RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ZFHX3Q15911 3703 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 ABCA12Q86UK0 2595 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 TRBV19A0A075B6N1 114 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 LOC110117498A0A087WWA1 95 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 SPTY2D1-AS1A0A0U1RR47 76 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 G3V2T6 193 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 CCL22O00626 93 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 MFSD11O43934 449 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 CST8O60676 142 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 BANF1O75531 89 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 PAEPP09466 180 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 SDC4P31431 198 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 RNASE4P34096 147 aaKnown RBP1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 SRP14P37108 136 aaKnown RBP1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 VBP1P61758 197 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 SNRPFP62306 86 aaKnown RBP1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 DYNLT1P63172 113 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 GNG3P63215 75 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 POU6F1Q14863 301 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 DEFB110Q30KQ9 67 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 DEFB109BQ30KR1 87 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 CLECL1Q8IZS7 167 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 C3orf56Q8N813 242 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 SLC30A7Q8NEW0 376 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 ZNF418Q8TF45 676 aaPredicted RBP1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 GINS3Q9BRX5 216 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 PRADC1Q9BSG0 188 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 SNRNP25Q9BV90 132 aaKnown RBP1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 PRNDQ9UKY0 176 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 ZFP30Q9Y2G7 519 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 RELNP78509 3460 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 TEX15Q9BXT5 2789 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 OBSL1O75147 1896 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 ANK1P16157 1881 aa1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 PDCD11Q14690 1871 aaKnown RBP1.2□□□□□ -2.22
SMCHD1-205ENST00000581383 CSMD1Q96PZ7 3565 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 PIEZO2Q9H5I5 2752 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 SPAG17Q6Q759 2223 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 GADD45GO95257 159 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 IFNA7P01567 189 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 STATHP02808 62 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 CRYBA4P53673 196 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 CNBPP62633 177 aaKnown RBP1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 ACACAQ13085 2346 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 SNCBQ16143 134 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 C1orf137Q5JT78 98 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 NCBP2-AS2Q69YL0 99 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 GKN2Q86XP6 184 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 Q8N814 137 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 TMEM35BQ8NCS4 154 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 OR13C6PQ8NH95 151 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 UFC1Q9Y3C8 167 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 CREBBPQ92793 2442 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 EML5Q05BV3 1969 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 AKAP9Q99996 3911 aa1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 HELZP42694 1942 aaKnown RBP1.19□□□□□ -2.22
SMCHD1-205ENST00000581383 PLXNA2O75051 1894 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 MYH9P35579 1960 aaKnown RBP1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 TNRC6AQ8NDV7 1962 aaKnown RBP1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 MGAQ8IWI9 3026 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 CCDC160A6NGH7 325 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 NDUFC2O95298 119 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 TNFP01375 233 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 FABP1P07148 127 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 RRN3P1Q2M238 152 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 TRIQKQ629K1 86 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 DCUN1D2Q6PH85 259 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 TEX261Q6UWH6 196 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 STX12Q86Y82 276 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 TEX47Q8TBZ9 253 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 C14orf132Q9NPU4 83 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 RASL12Q9NYN1 266 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 U3KQ87 197 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 AHNAK2Q8IVF2 5795 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 ATMQ13315 3056 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 BOD1L1Q8NFC6 3051 aa1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 UBR5O95071 2799 aaPredicted RBP1.18□□□□□ -2.22
SMCHD1-205ENST00000581383 SCN8AQ9UQD0 1980 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 ASCC3Q8N3C0 2202 aaKnown RBP1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 PTPRDP23468 1912 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 DOPEY2Q9Y3R5 2298 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 SPTBN1Q01082 2364 aaKnown RBP1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 H7C1C5 153 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 TMEM256-PLSCR3K7ERE1 68 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 TAX1BP3O14907 124 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 PHBP35232 272 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 LCN6P62502 163 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 MYL5Q02045 173 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 EIF3IQ13347 325 aaKnown RBP1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 SOSTDC1Q6X4U4 206 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 FDCSPQ8NFU4 85 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 DDA1Q9BW61 102 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 IMUPQ9GZP8 106 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 LYRM2Q9NU23 88 aaPredicted RBP1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 PCTPQ9UKL6 214 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 SSR3Q9UNL2 185 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 COL12A1Q99715 3063 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 ANK3Q12955 4377 aaKnown RBP1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 MYH10P35580 1976 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 FBN2P35556 2912 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms