 327 aa12.05□□□□□ -0.48
SHKBP1-212ENST00000596163 ZNF479Q96JC4 524 aa12.05□□□□□ -0.48
SHKBP1-212ENST00000596163 MLST8Q9BVC4 326 aa12.05□□□□□ -0.48
SHKBP1-212ENST00000596163 MED9Q9NWA0 146 aa12.05□□□□□ -0.48
SHKBP1-212ENST00000596163 IL36BQ9NZH7 164 aa12.05□□□□□ -0.48
SHKBP1-212ENST00000596163 BOLA1Q9Y3E2 137 aa12.05□□□□□ -0.48
SHKBP1-212ENST00000596163 M0R036 132 aa12.04□□□□□ -0.48
SHKBP1-212ENST00000596163 SFTA3P0C7M3 94 aa12.04□□□□□ -0.48
SHKBP1-212ENST00000596163 RNASE3P12724 160 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-212ENST00000596163 CRYBA4P53673 196 aa12.04□□□□□ -0.48
SHKBP1-212ENST00000596163 PIK3CD-AS1Q5SR53 167 aa12.04□□□□□ -0.48
SHKBP1-212ENST00000596163 ICOSQ9Y6W8 199 aa12.04□□□□□ -0.48
SHKBP1-212ENST00000596163 VPS13DQ5THJ4 4388 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms