RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 SPART-AS1P0CW21 52 aa11.99□□□□□ -0.49
CLN6-208ENST00000567060 FAM162BQ5T6X4 162 aa11.99□□□□□ -0.49
CLN6-208ENST00000567060 TIMM8BQ9Y5J9 83 aaPredicted RBP11.99□□□□□ -0.49
CLN6-208ENST00000567060 GNG4P50150 75 aa11.98□□□□□ -0.49
CLN6-208ENST00000567060 ZNF674Q2M3X9 581 aa11.98□□□□□ -0.49
CLN6-208ENST00000567060 SDF2L1Q9HCN8 221 aa11.98□□□□□ -0.49
CLN6-208ENST00000567060 DNAH10Q8IVF4 4471 aa11.98□□□□□ -0.49
CLN6-208ENST00000567060 RAB19A4D1S5 217 aa11.97□□□□□ -0.49
CLN6-208ENST00000567060 CXorf65A6NEN9 183 aa11.97□□□□□ -0.49
CLN6-208ENST00000567060 SNURFLB1AK76 121 aa11.97□□□□□ -0.49
CLN6-208ENST00000567060 HTN1P15515 57 aa11.97□□□□□ -0.49
CLN6-208ENST00000567060 ZNF80P51504 273 aaPredicted RBP11.97□□□□□ -0.49
CLN6-208ENST00000567060 DAZ2Q13117 558 aaKnown RBP11.97□□□□□ -0.49
CLN6-208ENST00000567060 CENPWQ5EE01 88 aa11.97□□□□□ -0.49
CLN6-208ENST00000567060 C11orf45Q8TAV5 145 aa11.97□□□□□ -0.49
CLN6-208ENST00000567060 ZC2HC1AQ96GY0 325 aa11.97□□□□□ -0.49
CLN6-208ENST00000567060 DERL1Q9BUN8 251 aa11.97□□□□□ -0.49
CLN6-208ENST00000567060 DKK2Q9UBU2 259 aa11.97□□□□□ -0.49
CLN6-208ENST00000567060 LY96Q9Y6Y9 160 aa11.97□□□□□ -0.49
CLN6-208ENST00000567060 PLAC8L1A1L4L8 177 aa11.96□□□□□ -0.49
CLN6-208ENST00000567060 AZU1P20160 251 aa11.96□□□□□ -0.49
CLN6-208ENST00000567060 TCL1AP56279 114 aa11.96□□□□□ -0.49
CLN6-208ENST00000567060 ZNF415Q09FC8 603 aa11.96□□□□□ -0.49
CLN6-208ENST00000567060 FAM74A3Q4VXF1 159 aa11.96□□□□□ -0.49
CLN6-208ENST00000567060 PCNPQ8WW12 178 aaKnown RBP11.96□□□□□ -0.49
CLN6-208ENST00000567060 PARLQ9H300 379 aa11.96□□□□□ -0.49
CLN6-208ENST00000567060 SRP19P09132 144 aaKnown RBP11.95□□□□□ -0.5
CLN6-208ENST00000567060 C11orf72Q8NBR9 251 aa11.95□□□□□ -0.5
CLN6-208ENST00000567060 SPXQ9BT56 116 aa11.95□□□□□ -0.5
CLN6-208ENST00000567060 PCLOQ9Y6V0 5065 aa11.94□□□□□ -0.5
CLN6-208ENST00000567060 DEFB4AO15263 64 aa11.94□□□□□ -0.5
CLN6-208ENST00000567060 CXCL1P09341 107 aa11.94□□□□□ -0.5
CLN6-208ENST00000567060 LGALS9BQ3B8N2 356 aa11.94□□□□□ -0.5
CLN6-208ENST00000567060 LINC01559Q495D7 138 aa11.94□□□□□ -0.5
CLN6-208ENST00000567060 MUC21Q5SSG8 566 aa11.94□□□□□ -0.5
CLN6-208ENST00000567060 DNLZQ5SXM8 178 aa11.94□□□□□ -0.5
CLN6-208ENST00000567060 FAM222AQ5U5X8 452 aa11.94□□□□□ -0.5
CLN6-208ENST00000567060 NAGKQ9UJ70 344 aa11.94□□□□□ -0.5
CLN6-208ENST00000567060 SH2D1AO60880 128 aa11.93□□□□□ -0.5
CLN6-208ENST00000567060 CRIP1P50238 77 aa11.93□□□□□ -0.5
CLN6-208ENST00000567060 EMP1P54849 157 aa11.93□□□□□ -0.5
CLN6-208ENST00000567060 C18orf15Q96N68 181 aa11.93□□□□□ -0.5
CLN6-208ENST00000567060 NDUFAF3Q9BU61 184 aa11.93□□□□□ -0.5
CLN6-208ENST00000567060 TRBV20OR9-2A0A075B6H5 130 aa11.92□□□□□ -0.5
CLN6-208ENST00000567060 IGLV2-8P01709 118 aa11.92□□□□□ -0.5
CLN6-208ENST00000567060 TYMSP04818 313 aa11.92□□□□□ -0.5
CLN6-208ENST00000567060 Q6ZQT7 251 aa11.92□□□□□ -0.5
CLN6-208ENST00000567060 LINC00612Q8N6U2 182 aa11.92□□□□□ -0.5
CLN6-208ENST00000567060 SMIM7Q9BQ49 75 aa11.92□□□□□ -0.5
CLN6-208ENST00000567060 RYR1P21817 5038 aa11.91□□□□□ -0.5
CLN6-208ENST00000567060 IGHV3-16A0A0C4DH30 117 aa11.91□□□□□ -0.5
CLN6-208ENST00000567060 ZNF727A8MUV8 499 aa11.91□□□□□ -0.5
CLN6-208ENST00000567060 B4DEV8 164 aa11.91□□□□□ -0.5
CLN6-208ENST00000567060 ORM1P02763 201 aa11.91□□□□□ -0.5
CLN6-208ENST00000567060 PRM2P04554 102 aa11.91□□□□□ -0.5
CLN6-208ENST00000567060 UQCC3Q6UW78 93 aa11.91□□□□□ -0.5
CLN6-208ENST00000567060 NHLRC2Q8NBF2 726 aa11.91□□□□□ -0.5
CLN6-208ENST00000567060 PTH2Q96A98 100 aa11.91□□□□□ -0.5
CLN6-208ENST00000567060 DAZAP1Q96EP5 407 aaKnown RBP11.91□□□□□ -0.5
CLN6-208ENST00000567060 NOP10Q9NPE3 64 aaKnown RBP11.91□□□□□ -0.5
CLN6-208ENST00000567060 GSN-AS1Q9NRJ2 163 aa11.91□□□□□ -0.5
CLN6-208ENST00000567060 C11orf21Q9P2W6 132 aa11.91□□□□□ -0.5
CLN6-208ENST00000567060 IGKV3D-20A0A0C4DH25 116 aa11.9□□□□□ -0.5
CLN6-208ENST00000567060 KRBOX1C9JBD0 128 aa11.9□□□□□ -0.5
CLN6-208ENST00000567060 SPINK4O60575 86 aa11.9□□□□□ -0.5
CLN6-208ENST00000567060 MGST1P10620 155 aaKnown RBP11.9□□□□□ -0.5
CLN6-208ENST00000567060 ASIPP42127 132 aa11.9□□□□□ -0.5
CLN6-208ENST00000567060 RPS20P60866 119 aaKnown RBP11.9□□□□□ -0.5
CLN6-208ENST00000567060 DAD1P61803 113 aa11.9□□□□□ -0.5
CLN6-208ENST00000567060 PIK3CD-AS1Q5SR53 167 aa11.9□□□□□ -0.5
CLN6-208ENST00000567060 CELA1Q9UNI1 258 aa11.9□□□□□ -0.5
CLN6-208ENST00000567060 HECTD4Q9Y4D8 3996 aa11.89□□□□□ -0.51
CLN6-208ENST00000567060 XKRY2A2RUG3 117 aa11.89□□□□□ -0.51
CLN6-208ENST00000567060 NUPR2A6NF83 97 aa11.89□□□□□ -0.51
CLN6-208ENST00000567060 MED14OSP0DP75 135 aa11.89□□□□□ -0.51
CLN6-208ENST00000567060 CEBPGP53567 150 aa11.89□□□□□ -0.51
CLN6-208ENST00000567060 C12orf74Q32Q52 190 aa11.89□□□□□ -0.51
CLN6-208ENST00000567060 PRR27Q6MZM9 219 aa11.89□□□□□ -0.51
CLN6-208ENST00000567060 IL36BQ9NZH7 164 aa11.89□□□□□ -0.51
CLN6-208ENST00000567060 TRAV10A0A0B4J240 114 aa11.88□□□□□ -0.51
CLN6-208ENST00000567060 C19orf71A6NCJ1 209 aa11.88□□□□□ -0.51
CLN6-208ENST00000567060 M0R2P5 195 aa11.88□□□□□ -0.51
CLN6-208ENST00000567060 GNRH2O43555 120 aa11.88□□□□□ -0.51
CLN6-208ENST00000567060 S100A4P26447 101 aaKnown RBP11.88□□□□□ -0.51
CLN6-208ENST00000567060 NANOS2P60321 138 aaKnown RBP11.88□□□□□ -0.51
CLN6-208ENST00000567060 SOHLH1Q5JUK2 328 aa11.88□□□□□ -0.51
CLN6-208ENST00000567060 OCC1Q8TAD7 63 aa11.88□□□□□ -0.51
CLN6-208ENST00000567060 RASL10AQ92737 203 aa11.88□□□□□ -0.51
CLN6-208ENST00000567060 C9orf85Q96MD7 179 aa11.88□□□□□ -0.51
CLN6-208ENST00000567060 MDFICQ9P1T7 246 aa11.88□□□□□ -0.51
CLN6-208ENST00000567060 P01737 135 aa11.87□□□□□ -0.51
CLN6-208ENST00000567060 OR5I1Q13606 314 aa11.87□□□□□ -0.51
CLN6-208ENST00000567060 TMEM241Q24JQ0 296 aa11.87□□□□□ -0.51
CLN6-208ENST00000567060 FAM231DQ6ZW35 169 aa11.87□□□□□ -0.51
CLN6-208ENST00000567060 NAT8Q9UHE5 227 aa11.87□□□□□ -0.51
CLN6-208ENST00000567060 CIDEAO60543 219 aa11.86□□□□□ -0.51
CLN6-208ENST00000567060 ATP5G1P05496 136 aa11.86□□□□□ -0.51
CLN6-208ENST00000567060 TCTAP57738 103 aa11.86□□□□□ -0.51
CLN6-208ENST00000567060 SRSF3P84103 164 aaKnown RBP11.86□□□□□ -0.51
CLN6-208ENST00000567060 LINC01551Q86U37 167 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms