RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 USP54Q70EL1 1684 aa0.69□□□□□ -2.3
SMAD4-207ENST00000589076 PBRM1Q86U86 1689 aa0.69□□□□□ -2.3
SMAD4-207ENST00000589076 ERCC6Q03468 1493 aa0.69□□□□□ -2.3
SMAD4-207ENST00000589076 C5orf67F2Z3F1 127 aa0.69□□□□□ -2.3
SMAD4-207ENST00000589076 G0S2P27469 103 aa0.69□□□□□ -2.3
SMAD4-207ENST00000589076 GNG10P50151 68 aa0.69□□□□□ -2.3
SMAD4-207ENST00000589076 BORCS8Q96FH0 119 aa0.69□□□□□ -2.3
SMAD4-207ENST00000589076 TCEAL2Q9H3H9 227 aaPredicted RBP0.69□□□□□ -2.3
SMAD4-207ENST00000589076 MED11Q9P086 117 aa0.69□□□□□ -2.3
SMAD4-207ENST00000589076 RNF11Q9Y3C5 154 aa0.69□□□□□ -2.3
SMAD4-207ENST00000589076 FRAS1Q86XX4 4008 aa0.69□□□□□ -2.3
SMAD4-207ENST00000589076 ZMYM4Q5VZL5 1548 aa0.69□□□□□ -2.3
SMAD4-207ENST00000589076 LRRC7Q96NW7 1537 aa0.69□□□□□ -2.3
SMAD4-207ENST00000589076 SPTBP11277 2137 aa0.68□□□□□ -2.3
SMAD4-207ENST00000589076 HSPG2P98160 4391 aa0.68□□□□□ -2.3
SMAD4-207ENST00000589076 A0A096LPI6 279 aa0.68□□□□□ -2.3
SMAD4-207ENST00000589076 ANK1P16157 1881 aa0.68□□□□□ -2.3
SMAD4-207ENST00000589076 SPATA45Q537H7 98 aa0.68□□□□□ -2.3
SMAD4-207ENST00000589076 SBSPONQ8IVN8 264 aa0.68□□□□□ -2.3
SMAD4-207ENST00000589076 OR10AC1Q8NH08 325 aa0.68□□□□□ -2.3
SMAD4-207ENST00000589076 DYDC1Q8WWB3 177 aa0.68□□□□□ -2.3
SMAD4-207ENST00000589076 WFDC10AQ9H1F0 79 aa0.68□□□□□ -2.3
SMAD4-207ENST00000589076 NUBP2Q9Y5Y2 271 aa0.68□□□□□ -2.3
SMAD4-207ENST00000589076 LRP1Q07954 4544 aaKnown RBP0.68□□□□□ -2.3
SMAD4-207ENST00000589076 TANC2Q9HCD6 1990 aa0.68□□□□□ -2.3
SMAD4-207ENST00000589076 MUC4Q99102 2169 aa0.67□□□□□ -2.3
SMAD4-207ENST00000589076 TRDV1A0A1B0GX56 115 aa0.67□□□□□ -2.3
SMAD4-207ENST00000589076 MAP1LC3B2A6NCE7 125 aa0.67□□□□□ -2.3
SMAD4-207ENST00000589076 KPNA4O00629 521 aaPredicted RBP0.67□□□□□ -2.3
SMAD4-207ENST00000589076 PFDN1O60925 122 aa0.67□□□□□ -2.3
SMAD4-207ENST00000589076 MT-ND6P03923 174 aa0.67□□□□□ -2.3
SMAD4-207ENST00000589076 S100A5P33763 92 aa0.67□□□□□ -2.3
SMAD4-207ENST00000589076 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
SMAD4-207ENST00000589076 DCUN1D2Q6PH85 259 aa0.67□□□□□ -2.3
SMAD4-207ENST00000589076 ISOC1Q96CN7 298 aa0.67□□□□□ -2.3
SMAD4-207ENST00000589076 OTORQ9NRC9 128 aa0.67□□□□□ -2.3
SMAD4-207ENST00000589076 FER1L6Q2WGJ9 1857 aa0.67□□□□□ -2.3
SMAD4-207ENST00000589076 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.67□□□□□ -2.3
SMAD4-207ENST00000589076 PKHD1P08F94 4074 aa0.66□□□□□ -2.3
SMAD4-207ENST00000589076 IGHV3-33P01772 117 aa0.66□□□□□ -2.3
SMAD4-207ENST00000589076 TMEM78Q5T7P6 136 aa0.66□□□□□ -2.3
SMAD4-207ENST00000589076 LINC00299Q6ZSB3 139 aa0.66□□□□□ -2.3
SMAD4-207ENST00000589076 OR4B1Q8NGF8 309 aa0.66□□□□□ -2.3
SMAD4-207ENST00000589076 CARD19Q96LW7 228 aa0.66□□□□□ -2.3
SMAD4-207ENST00000589076 PCBD2Q9H0N5 130 aa0.66□□□□□ -2.3
SMAD4-207ENST00000589076 CST11Q9H112 138 aa0.66□□□□□ -2.3
SMAD4-207ENST00000589076 LRTM1Q9HBL6 345 aa0.66□□□□□ -2.3
SMAD4-207ENST00000589076 ATPIF1Q9UII2 106 aa0.66□□□□□ -2.3
SMAD4-207ENST00000589076 TPRKBQ9Y3C4 175 aa0.66□□□□□ -2.3
SMAD4-207ENST00000589076 TCOF1Q13428 1488 aaKnown RBP0.66□□□□□ -2.3
SMAD4-207ENST00000589076 CACNA1EQ15878 2313 aa0.65□□□□□ -2.3
SMAD4-207ENST00000589076 PTPRQQ9UMZ3 2332 aa0.65□□□□□ -2.3
SMAD4-207ENST00000589076 LRP2P98164 4655 aa0.65□□□□□ -2.31
SMAD4-207ENST00000589076 CHD7Q9P2D1 2997 aa0.65□□□□□ -2.31
SMAD4-207ENST00000589076 NEFHP12036 1026 aa0.65□□□□□ -2.31
SMAD4-207ENST00000589076 FABP4P15090 132 aa0.65□□□□□ -2.31
SMAD4-207ENST00000589076 MRPS36P82909 103 aaKnown RBP0.65□□□□□ -2.31
SMAD4-207ENST00000589076 MIR22HGQ0VDD5 57 aa0.65□□□□□ -2.31
SMAD4-207ENST00000589076 VMA21Q3ZAQ7 101 aa0.65□□□□□ -2.31
SMAD4-207ENST00000589076 FOXI2Q6ZQN5 318 aa0.65□□□□□ -2.31
SMAD4-207ENST00000589076 STX12Q86Y82 276 aa0.65□□□□□ -2.31
SMAD4-207ENST00000589076 OR4C12Q96R67 309 aa0.65□□□□□ -2.31
SMAD4-207ENST00000589076 EFCAB11Q9BUY7 163 aa0.65□□□□□ -2.31
SMAD4-207ENST00000589076 NAT8BQ9UHF3 227 aa0.65□□□□□ -2.31
SMAD4-207ENST00000589076 LAMTOR2Q9Y2Q5 125 aa0.65□□□□□ -2.31
SMAD4-207ENST00000589076 V9GYQ6 96 aa0.65□□□□□ -2.31
SMAD4-207ENST00000589076 ATG2AQ2TAZ0 1938 aa0.65□□□□□ -2.31
SMAD4-207ENST00000589076 RIMS1Q86UR5 1692 aaKnown RBP0.65□□□□□ -2.31
SMAD4-207ENST00000589076 MYH1P12882 1939 aa0.64□□□□□ -2.31
SMAD4-207ENST00000589076 TRAV23DV6A0A075B6W5 121 aa0.64□□□□□ -2.31
SMAD4-207ENST00000589076 GABARAPH6UMI1 98 aa0.64□□□□□ -2.31
SMAD4-207ENST00000589076 BCL2P10415 239 aa0.64□□□□□ -2.31
SMAD4-207ENST00000589076 FABP2P12104 132 aa0.64□□□□□ -2.31
SMAD4-207ENST00000589076 DIAPH2-AS1Q14236 149 aa0.64□□□□□ -2.31
SMAD4-207ENST00000589076 GLIPR1L1Q6UWM5 242 aa0.64□□□□□ -2.31
SMAD4-207ENST00000589076 ANGPTL5Q86XS5 388 aa0.64□□□□□ -2.31
SMAD4-207ENST00000589076 LINC00269Q8N2A0 174 aa0.64□□□□□ -2.31
SMAD4-207ENST00000589076 CCL4L1Q8NHW4 92 aa0.64□□□□□ -2.31
SMAD4-207ENST00000589076 DIRC1Q969H9 104 aa0.64□□□□□ -2.31
SMAD4-207ENST00000589076 CCDC32Q9BV29 185 aa0.64□□□□□ -2.31
SMAD4-207ENST00000589076 PTPRMP28827 1452 aa0.64□□□□□ -2.31
SMAD4-207ENST00000589076 BCORL1Q5H9F3 1711 aa0.64□□□□□ -2.31
SMAD4-207ENST00000589076 DLC1Q96QB1 1528 aa0.64□□□□□ -2.31
SMAD4-207ENST00000589076 E7EQ34 232 aa0.63□□□□□ -2.31
SMAD4-207ENST00000589076 H7BYZ3 331 aa0.63□□□□□ -2.31
SMAD4-207ENST00000589076 CENPHQ9H3R5 247 aa0.63□□□□□ -2.31
SMAD4-207ENST00000589076 TAF9BQ9HBM6 251 aa0.63□□□□□ -2.31
SMAD4-207ENST00000589076 NINQ8N4C6 2090 aa0.63□□□□□ -2.31
SMAD4-207ENST00000589076 ALMS1Q8TCU4 4167 aa0.62□□□□□ -2.31
SMAD4-207ENST00000589076 STARD9Q9P2P6 4700 aa0.62□□□□□ -2.31
SMAD4-207ENST00000589076 DYNC1H1Q14204 4646 aaKnown RBP0.62□□□□□ -2.31
SMAD4-207ENST00000589076 A0A1B0GV72 72 aa0.62□□□□□ -2.31
SMAD4-207ENST00000589076 C5orf58C9J3I9 102 aa0.62□□□□□ -2.31
SMAD4-207ENST00000589076 FAM107AO95990 144 aa0.62□□□□□ -2.31
SMAD4-207ENST00000589076 CD14P08571 375 aa0.62□□□□□ -2.31
SMAD4-207ENST00000589076 S100A11P31949 105 aa0.62□□□□□ -2.31
SMAD4-207ENST00000589076 SDC2P34741 201 aa0.62□□□□□ -2.31
SMAD4-207ENST00000589076 FOXA3P55318 350 aaPredicted RBP0.62□□□□□ -2.31
SMAD4-207ENST00000589076 NDUFA6P56556 154 aa0.62□□□□□ -2.31
SMAD4-207ENST00000589076 CASC2Q6XLA1 102 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms