RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 HIST1H2BAQ96A08 127 aa13.47□□□□□ -0.25
CIRBP-217ENST00000588230 C8orf49Q96NF6 230 aa13.47□□□□□ -0.25
CIRBP-217ENST00000588230 MRPL16Q9NX20 251 aaKnown RBP13.47□□□□□ -0.25
CIRBP-217ENST00000588230 MDFICQ9P1T7 246 aa13.47□□□□□ -0.25
CIRBP-217ENST00000588230 TRAV34A0A0B4J273 112 aa13.46□□□□□ -0.25
CIRBP-217ENST00000588230 PEX7O00628 323 aa13.46□□□□□ -0.25
CIRBP-217ENST00000588230 SMUG1Q53HV7 270 aa13.46□□□□□ -0.25
CIRBP-217ENST00000588230 KCNS1Q96KK3 526 aa13.46□□□□□ -0.25
CIRBP-217ENST00000588230 LINC00479Q96M42 142 aa13.46□□□□□ -0.25
CIRBP-217ENST00000588230 C18orf15Q96N68 181 aa13.46□□□□□ -0.25
CIRBP-217ENST00000588230 FAT2Q9NYQ8 4349 aa13.45□□□□□ -0.26
CIRBP-217ENST00000588230 MUC4Q99102 2169 aa13.45□□□□□ -0.26
CIRBP-217ENST00000588230 TRAV26-1A0A087WT03 109 aa13.45□□□□□ -0.26
CIRBP-217ENST00000588230 A0A1B0GV50 99 aa13.45□□□□□ -0.26
CIRBP-217ENST00000588230 GCGP01275 180 aa13.45□□□□□ -0.26
CIRBP-217ENST00000588230 H2AFB1P0C5Y9 115 aa13.45□□□□□ -0.26
CIRBP-217ENST00000588230 HOXA5P20719 270 aa13.45□□□□□ -0.26
CIRBP-217ENST00000588230 RNF212Q495C1 297 aa13.45□□□□□ -0.26
CIRBP-217ENST00000588230 EIF5AL1Q6IS14 154 aaKnown RBP13.45□□□□□ -0.26
CIRBP-217ENST00000588230 SPXQ9BT56 116 aa13.45□□□□□ -0.26
CIRBP-217ENST00000588230 SDF2L1Q9HCN8 221 aa13.45□□□□□ -0.26
CIRBP-217ENST00000588230 GNRH2O43555 120 aa13.44□□□□□ -0.26
CIRBP-217ENST00000588230 ZNF80P51504 273 aaPredicted RBP13.44□□□□□ -0.26
CIRBP-217ENST00000588230 A0A0J9YY99 117 aa13.43□□□□□ -0.26
CIRBP-217ENST00000588230 PAGE4O60829 102 aa13.43□□□□□ -0.26
CIRBP-217ENST00000588230 TCEAL7Q9BRU2 100 aa13.43□□□□□ -0.26
CIRBP-217ENST00000588230 ARL2-SNX15V9GYD0 113 aa13.43□□□□□ -0.26
CIRBP-217ENST00000588230 IGHV3-16A0A0C4DH30 117 aa13.42□□□□□ -0.26
CIRBP-217ENST00000588230 TYMSP04818 313 aa13.42□□□□□ -0.26
CIRBP-217ENST00000588230 PFN1P07737 140 aaKnown RBP13.42□□□□□ -0.26
CIRBP-217ENST00000588230 DNAH17Q9UFH2 4485 aa13.42□□□□□ -0.26
CIRBP-217ENST00000588230 IGHV3-53P01767 116 aa13.41□□□□□ -0.26
CIRBP-217ENST00000588230 RAB5CP51148 216 aa13.41□□□□□ -0.26
CIRBP-217ENST00000588230 UBE2G1P62253 170 aa13.41□□□□□ -0.26
CIRBP-217ENST00000588230 Q86TA4 180 aa13.41□□□□□ -0.26
CIRBP-217ENST00000588230 H3BNG1 76 aa13.4□□□□□ -0.26
CIRBP-217ENST00000588230 CCL18P55774 89 aa13.4□□□□□ -0.26
CIRBP-217ENST00000588230 SLC51BQ86UW2 128 aa13.4□□□□□ -0.26
CIRBP-217ENST00000588230 RASL10AQ92737 203 aa13.4□□□□□ -0.26
CIRBP-217ENST00000588230 FMC1Q96HJ9 113 aa13.4□□□□□ -0.26
CIRBP-217ENST00000588230 C11orf21Q9P2W6 132 aa13.4□□□□□ -0.26
CIRBP-217ENST00000588230 M0R2P5 195 aa13.39□□□□□ -0.27
CIRBP-217ENST00000588230 FAM3BP58499 235 aaPredicted RBP13.39□□□□□ -0.27
CIRBP-217ENST00000588230 ZFP30Q9Y2G7 519 aa13.39□□□□□ -0.27
CIRBP-217ENST00000588230 NACAE9PAV3 2078 aa13.38□□□□□ -0.27
CIRBP-217ENST00000588230 FABP5P3A8MUU1 101 aa13.38□□□□□ -0.27
CIRBP-217ENST00000588230 AKR1C3P42330 323 aa13.38□□□□□ -0.27
CIRBP-217ENST00000588230 VSIG2Q96IQ7 327 aa13.38□□□□□ -0.27
CIRBP-217ENST00000588230 TEX46H3BTG2 121 aa13.37□□□□□ -0.27
CIRBP-217ENST00000588230 M0R2N4 97 aa13.37□□□□□ -0.27
CIRBP-217ENST00000588230 SULT1A2P50226 295 aa13.37□□□□□ -0.27
CIRBP-217ENST00000588230 SLAQ13239 276 aa13.37□□□□□ -0.27
CIRBP-217ENST00000588230 IGLV2-18A0A075B6J9 118 aa13.36□□□□□ -0.27
CIRBP-217ENST00000588230 TRAV1-1A0A0B4J248 108 aa13.36□□□□□ -0.27
CIRBP-217ENST00000588230 TRGV4A0A0C4DH28 118 aa13.36□□□□□ -0.27
CIRBP-217ENST00000588230 TRBV6-1A0A0K0K1D8 114 aa13.36□□□□□ -0.27
CIRBP-217ENST00000588230 PAX4O43316 350 aa13.36□□□□□ -0.27
CIRBP-217ENST00000588230 FHL2Q14192 279 aa13.36□□□□□ -0.27
CIRBP-217ENST00000588230 C9orf62Q8N4C0 152 aa13.36□□□□□ -0.27
CIRBP-217ENST00000588230 PRO0255Q9UI72 69 aa13.36□□□□□ -0.27
CIRBP-217ENST00000588230 S100A9P06702 114 aaKnown RBP13.35□□□□□ -0.27
CIRBP-217ENST00000588230 SFTA3P0C7M3 94 aa13.35□□□□□ -0.27
CIRBP-217ENST00000588230 CCL20P78556 96 aa13.35□□□□□ -0.27
CIRBP-217ENST00000588230 ZC2HC1AQ96GY0 325 aa13.35□□□□□ -0.27
CIRBP-217ENST00000588230 ZNF479Q96JC4 524 aa13.35□□□□□ -0.27
CIRBP-217ENST00000588230 MANBALQ9NQG1 85 aa13.35□□□□□ -0.27
CIRBP-217ENST00000588230 GNG13Q9P2W3 67 aa13.35□□□□□ -0.27
CIRBP-217ENST00000588230 HHLA3Q9XRX5 114 aa13.35□□□□□ -0.27
CIRBP-217ENST00000588230 LINC00588Q9Y4M8 146 aa13.35□□□□□ -0.27
CIRBP-217ENST00000588230 C9JCJ5 164 aa13.34□□□□□ -0.27
CIRBP-217ENST00000588230 LTAP01374 205 aa13.34□□□□□ -0.27
CIRBP-217ENST00000588230 ORM1P02763 201 aa13.34□□□□□ -0.27
CIRBP-217ENST00000588230 COX8CQ7Z4L0 72 aa13.34□□□□□ -0.27
CIRBP-217ENST00000588230 OR4C5Q8NGB2 326 aa13.34□□□□□ -0.27
CIRBP-217ENST00000588230 PKHD1P08F94 4074 aa13.33□□□□□ -0.28
CIRBP-217ENST00000588230 TRAV4A0A0B4J268 109 aa13.33□□□□□ -0.28
CIRBP-217ENST00000588230 IGKV3D-20A0A0C4DH25 116 aa13.33□□□□□ -0.28
CIRBP-217ENST00000588230 A0A1B0GVG6 124 aa13.33□□□□□ -0.28
CIRBP-217ENST00000588230 SCO2A0A1W2PP80 73 aa13.33□□□□□ -0.28
CIRBP-217ENST00000588230 S100A4P26447 101 aaKnown RBP13.33□□□□□ -0.28
CIRBP-217ENST00000588230 CRIP1P50238 77 aa13.33□□□□□ -0.28
CIRBP-217ENST00000588230 CRYBA4P53673 196 aa13.33□□□□□ -0.28
CIRBP-217ENST00000588230 ZNF876PQ49A33 203 aa13.33□□□□□ -0.28
CIRBP-217ENST00000588230 FAM162BQ5T6X4 162 aa13.33□□□□□ -0.28
CIRBP-217ENST00000588230 C9orf85Q96MD7 179 aa13.33□□□□□ -0.28
CIRBP-217ENST00000588230 A0A096LPF7 62 aa13.32□□□□□ -0.28
CIRBP-217ENST00000588230 SH2D1AO60880 128 aa13.32□□□□□ -0.28
CIRBP-217ENST00000588230 ICOSQ9Y6W8 199 aa13.32□□□□□ -0.28
CIRBP-217ENST00000588230 B4DEV8 164 aa13.31□□□□□ -0.28
CIRBP-217ENST00000588230 RNASE3P12724 160 aaKnown RBP13.31□□□□□ -0.28
CIRBP-217ENST00000588230 ASIPP42127 132 aa13.31□□□□□ -0.28
CIRBP-217ENST00000588230 ESRGQ1W209 222 aa13.31□□□□□ -0.28
CIRBP-217ENST00000588230 NHLRC2Q8NBF2 726 aa13.31□□□□□ -0.28
CIRBP-217ENST00000588230 ZNRF2Q8NHG8 242 aa13.31□□□□□ -0.28
CIRBP-217ENST00000588230 M0R036 132 aa13.3□□□□□ -0.28
CIRBP-217ENST00000588230 MRPL23Q16540 153 aaKnown RBP13.3□□□□□ -0.28
CIRBP-217ENST00000588230 Q6ZR54 194 aa13.3□□□□□ -0.28
CIRBP-217ENST00000588230 BAGE2Q86Y30 109 aa13.3□□□□□ -0.28
CIRBP-217ENST00000588230 TXNDC17Q9BRA2 123 aa13.3□□□□□ -0.28
CIRBP-217ENST00000588230 KRBOX1C9JBD0 128 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms