RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 CADP27708 2225 aa10.28□□□□□ -0.76
RNF43-208ENST00000584437 CR1LQ2VPA4 569 aa10.28□□□□□ -0.76
RNF43-208ENST00000584437 CFHR3Q02985 330 aa10.27□□□□□ -0.76
RNF43-208ENST00000584437 SLC25A29Q8N8R3 303 aa10.27□□□□□ -0.76
RNF43-208ENST00000584437 IGF2BP2-AS1Q96M15 143 aa10.27□□□□□ -0.76
RNF43-208ENST00000584437 Q9H8V8 135 aa10.27□□□□□ -0.77
RNF43-208ENST00000584437 PLA2G2EQ9NZK7 142 aa10.27□□□□□ -0.77
RNF43-208ENST00000584437 F5H768 121 aa10.27□□□□□ -0.77
RNF43-208ENST00000584437 H0YGX0 51 aa10.27□□□□□ -0.77
RNF43-208ENST00000584437 TAX1BP3O14907 124 aa10.27□□□□□ -0.77
RNF43-208ENST00000584437 BRWD3Q6RI45 1802 aa10.27□□□□□ -0.77
RNF43-208ENST00000584437 PLXNA4Q9HCM2 1894 aa10.27□□□□□ -0.77
RNF43-208ENST00000584437 HEATR5AQ86XA9 2040 aa10.27□□□□□ -0.77
RNF43-208ENST00000584437 GP9P14770 177 aa10.27□□□□□ -0.77
RNF43-208ENST00000584437 DIAPH2-AS1Q14236 149 aa10.26□□□□□ -0.77
RNF43-208ENST00000584437 LTBP1Q14766 1721 aa10.26□□□□□ -0.77
RNF43-208ENST00000584437 TCF20Q9UGU0 1960 aaKnown RBP10.26□□□□□ -0.77
RNF43-208ENST00000584437 A0A0B4J2C4 111 aa10.26□□□□□ -0.77
RNF43-208ENST00000584437 Q6ZSR3 168 aa10.26□□□□□ -0.77
RNF43-208ENST00000584437 LINC00173Q6ZV60 143 aa10.26□□□□□ -0.77
RNF43-208ENST00000584437 SMIM20Q8N5G0 67 aa10.26□□□□□ -0.77
RNF43-208ENST00000584437 VWA8A3KMH1 1905 aa10.25□□□□□ -0.77
RNF43-208ENST00000584437 GNLYP22749 145 aa10.25□□□□□ -0.77
RNF43-208ENST00000584437 IGFL3Q6UXB1 125 aa10.25□□□□□ -0.77
RNF43-208ENST00000584437 NBL1P41271 181 aa10.25□□□□□ -0.77
RNF43-208ENST00000584437 FOXE3Q13461 319 aa10.25□□□□□ -0.77
RNF43-208ENST00000584437 LINC01620Q4KN68 170 aa10.25□□□□□ -0.77
RNF43-208ENST00000584437 CRYGCP07315 174 aa10.25□□□□□ -0.77
RNF43-208ENST00000584437 ELANEP08246 267 aa10.24□□□□□ -0.77
RNF43-208ENST00000584437 ICOSQ9Y6W8 199 aa10.24□□□□□ -0.77
RNF43-208ENST00000584437 PKDREJQ9NTG1 2253 aa10.24□□□□□ -0.77
RNF43-208ENST00000584437 GNRH2O43555 120 aa10.24□□□□□ -0.77
RNF43-208ENST00000584437 FXYD2P54710 66 aa10.24□□□□□ -0.77
RNF43-208ENST00000584437 WFDC2Q14508 124 aa10.24□□□□□ -0.77
RNF43-208ENST00000584437 RNASE13Q5GAN3 156 aaKnown RBP10.24□□□□□ -0.77
RNF43-208ENST00000584437 A4D1N5 150 aa10.24□□□□□ -0.77
RNF43-208ENST00000584437 GATA1P15976 413 aaPredicted RBP10.24□□□□□ -0.77
RNF43-208ENST00000584437 FOXI1Q12951 378 aa10.24□□□□□ -0.77
RNF43-208ENST00000584437 J3KT08 172 aa10.23□□□□□ -0.77
RNF43-208ENST00000584437 ATP6V0E2Q8NHE4 81 aa10.23□□□□□ -0.77
RNF43-208ENST00000584437 F6UB75 175 aa10.23□□□□□ -0.77
RNF43-208ENST00000584437 LYPD6Q86Y78 171 aa10.23□□□□□ -0.77
RNF43-208ENST00000584437 MUSTN1Q8IVN3 82 aa10.23□□□□□ -0.77
RNF43-208ENST00000584437 DIDO1Q9BTC0 2240 aaKnown RBP10.22□□□□□ -0.77
RNF43-208ENST00000584437 DOCK8Q8NF50 2099 aa10.22□□□□□ -0.77
RNF43-208ENST00000584437 G3V4G9 280 aa10.22□□□□□ -0.77
RNF43-208ENST00000584437 C11orf53Q8IXP5 236 aa10.22□□□□□ -0.77
RNF43-208ENST00000584437 MYLKQ15746 1914 aa10.22□□□□□ -0.77
RNF43-208ENST00000584437 J3QLI3 93 aa10.22□□□□□ -0.77
RNF43-208ENST00000584437 IGFBPL1Q8WX77 278 aa10.22□□□□□ -0.77
RNF43-208ENST00000584437 RMI2Q96E14 147 aa10.22□□□□□ -0.77
RNF43-208ENST00000584437 RS1O15537 224 aa10.22□□□□□ -0.77
RNF43-208ENST00000584437 SPTAN1Q13813 2472 aaKnown RBP10.22□□□□□ -0.77
RNF43-208ENST00000584437 hADV29S1A0JD25 119 aa10.22□□□□□ -0.77
RNF43-208ENST00000584437 H3BQ85 93 aa10.22□□□□□ -0.77
RNF43-208ENST00000584437 ANGP03950 147 aaKnown RBP10.22□□□□□ -0.77
RNF43-208ENST00000584437 ZFP2Q6ZN57 461 aa10.22□□□□□ -0.77
RNF43-208ENST00000584437 CREBBPQ92793 2442 aa10.22□□□□□ -0.77
RNF43-208ENST00000584437 NDUFC2O95298 119 aa10.21□□□□□ -0.77
RNF43-208ENST00000584437 PATE2Q6UY27 113 aa10.21□□□□□ -0.78
RNF43-208ENST00000584437 TSC2P49815 1807 aa10.21□□□□□ -0.78
RNF43-208ENST00000584437 SPTBN2O15020 2390 aa10.21□□□□□ -0.78
RNF43-208ENST00000584437 FAM236AA0A1B0GUQ0 79 aa10.21□□□□□ -0.78
RNF43-208ENST00000584437 FAM236BA0A1B0GV22 79 aa10.21□□□□□ -0.78
RNF43-208ENST00000584437 APOC4P55056 127 aa10.21□□□□□ -0.78
RNF43-208ENST00000584437 ACACAQ13085 2346 aa10.21□□□□□ -0.78
RNF43-208ENST00000584437 E9PLD3 99 aa10.2□□□□□ -0.78
RNF43-208ENST00000584437 H3BT86 120 aa10.2□□□□□ -0.78
RNF43-208ENST00000584437 I3L2K1 104 aa10.2□□□□□ -0.78
RNF43-208ENST00000584437 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.2□□□□□ -0.78
RNF43-208ENST00000584437 A0A1B0GX51 115 aa10.2□□□□□ -0.78
RNF43-208ENST00000584437 IGKV2-29A2NJV5 120 aaPredicted RBP10.2□□□□□ -0.78
RNF43-208ENST00000584437 KRTAP27-1Q3LI81 207 aa10.2□□□□□ -0.78
RNF43-208ENST00000584437 RNF152Q8N8N0 203 aa10.2□□□□□ -0.78
RNF43-208ENST00000584437 RPL39LQ96EH5 51 aaKnown RBP10.2□□□□□ -0.78
RNF43-208ENST00000584437 CACNA1GO43497 2377 aa10.2□□□□□ -0.78
RNF43-208ENST00000584437 LY6G6EA0A0G2JKS1 128 aa10.2□□□□□ -0.78
RNF43-208ENST00000584437 IGHG2P01859 326 aa10.2□□□□□ -0.78
RNF43-208ENST00000584437 FAM167A-AS1Q96KT0 104 aa10.2□□□□□ -0.78
RNF43-208ENST00000584437 U3KQA8 63 aa10.2□□□□□ -0.78
RNF43-208ENST00000584437 GTSF1Q8WW33 167 aa10.2□□□□□ -0.78
RNF43-208ENST00000584437 TRBV10-2A0A0K0K1G8 114 aa10.19□□□□□ -0.78
RNF43-208ENST00000584437 IGKV1-17P01599 117 aa10.19□□□□□ -0.78
RNF43-208ENST00000584437 U3KQE9 123 aa10.19□□□□□ -0.78
RNF43-208ENST00000584437 A0A0J9YXV3 536 aa10.19□□□□□ -0.78
RNF43-208ENST00000584437 TRBV6-1A0A0K0K1D8 114 aa10.19□□□□□ -0.78
RNF43-208ENST00000584437 SND1-IT1Q9HBX3 110 aa10.19□□□□□ -0.78
RNF43-208ENST00000584437 ZNF407Q9C0G0 2248 aa10.18□□□□□ -0.78
RNF43-208ENST00000584437 C1orf43Q9BWL3 253 aa10.18□□□□□ -0.78
RNF43-208ENST00000584437 K7EIM0 57 aa10.18□□□□□ -0.78
RNF43-208ENST00000584437 FUSP35637 526 aaKnown RBP eCLIP10.18□□□□□ -0.78
RNF43-208ENST00000584437 TIMM17AQ99595 171 aa10.18□□□□□ -0.78
RNF43-208ENST00000584437 Q71RC1 249 aaPredicted RBP10.18□□□□□ -0.78
RNF43-208ENST00000584437 NPBQ8NG41 125 aa10.18□□□□□ -0.78
RNF43-208ENST00000584437 MSRB1Q9NZV6 116 aa10.18□□□□□ -0.78
RNF43-208ENST00000584437 TOMM6Q96B49 74 aa10.18□□□□□ -0.78
RNF43-208ENST00000584437 FGF23Q9GZV9 251 aaPredicted RBP10.18□□□□□ -0.78
RNF43-208ENST00000584437 TRAV4A0A0B4J268 109 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 RNF223E7ERA6 249 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 LHBP01229 141 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms