RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 YPEL4Q96NS1 127 aa8.73□□□□□ -1.01
DDX39A-219ENST00000592927 CLUHP3Q96NS8 147 aa8.73□□□□□ -1.01
DDX39A-219ENST00000592927 HLA-DRB4X5D2U9 266 aa8.73□□□□□ -1.01
DDX39A-219ENST00000592927 TRBV24-1A0A075B6N3 115 aa8.72□□□□□ -1.01
DDX39A-219ENST00000592927 XKRY2A2RUG3 117 aa8.72□□□□□ -1.01
DDX39A-219ENST00000592927 COLCA2A8K830 154 aa8.72□□□□□ -1.01
DDX39A-219ENST00000592927 SH2D1AO60880 128 aa8.72□□□□□ -1.01
DDX39A-219ENST00000592927 ZNF705DP0CH99 300 aaPredicted RBP8.72□□□□□ -1.01
DDX39A-219ENST00000592927 ZNF705BP0CI00 300 aaPredicted RBP8.72□□□□□ -1.01
DDX39A-219ENST00000592927 TSPOP30536 169 aa8.72□□□□□ -1.01
DDX39A-219ENST00000592927 APOC4P55056 127 aa8.72□□□□□ -1.01
DDX39A-219ENST00000592927 DEFB1P60022 68 aa8.72□□□□□ -1.01
DDX39A-219ENST00000592927 RPS20P60866 119 aaKnown RBP8.72□□□□□ -1.01
DDX39A-219ENST00000592927 GDF5OSQ5U4N7 250 aa8.72□□□□□ -1.01
DDX39A-219ENST00000592927 SBSPONQ8IVN8 264 aa8.72□□□□□ -1.01
DDX39A-219ENST00000592927 TSKUQ8WUA8 353 aa8.72□□□□□ -1.01
DDX39A-219ENST00000592927 GFRA4Q9GZZ7 299 aa8.72□□□□□ -1.01
DDX39A-219ENST00000592927 TRAV21A0A0B4J279 112 aa8.71□□□□□ -1.02
DDX39A-219ENST00000592927 SMIM27A0A1W2PRY6 76 aa8.71□□□□□ -1.02
DDX39A-219ENST00000592927 H3BMM0 161 aa8.71□□□□□ -1.02
DDX39A-219ENST00000592927 GPX1P07203 203 aa8.71□□□□□ -1.02
DDX39A-219ENST00000592927 TRPT1Q86TN4 253 aaKnown RBP8.71□□□□□ -1.02
DDX39A-219ENST00000592927 ZFAND2AQ8N6M9 145 aa8.71□□□□□ -1.02
DDX39A-219ENST00000592927 PYGO2Q9BRQ0 406 aa8.71□□□□□ -1.02
DDX39A-219ENST00000592927 URGCP-MRPS24S4R325 110 aa8.71□□□□□ -1.02
DDX39A-219ENST00000592927 PLECQ15149 4684 aaKnown RBP8.71□□□□□ -1.02
DDX39A-219ENST00000592927 KIR2DL5BA0A0G2JN68 375 aa8.7□□□□□ -1.02
DDX39A-219ENST00000592927 KIR2DL5BA0A0G2JPC4 375 aa8.7□□□□□ -1.02
DDX39A-219ENST00000592927 TMEM189A5PLL7 270 aa8.7□□□□□ -1.02
DDX39A-219ENST00000592927 KLLNB2CW77 178 aa8.7□□□□□ -1.02
DDX39A-219ENST00000592927 IGKV3-20P01619 116 aa8.7□□□□□ -1.02
DDX39A-219ENST00000592927 ZNF80P51504 273 aaPredicted RBP8.7□□□□□ -1.02
DDX39A-219ENST00000592927 LINC01559Q495D7 138 aa8.7□□□□□ -1.02
DDX39A-219ENST00000592927 Q6AWC8 147 aa8.7□□□□□ -1.02
DDX39A-219ENST00000592927 KIR2DL5AQ8N109 375 aa8.7□□□□□ -1.02
DDX39A-219ENST00000592927 OR2D3Q8NGH3 330 aa8.7□□□□□ -1.02
DDX39A-219ENST00000592927 KIR2DL5BQ8NHK3 375 aa8.7□□□□□ -1.02
DDX39A-219ENST00000592927 CSTL1Q9H114 145 aa8.7□□□□□ -1.02
DDX39A-219ENST00000592927 NAT8BQ9UHF3 227 aa8.7□□□□□ -1.02
DDX39A-219ENST00000592927 KIAA1109Q2LD37 5005 aa8.7□□□□□ -1.02
DDX39A-219ENST00000592927 A0A1W2PPQ1 181 aa8.69□□□□□ -1.02
DDX39A-219ENST00000592927 UBE2CO00762 179 aa8.69□□□□□ -1.02
DDX39A-219ENST00000592927 CXCL1P09341 107 aa8.69□□□□□ -1.02
DDX39A-219ENST00000592927 CDKN1BP46527 198 aa8.69□□□□□ -1.02
DDX39A-219ENST00000592927 FOXA3P55318 350 aaPredicted RBP8.69□□□□□ -1.02
DDX39A-219ENST00000592927 FAM3BP58499 235 aaPredicted RBP8.69□□□□□ -1.02
DDX39A-219ENST00000592927 NUTF2P61970 127 aaKnown RBP8.69□□□□□ -1.02
DDX39A-219ENST00000592927 MORN3Q6PF18 240 aaPredicted RBP8.69□□□□□ -1.02
DDX39A-219ENST00000592927 FAM210BQ96KR6 192 aa8.69□□□□□ -1.02
DDX39A-219ENST00000592927 AGRNO00468 2067 aa8.69□□□□□ -1.02
DDX39A-219ENST00000592927 CA1P00915 261 aaPredicted RBP8.68□□□□□ -1.02
DDX39A-219ENST00000592927 AMBPP02760 352 aa8.68□□□□□ -1.02
DDX39A-219ENST00000592927 ORM1P02763 201 aa8.68□□□□□ -1.02
DDX39A-219ENST00000592927 TYMSP04818 313 aa8.68□□□□□ -1.02
DDX39A-219ENST00000592927 COX19Q49B96 90 aa8.68□□□□□ -1.02
DDX39A-219ENST00000592927 AMTNQ6UX39 209 aa8.68□□□□□ -1.02
DDX39A-219ENST00000592927 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.68□□□□□ -1.02
DDX39A-219ENST00000592927 NEU1Q99519 415 aa8.68□□□□□ -1.02
DDX39A-219ENST00000592927 TGIF2-C20orf24A0A0A6YYL0 155 aa8.67□□□□□ -1.02
DDX39A-219ENST00000592927 C7orf71A4D174 169 aa8.67□□□□□ -1.02
DDX39A-219ENST00000592927 HIGD1CA8MV81 97 aa8.67□□□□□ -1.02
DDX39A-219ENST00000592927 RAB5AP20339 215 aa8.67□□□□□ -1.02
DDX39A-219ENST00000592927 RNASE4P34096 147 aaKnown RBP8.67□□□□□ -1.02
DDX39A-219ENST00000592927 PRR9Q5T870 116 aa8.67□□□□□ -1.02
DDX39A-219ENST00000592927 ATP5L2Q7Z4Y8 100 aa8.67□□□□□ -1.02
DDX39A-219ENST00000592927 NUP35Q8NFH5 326 aa8.67□□□□□ -1.02
DDX39A-219ENST00000592927 ALMS1Q8TCU4 4167 aa8.67□□□□□ -1.02
DDX39A-219ENST00000592927 ZMAT4Q9H898 229 aa8.67□□□□□ -1.02
DDX39A-219ENST00000592927 TCL1AP56279 114 aa8.66□□□□□ -1.02
DDX39A-219ENST00000592927 RASL11AQ6T310 242 aa8.66□□□□□ -1.02
DDX39A-219ENST00000592927 Q6ZWC4 215 aa8.66□□□□□ -1.02
DDX39A-219ENST00000592927 KCNS1Q96KK3 526 aa8.66□□□□□ -1.02
DDX39A-219ENST00000592927 C20orf144Q9BQM9 153 aa8.66□□□□□ -1.02
DDX39A-219ENST00000592927 SPATA25Q9BR10 227 aa8.66□□□□□ -1.02
DDX39A-219ENST00000592927 TM2D3Q9BRN9 247 aa8.66□□□□□ -1.02
DDX39A-219ENST00000592927 C1QTNF4Q9BXJ3 329 aa8.66□□□□□ -1.02
DDX39A-219ENST00000592927 EDA2RQ9HAV5 297 aa8.66□□□□□ -1.02
DDX39A-219ENST00000592927 IGKV3D-20A0A0C4DH25 116 aa8.65□□□□□ -1.02
DDX39A-219ENST00000592927 J3KRW8 73 aa8.65□□□□□ -1.02
DDX39A-219ENST00000592927 ZNF324O75467 553 aaPredicted RBP8.65□□□□□ -1.02
DDX39A-219ENST00000592927 FXYD7P58549 80 aa8.65□□□□□ -1.02
DDX39A-219ENST00000592927 SPINK13Q1W4C9 94 aa8.65□□□□□ -1.02
DDX39A-219ENST00000592927 DNLZQ5SXM8 178 aa8.65□□□□□ -1.02
DDX39A-219ENST00000592927 GFI1BQ5VTD9 330 aa8.65□□□□□ -1.02
DDX39A-219ENST00000592927 GTSF1Q8WW33 167 aa8.65□□□□□ -1.02
DDX39A-219ENST00000592927 BORCS7Q96B45 105 aa8.65□□□□□ -1.02
DDX39A-219ENST00000592927 TMSB15BA0A087X1C1 80 aa8.64□□□□□ -1.03
DDX39A-219ENST00000592927 A0A1B0GW15 77 aa8.64□□□□□ -1.03
DDX39A-219ENST00000592927 F2Z2F3 143 aa8.64□□□□□ -1.03
DDX39A-219ENST00000592927 M0R2Z0 102 aa8.64□□□□□ -1.03
DDX39A-219ENST00000592927 SPRY2O43597 315 aa8.64□□□□□ -1.03
DDX39A-219ENST00000592927 GIG44P09565 113 aaPredicted RBP8.64□□□□□ -1.03
DDX39A-219ENST00000592927 IGLC6P0CF74 106 aa8.64□□□□□ -1.03
DDX39A-219ENST00000592927 GZMBP10144 247 aa8.64□□□□□ -1.03
DDX39A-219ENST00000592927 RPS10P46783 165 aaKnown RBP8.64□□□□□ -1.03
DDX39A-219ENST00000592927 DEFB135Q30KP9 77 aa8.64□□□□□ -1.03
DDX39A-219ENST00000592927 WDR73Q6P4I2 378 aa8.64□□□□□ -1.03
DDX39A-219ENST00000592927 FAM159AQ6UWV7 190 aa8.64□□□□□ -1.03
DDX39A-219ENST00000592927 C11orf21Q9P2W6 132 aa8.64□□□□□ -1.03
DDX39A-219ENST00000592927 XCL2Q9UBD3 114 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms