RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 ELOBQ15370 118 aa7.45□□□□□ -1.22
SMG1-208ENST00000563448 RBMY1FQ15415 496 aaKnown RBP7.45□□□□□ -1.22
SMG1-208ENST00000563448 SAMD5Q5TGI4 173 aa7.45□□□□□ -1.22
SMG1-208ENST00000563448 IMMP2LQ96T52 175 aa7.45□□□□□ -1.22
SMG1-208ENST00000563448 UBE2CO00762 179 aa7.45□□□□□ -1.22
SMG1-208ENST00000563448 RPL35AP18077 110 aaKnown RBP7.45□□□□□ -1.22
SMG1-208ENST00000563448 TSKUQ8WUA8 353 aa7.45□□□□□ -1.22
SMG1-208ENST00000563448 GTSF1Q8WW33 167 aa7.45□□□□□ -1.22
SMG1-208ENST00000563448 SRD5A3Q9H8P0 318 aa7.45□□□□□ -1.22
SMG1-208ENST00000563448 DNHD1Q96M86 4753 aa7.44□□□□□ -1.22
SMG1-208ENST00000563448 A8MWL6 223 aa7.44□□□□□ -1.22
SMG1-208ENST00000563448 CXCL1P09341 107 aa7.44□□□□□ -1.22
SMG1-208ENST00000563448 TCL1AP56279 114 aa7.44□□□□□ -1.22
SMG1-208ENST00000563448 MUC4Q99102 2169 aa7.44□□□□□ -1.22
SMG1-208ENST00000563448 TGIF2-C20orf24A0A0A6YYL0 155 aa7.44□□□□□ -1.22
SMG1-208ENST00000563448 COLCA2A8K830 154 aa7.44□□□□□ -1.22
SMG1-208ENST00000563448 GIG44P09565 113 aaPredicted RBP7.44□□□□□ -1.22
SMG1-208ENST00000563448 ANXA2RQ3ZCQ2 193 aa7.44□□□□□ -1.22
SMG1-208ENST00000563448 MUC21Q5SSG8 566 aa7.44□□□□□ -1.22
SMG1-208ENST00000563448 KCNIP4Q6PIL6 250 aa7.44□□□□□ -1.22
SMG1-208ENST00000563448 NEU1Q99519 415 aa7.44□□□□□ -1.22
SMG1-208ENST00000563448 GFRA4Q9GZZ7 299 aa7.44□□□□□ -1.22
SMG1-208ENST00000563448 NAGKQ9UJ70 344 aa7.44□□□□□ -1.22
SMG1-208ENST00000563448 PKD1L1Q8TDX9 2849 aa7.43□□□□□ -1.22
SMG1-208ENST00000563448 GRIFINA4D1Z8 144 aa7.43□□□□□ -1.22
SMG1-208ENST00000563448 C5orf52A6NGY3 159 aa7.43□□□□□ -1.22
SMG1-208ENST00000563448 RPS20P60866 119 aaKnown RBP7.43□□□□□ -1.22
SMG1-208ENST00000563448 NUTF2P61970 127 aaKnown RBP7.43□□□□□ -1.22
SMG1-208ENST00000563448 NUP35Q8NFH5 326 aa7.43□□□□□ -1.22
SMG1-208ENST00000563448 XCL2Q9UBD3 114 aa7.43□□□□□ -1.22
SMG1-208ENST00000563448 DNAH3Q8TD57 4116 aa7.43□□□□□ -1.22
SMG1-208ENST00000563448 A0A1W2PPQ1 181 aa7.42□□□□□ -1.22
SMG1-208ENST00000563448 FAM231BA6NCW3 169 aa7.42□□□□□ -1.22
SMG1-208ENST00000563448 HIGD1CA8MV81 97 aa7.42□□□□□ -1.22
SMG1-208ENST00000563448 AMBPP02760 352 aa7.42□□□□□ -1.22
SMG1-208ENST00000563448 FOXA3P55318 350 aaPredicted RBP7.42□□□□□ -1.22
SMG1-208ENST00000563448 MORN3Q6PF18 240 aaPredicted RBP7.42□□□□□ -1.22
SMG1-208ENST00000563448 PYGO2Q9BRQ0 406 aa7.42□□□□□ -1.22
SMG1-208ENST00000563448 GSN-AS1Q9NRJ2 163 aa7.42□□□□□ -1.22
SMG1-208ENST00000563448 NAT8BQ9UHF3 227 aa7.42□□□□□ -1.22
SMG1-208ENST00000563448 XKRY2A2RUG3 117 aa7.42□□□□□ -1.22
SMG1-208ENST00000563448 GNRH2O43555 120 aa7.42□□□□□ -1.22
SMG1-208ENST00000563448 INSP01308 110 aa7.42□□□□□ -1.22
SMG1-208ENST00000563448 TYMSP04818 313 aa7.42□□□□□ -1.22
SMG1-208ENST00000563448 IGLC6P0CF74 106 aa7.42□□□□□ -1.22
SMG1-208ENST00000563448 SSTP61278 116 aa7.42□□□□□ -1.22
SMG1-208ENST00000563448 FAM159AQ6UWV7 190 aa7.42□□□□□ -1.22
SMG1-208ENST00000563448 TP53TG3Q9ULZ0 132 aa7.42□□□□□ -1.22
SMG1-208ENST00000563448 TRBV24-1A0A075B6N3 115 aa7.41□□□□□ -1.22
SMG1-208ENST00000563448 IGHV1OR15-1A0A075B7D0 117 aa7.41□□□□□ -1.22
SMG1-208ENST00000563448 SPINK4O60575 86 aa7.41□□□□□ -1.22
SMG1-208ENST00000563448 TDRG1Q3Y452 100 aa7.41□□□□□ -1.22
SMG1-208ENST00000563448 C1orf158Q8N1D5 194 aa7.41□□□□□ -1.22
SMG1-208ENST00000563448 PGLYRP4Q96LB8 373 aa7.41□□□□□ -1.22
SMG1-208ENST00000563448 C20orf144Q9BQM9 153 aa7.41□□□□□ -1.22
SMG1-208ENST00000563448 TRAV9-1A0A075B6T8 112 aa7.4□□□□□ -1.22
SMG1-208ENST00000563448 LOC102724200A0A096LPH7 203 aaPredicted RBP7.4□□□□□ -1.22
SMG1-208ENST00000563448 IGHV4-30-4P0DP06 118 aa7.4□□□□□ -1.22
SMG1-208ENST00000563448 DNLZQ5SXM8 178 aa7.4□□□□□ -1.22
SMG1-208ENST00000563448 LYZL1Q6UWQ5 148 aa7.4□□□□□ -1.22
SMG1-208ENST00000563448 CSNK1G2-AS1Q8NCQ2 148 aa7.4□□□□□ -1.22
SMG1-208ENST00000563448 KCNS1Q96KK3 526 aa7.4□□□□□ -1.22
SMG1-208ENST00000563448 PRM2P04554 102 aa7.4□□□□□ -1.23
SMG1-208ENST00000563448 FRMD6-AS1P0C7T7 363 aa7.4□□□□□ -1.23
SMG1-208ENST00000563448 FER1L6-AS1Q8NA97 138 aa7.4□□□□□ -1.23
SMG1-208ENST00000563448 BTF3L4Q96K17 158 aa7.4□□□□□ -1.23
SMG1-208ENST00000563448 FAM210BQ96KR6 192 aa7.4□□□□□ -1.23
SMG1-208ENST00000563448 CSTL1Q9H114 145 aa7.4□□□□□ -1.23
SMG1-208ENST00000563448 LINC00587B1AMM8 73 aa7.39□□□□□ -1.23
SMG1-208ENST00000563448 RNASE3P12724 160 aaKnown RBP7.39□□□□□ -1.23
SMG1-208ENST00000563448 SNRPEP62304 92 aaKnown RBP7.39□□□□□ -1.23
SMG1-208ENST00000563448 MRPL54Q6P161 138 aaKnown RBP7.39□□□□□ -1.23
SMG1-208ENST00000563448 LINC01587Q99440 93 aa7.39□□□□□ -1.23
SMG1-208ENST00000563448 LINC00467Q9BRT7 94 aa7.39□□□□□ -1.23
SMG1-208ENST00000563448 TPPP3Q9BW30 176 aa7.39□□□□□ -1.23
SMG1-208ENST00000563448 SSBP4Q9BWG4 385 aaPredicted RBP7.39□□□□□ -1.23
SMG1-208ENST00000563448 C1QTNF4Q9BXJ3 329 aa7.39□□□□□ -1.23
SMG1-208ENST00000563448 NIT2Q9NQR4 276 aa7.39□□□□□ -1.23
SMG1-208ENST00000563448 MUC21A0A0G2JKD1 596 aa7.39□□□□□ -1.23
SMG1-208ENST00000563448 MUC21A0A140T8X8 626 aa7.39□□□□□ -1.23
SMG1-208ENST00000563448 H3BVH4 76 aa7.39□□□□□ -1.23
SMG1-208ENST00000563448 SNAI2O43623 268 aa7.39□□□□□ -1.23
SMG1-208ENST00000563448 ARMS2P0C7Q2 107 aa7.39□□□□□ -1.23
SMG1-208ENST00000563448 CTRLP40313 264 aa7.39□□□□□ -1.23
SMG1-208ENST00000563448 ASIPP42127 132 aa7.39□□□□□ -1.23
SMG1-208ENST00000563448 IGHV3-16A0A0C4DH30 117 aa7.38□□□□□ -1.23
SMG1-208ENST00000563448 CBY3A6NI87 242 aa7.38□□□□□ -1.23
SMG1-208ENST00000563448 SPRY2O43597 315 aa7.38□□□□□ -1.23
SMG1-208ENST00000563448 RAB5AP20339 215 aa7.38□□□□□ -1.23
SMG1-208ENST00000563448 KPRPQ5T749 579 aaPredicted RBP7.38□□□□□ -1.23
SMG1-208ENST00000563448 TMEM256Q8N2U0 113 aa7.38□□□□□ -1.23
SMG1-208ENST00000563448 MDFICQ9P1T7 246 aa7.38□□□□□ -1.23
SMG1-208ENST00000563448 NACAE9PAV3 2078 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 IGHV3OR16-12A0A075B7B8 117 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 KIR2DL5BA0A0G2JN68 375 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 KIR2DL5BA0A0G2JPC4 375 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 A0A1B0GUT8 65 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 A0A1B0GXF2 115 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 A8MZ25 164 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 OR5AL1P0C617 328 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms