RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 SMCO4Q9NRQ5 59 aa10.75□□□□□ -0.69
SPG7-213ENST00000566221 IGHV3OR16-12A0A075B7B8 117 aa10.74□□□□□ -0.69
SPG7-213ENST00000566221 PGPEP1LA6NFU8 196 aa10.74□□□□□ -0.69
SPG7-213ENST00000566221 ERVFC1-1P60608 527 aa10.74□□□□□ -0.69
SPG7-213ENST00000566221 RNF212Q495C1 297 aa10.74□□□□□ -0.69
SPG7-213ENST00000566221 ATRAIDQ6UW56 229 aa10.74□□□□□ -0.69
SPG7-213ENST00000566221 DAZAP1Q96EP5 407 aaKnown RBP10.74□□□□□ -0.69
SPG7-213ENST00000566221 IMMP2LQ96T52 175 aa10.74□□□□□ -0.69
SPG7-213ENST00000566221 PYGO2Q9BRQ0 406 aa10.74□□□□□ -0.69
SPG7-213ENST00000566221 ZMAT4Q9H898 229 aa10.74□□□□□ -0.69
SPG7-213ENST00000566221 COL7A1Q02388 2944 aa10.74□□□□□ -0.69
SPG7-213ENST00000566221 FABP5P3A8MUU1 101 aa10.73□□□□□ -0.69
SPG7-213ENST00000566221 SH2D1AO60880 128 aa10.73□□□□□ -0.69
SPG7-213ENST00000566221 PRR27Q6MZM9 219 aa10.73□□□□□ -0.69
SPG7-213ENST00000566221 LINC01587Q99440 93 aa10.73□□□□□ -0.69
SPG7-213ENST00000566221 NEU1Q99519 415 aa10.73□□□□□ -0.69
SPG7-213ENST00000566221 OVOL2Q9BRP0 275 aa10.73□□□□□ -0.69
SPG7-213ENST00000566221 LINC00467Q9BRT7 94 aa10.73□□□□□ -0.69
SPG7-213ENST00000566221 RETNQ9HD89 108 aa10.73□□□□□ -0.69
SPG7-213ENST00000566221 C19orf71A6NCJ1 209 aa10.72□□□□□ -0.69
SPG7-213ENST00000566221 CT83Q5H943 113 aa10.72□□□□□ -0.69
SPG7-213ENST00000566221 IBA57Q5T440 356 aaKnown RBP10.72□□□□□ -0.69
SPG7-213ENST00000566221 FAM159AQ6UWV7 190 aa10.72□□□□□ -0.69
SPG7-213ENST00000566221 Q6ZQT7 251 aa10.72□□□□□ -0.69
SPG7-213ENST00000566221 OR11H2Q8NH07 326 aa10.72□□□□□ -0.69
SPG7-213ENST00000566221 NAGKQ9UJ70 344 aa10.72□□□□□ -0.69
SPG7-213ENST00000566221 IGHV1OR15-1A0A075B7D0 117 aa10.71□□□□□ -0.69
SPG7-213ENST00000566221 SMIM9A6NGZ8 99 aa10.71□□□□□ -0.69
SPG7-213ENST00000566221 NHLRC4P0CG21 123 aaPredicted RBP10.71□□□□□ -0.69
SPG7-213ENST00000566221 CRIP1P50238 77 aa10.71□□□□□ -0.69
SPG7-213ENST00000566221 OR5I1Q13606 314 aa10.71□□□□□ -0.69
SPG7-213ENST00000566221 TDRG1Q3Y452 100 aa10.71□□□□□ -0.69
SPG7-213ENST00000566221 MUC21Q5SSG8 566 aa10.71□□□□□ -0.69
SPG7-213ENST00000566221 BTF3L4Q96K17 158 aa10.71□□□□□ -0.69
SPG7-213ENST00000566221 KCNS1Q96KK3 526 aa10.71□□□□□ -0.69
SPG7-213ENST00000566221 X6R8D5 127 aa10.71□□□□□ -0.69
SPG7-213ENST00000566221 GATCO43716 136 aaKnown RBP10.7□□□□□ -0.7
SPG7-213ENST00000566221 P01737 135 aa10.7□□□□□ -0.7
SPG7-213ENST00000566221 MIFP14174 115 aa10.7□□□□□ -0.7
SPG7-213ENST00000566221 S100PP25815 95 aa10.7□□□□□ -0.7
SPG7-213ENST00000566221 RRN3P1Q2M238 152 aa10.7□□□□□ -0.7
SPG7-213ENST00000566221 NUDT10Q8NFP7 164 aa10.7□□□□□ -0.7
SPG7-213ENST00000566221 NUDT11Q96G61 164 aa10.7□□□□□ -0.7
SPG7-213ENST00000566221 C11orf21Q9P2W6 132 aa10.7□□□□□ -0.7
SPG7-213ENST00000566221 TRAV9-1A0A075B6T8 112 aa10.69□□□□□ -0.7
SPG7-213ENST00000566221 XKRY2A2RUG3 117 aa10.69□□□□□ -0.7
SPG7-213ENST00000566221 FAM231BA6NCW3 169 aa10.69□□□□□ -0.7
SPG7-213ENST00000566221 CBY3A6NI87 242 aa10.69□□□□□ -0.7
SPG7-213ENST00000566221 ZNF705GA8MUZ8 300 aaPredicted RBP10.69□□□□□ -0.7
SPG7-213ENST00000566221 ORM1P02763 201 aa10.69□□□□□ -0.7
SPG7-213ENST00000566221 HTN1P15515 57 aa10.69□□□□□ -0.7
SPG7-213ENST00000566221 RPS20P60866 119 aaKnown RBP10.69□□□□□ -0.7
SPG7-213ENST00000566221 ANXA2RQ3ZCQ2 193 aa10.69□□□□□ -0.7
SPG7-213ENST00000566221 LINC01559Q495D7 138 aa10.69□□□□□ -0.7
SPG7-213ENST00000566221 KCNIP4Q6PIL6 250 aa10.69□□□□□ -0.7
SPG7-213ENST00000566221 TMEM263Q8WUH6 116 aaKnown RBP10.69□□□□□ -0.7
SPG7-213ENST00000566221 C16orf74Q96GX8 76 aa10.69□□□□□ -0.7
SPG7-213ENST00000566221 RNASE7Q9H1E1 156 aaKnown RBP10.69□□□□□ -0.7
SPG7-213ENST00000566221 V9GYV3 84 aa10.69□□□□□ -0.7
SPG7-213ENST00000566221 STAB2Q8WWQ8 2551 aa10.68□□□□□ -0.7
SPG7-213ENST00000566221 TRGV11A0A075B6L2 103 aa10.68□□□□□ -0.7
SPG7-213ENST00000566221 A8MWL6 223 aa10.68□□□□□ -0.7
SPG7-213ENST00000566221 ZNF493Q6ZR52 646 aa10.68□□□□□ -0.7
SPG7-213ENST00000566221 GFRA4Q9GZZ7 299 aa10.68□□□□□ -0.7
SPG7-213ENST00000566221 RPP21Q9H633 154 aaKnown RBP10.68□□□□□ -0.7
SPG7-213ENST00000566221 IL36BQ9NZH7 164 aa10.68□□□□□ -0.7
SPG7-213ENST00000566221 KMT2CQ8NEZ4 4911 aaKnown RBP10.68□□□□□ -0.7
SPG7-213ENST00000566221 IGHV4-28A0A0C4DH34 117 aa10.67□□□□□ -0.7
SPG7-213ENST00000566221 TMEM189A5PLL7 270 aa10.67□□□□□ -0.7
SPG7-213ENST00000566221 RPL19P84098 196 aaKnown RBP10.67□□□□□ -0.7
SPG7-213ENST00000566221 Q8NAQ8 132 aa10.67□□□□□ -0.7
SPG7-213ENST00000566221 RNASE8Q8TDE3 154 aaKnown RBP10.67□□□□□ -0.7
SPG7-213ENST00000566221 IGKV3D-20A0A0C4DH25 116 aa10.66□□□□□ -0.7
SPG7-213ENST00000566221 SCO1O75880 301 aa10.66□□□□□ -0.7
SPG7-213ENST00000566221 TYMSP04818 313 aa10.66□□□□□ -0.7
SPG7-213ENST00000566221 AZU1P20160 251 aa10.66□□□□□ -0.7
SPG7-213ENST00000566221 ZNF415Q09FC8 603 aa10.66□□□□□ -0.7
SPG7-213ENST00000566221 TSKUQ8WUA8 353 aa10.66□□□□□ -0.7
SPG7-213ENST00000566221 C11orf68Q9H3H3 251 aaKnown RBP10.66□□□□□ -0.7
SPG7-213ENST00000566221 TP53TG3Q9ULZ0 132 aa10.66□□□□□ -0.7
SPG7-213ENST00000566221 DNAH9Q9NYC9 4486 aa10.66□□□□□ -0.7
SPG7-213ENST00000566221 SMIM27A0A1W2PRY6 76 aa10.65□□□□□ -0.7
SPG7-213ENST00000566221 PRM2P04554 102 aa10.65□□□□□ -0.7
SPG7-213ENST00000566221 CXCL1P09341 107 aa10.65□□□□□ -0.7
SPG7-213ENST00000566221 ASIPP42127 132 aa10.65□□□□□ -0.7
SPG7-213ENST00000566221 FOXA3P55318 350 aaPredicted RBP10.65□□□□□ -0.7
SPG7-213ENST00000566221 TMEM88Q6PEY1 159 aa10.65□□□□□ -0.7
SPG7-213ENST00000566221 OR2D3Q8NGH3 330 aa10.65□□□□□ -0.7
SPG7-213ENST00000566221 TRBV24-1A0A075B6N3 115 aa10.64□□□□□ -0.71
SPG7-213ENST00000566221 TMSB15BA0A087X1C1 80 aa10.64□□□□□ -0.71
SPG7-213ENST00000566221 IGHV3-16A0A0C4DH30 117 aa10.64□□□□□ -0.71
SPG7-213ENST00000566221 SNURFLB1AK76 121 aa10.64□□□□□ -0.71
SPG7-213ENST00000566221 TCL1AP56279 114 aa10.64□□□□□ -0.71
SPG7-213ENST00000566221 DNLZQ5SXM8 178 aa10.64□□□□□ -0.71
SPG7-213ENST00000566221 CBLN2Q8IUK8 224 aa10.64□□□□□ -0.71
SPG7-213ENST00000566221 C11orf72Q8NBR9 251 aa10.64□□□□□ -0.71
SPG7-213ENST00000566221 NAT8BQ9UHF3 227 aa10.64□□□□□ -0.71
SPG7-213ENST00000566221 MUC4Q99102 2169 aa10.64□□□□□ -0.71
SPG7-213ENST00000566221 GNRH2O43555 120 aa10.63□□□□□ -0.71
SPG7-213ENST00000566221 S100A4P26447 101 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms