RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 C8orf49Q96NF6 230 aa9.74□□□□□ -0.85
GGA3-215ENST00000582821 TCEAL7Q9BRU2 100 aa9.74□□□□□ -0.85
GGA3-215ENST00000582821 DNAH2Q9P225 4427 aa9.73□□□□□ -0.85
GGA3-215ENST00000582821 IGHV3-16A0A0C4DH30 117 aa9.73□□□□□ -0.85
GGA3-215ENST00000582821 GNRH2O43555 120 aa9.73□□□□□ -0.85
GGA3-215ENST00000582821 PFDN1O60925 122 aa9.73□□□□□ -0.85
GGA3-215ENST00000582821 IFNA7P01567 189 aa9.73□□□□□ -0.85
GGA3-215ENST00000582821 TPT1P13693 172 aaKnown RBP9.73□□□□□ -0.85
GGA3-215ENST00000582821 ZNF80P51504 273 aaPredicted RBP9.73□□□□□ -0.85
GGA3-215ENST00000582821 LGALSLQ3ZCW2 172 aaPredicted RBP9.73□□□□□ -0.85
GGA3-215ENST00000582821 SMUG1Q53HV7 270 aa9.73□□□□□ -0.85
GGA3-215ENST00000582821 LINC00479Q96M42 142 aa9.73□□□□□ -0.85
GGA3-215ENST00000582821 MRPL16Q9NX20 251 aaKnown RBP9.73□□□□□ -0.85
GGA3-215ENST00000582821 DNAH17Q9UFH2 4485 aa9.72□□□□□ -0.85
GGA3-215ENST00000582821 PEX7O00628 323 aa9.72□□□□□ -0.85
GGA3-215ENST00000582821 GCGP01275 180 aa9.72□□□□□ -0.85
GGA3-215ENST00000582821 TYMSP04818 313 aa9.72□□□□□ -0.85
GGA3-215ENST00000582821 PFN1P07737 140 aaKnown RBP9.72□□□□□ -0.85
GGA3-215ENST00000582821 PPT1P50897 306 aa9.72□□□□□ -0.85
GGA3-215ENST00000582821 CCL18P55774 89 aa9.72□□□□□ -0.85
GGA3-215ENST00000582821 SLAQ13239 276 aa9.72□□□□□ -0.85
GGA3-215ENST00000582821 Q6ZR54 194 aa9.72□□□□□ -0.85
GGA3-215ENST00000582821 COX8CQ7Z4L0 72 aa9.72□□□□□ -0.85
GGA3-215ENST00000582821 SFT2D1Q8WV19 159 aa9.72□□□□□ -0.85
GGA3-215ENST00000582821 VSIG2Q96IQ7 327 aa9.72□□□□□ -0.85
GGA3-215ENST00000582821 SDF2L1Q9HCN8 221 aa9.72□□□□□ -0.85
GGA3-215ENST00000582821 NAGKQ9UJ70 344 aa9.72□□□□□ -0.85
GGA3-215ENST00000582821 TRAV34A0A0B4J273 112 aa9.71□□□□□ -0.86
GGA3-215ENST00000582821 A0A0J9YY99 117 aa9.71□□□□□ -0.86
GGA3-215ENST00000582821 M0R2P5 195 aa9.71□□□□□ -0.86
GGA3-215ENST00000582821 C1QBP02746 253 aa9.71□□□□□ -0.86
GGA3-215ENST00000582821 ZFP69Q49AA0 526 aa9.71□□□□□ -0.86
GGA3-215ENST00000582821 FAM213BQ8TBF2 198 aa9.71□□□□□ -0.86
GGA3-215ENST00000582821 C11orf21Q9P2W6 132 aa9.71□□□□□ -0.86
GGA3-215ENST00000582821 LINC00588Q9Y4M8 146 aa9.71□□□□□ -0.86
GGA3-215ENST00000582821 TRBV6-1A0A0K0K1D8 114 aa9.7□□□□□ -0.86
GGA3-215ENST00000582821 H2AFB1P0C5Y9 115 aa9.7□□□□□ -0.86
GGA3-215ENST00000582821 FHL2Q14192 279 aa9.7□□□□□ -0.86
GGA3-215ENST00000582821 PRO0255Q9UI72 69 aa9.7□□□□□ -0.86
GGA3-215ENST00000582821 ZFP30Q9Y2G7 519 aa9.7□□□□□ -0.86
GGA3-215ENST00000582821 A0A096LPF7 62 aa9.69□□□□□ -0.86
GGA3-215ENST00000582821 FABP5P3A8MUU1 101 aa9.69□□□□□ -0.86
GGA3-215ENST00000582821 PAGE4O60829 102 aa9.69□□□□□ -0.86
GGA3-215ENST00000582821 RAB5CP51148 216 aa9.69□□□□□ -0.86
GGA3-215ENST00000582821 CST9LP1Q5W188 147 aa9.69□□□□□ -0.86
GGA3-215ENST00000582821 EIF5AL1Q6IS14 154 aaKnown RBP9.69□□□□□ -0.86
GGA3-215ENST00000582821 LINC00336Q6ZUF6 198 aa9.69□□□□□ -0.86
GGA3-215ENST00000582821 ZNRF2Q8NHG8 242 aa9.69□□□□□ -0.86
GGA3-215ENST00000582821 PTH2Q96A98 100 aa9.69□□□□□ -0.86
GGA3-215ENST00000582821 FMC1Q96HJ9 113 aa9.69□□□□□ -0.86
GGA3-215ENST00000582821 HHLA3Q9XRX5 114 aa9.69□□□□□ -0.86
GGA3-215ENST00000582821 TRAV1-1A0A0B4J248 108 aa9.68□□□□□ -0.86
GGA3-215ENST00000582821 TRAV4A0A0B4J268 109 aa9.68□□□□□ -0.86
GGA3-215ENST00000582821 M0R2N4 97 aa9.68□□□□□ -0.86
GGA3-215ENST00000582821 PAX4O43316 350 aa9.68□□□□□ -0.86
GGA3-215ENST00000582821 IGHV3-53P01767 116 aa9.68□□□□□ -0.86
GGA3-215ENST00000582821 CRYBA4P53673 196 aa9.68□□□□□ -0.86
GGA3-215ENST00000582821 ESRGQ1W209 222 aa9.68□□□□□ -0.86
GGA3-215ENST00000582821 Q86TA4 180 aa9.68□□□□□ -0.86
GGA3-215ENST00000582821 FAT2Q9NYQ8 4349 aa9.67□□□□□ -0.86
GGA3-215ENST00000582821 IGLV2-18A0A075B6J9 118 aa9.67□□□□□ -0.86
GGA3-215ENST00000582821 CRIP1P50238 77 aa9.67□□□□□ -0.86
GGA3-215ENST00000582821 AKAP14Q86UN6 197 aa9.67□□□□□ -0.86
GGA3-215ENST00000582821 SLC51BQ86UW2 128 aa9.67□□□□□ -0.86
GGA3-215ENST00000582821 ZNF479Q96JC4 524 aa9.67□□□□□ -0.86
GGA3-215ENST00000582821 C9orf85Q96MD7 179 aa9.67□□□□□ -0.86
GGA3-215ENST00000582821 UPK3BQ9BT76 320 aa9.67□□□□□ -0.86
GGA3-215ENST00000582821 IGKV3D-20A0A0C4DH25 116 aa9.66□□□□□ -0.86
GGA3-215ENST00000582821 TRGV4A0A0C4DH28 118 aa9.66□□□□□ -0.86
GGA3-215ENST00000582821 CIDEAO60543 219 aa9.66□□□□□ -0.86
GGA3-215ENST00000582821 LTAP01374 205 aa9.66□□□□□ -0.86
GGA3-215ENST00000582821 S100A9P06702 114 aaKnown RBP9.66□□□□□ -0.86
GGA3-215ENST00000582821 SULT1A2P50226 295 aa9.66□□□□□ -0.86
GGA3-215ENST00000582821 UBE2G1P62253 170 aa9.66□□□□□ -0.86
GGA3-215ENST00000582821 NBDYA0A0U1RRE5 68 aa9.65□□□□□ -0.86
GGA3-215ENST00000582821 RTL8CO15255 209 aa9.65□□□□□ -0.86
GGA3-215ENST00000582821 SFTA3P0C7M3 94 aa9.65□□□□□ -0.86
GGA3-215ENST00000582821 RNASE3P12724 160 aaKnown RBP9.65□□□□□ -0.86
GGA3-215ENST00000582821 AKR1C3P42330 323 aa9.65□□□□□ -0.86
GGA3-215ENST00000582821 MRPL23Q16540 153 aaKnown RBP9.65□□□□□ -0.86
GGA3-215ENST00000582821 ZNF674Q2M3X9 581 aa9.65□□□□□ -0.86
GGA3-215ENST00000582821 DNLZQ5SXM8 178 aa9.65□□□□□ -0.86
GGA3-215ENST00000582821 OR4C5Q8NGB2 326 aa9.65□□□□□ -0.86
GGA3-215ENST00000582821 ZC2HC1AQ96GY0 325 aa9.65□□□□□ -0.86
GGA3-215ENST00000582821 Q9H8V8 135 aa9.65□□□□□ -0.86
GGA3-215ENST00000582821 MRPS16Q9Y3D3 137 aaKnown RBP9.65□□□□□ -0.86
GGA3-215ENST00000582821 ICOSQ9Y6W8 199 aa9.65□□□□□ -0.86
GGA3-215ENST00000582821 A0A1B0GV50 99 aa9.64□□□□□ -0.87
GGA3-215ENST00000582821 CCL20P78556 96 aa9.64□□□□□ -0.87
GGA3-215ENST00000582821 ZNF876PQ49A33 203 aa9.64□□□□□ -0.87
GGA3-215ENST00000582821 PIK3CD-AS1Q5SR53 167 aa9.64□□□□□ -0.87
GGA3-215ENST00000582821 FAM162BQ5T6X4 162 aa9.64□□□□□ -0.87
GGA3-215ENST00000582821 MANBALQ9NQG1 85 aa9.64□□□□□ -0.87
GGA3-215ENST00000582821 TEX46H3BTG2 121 aa9.63□□□□□ -0.87
GGA3-215ENST00000582821 RS1O15537 224 aa9.63□□□□□ -0.87
GGA3-215ENST00000582821 ORM1P02763 201 aa9.63□□□□□ -0.87
GGA3-215ENST00000582821 C1orf134Q5TEV5 83 aa9.63□□□□□ -0.87
GGA3-215ENST00000582821 C9orf62Q8N4C0 152 aa9.63□□□□□ -0.87
GGA3-215ENST00000582821 TXNDC17Q9BRA2 123 aa9.63□□□□□ -0.87
GGA3-215ENST00000582821 IL36BQ9NZH7 164 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms