RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 PTPRSQ13332 1948 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 NINQ8N4C6 2090 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 PLXNA2O75051 1894 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 IGHV7-81A0A0B4J1V7 117 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 PEX7O00628 323 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 TIMM17BO60830 172 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 FGF12P61328 243 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 PMCHL1Q16048 86 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 MPV17LQ2QL34 196 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 FAM104AQ969W3 186 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 FGF23Q9GZV9 251 aaPredicted RBP3.44□□□□□ -1.86
SMG1-207ENST00000563235 SLC25A22Q9H936 323 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 NAV2Q8IVL1 2488 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 PTPRDP23468 1912 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 SDCBPO00560 298 aaPredicted RBP3.44□□□□□ -1.86
SMG1-207ENST00000563235 PRSS2P07478 247 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 COX7A1P24310 79 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 CMC4P56277 68 aaPredicted RBP3.44□□□□□ -1.86
SMG1-207ENST00000563235 ZNF816Q0VGE8 651 aaPredicted RBP3.44□□□□□ -1.86
SMG1-207ENST00000563235 KRTAP27-1Q3LI81 207 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 SPATA12Q7Z6I5 190 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 SBSPONQ8IVN8 264 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 TSKUQ8WUA8 353 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 CHAC1Q9BUX1 264 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 SCRT2Q9NQ03 307 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 MANBALQ9NQG1 85 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 CPAMD8Q8IZJ3 1885 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 CDH23Q9H251 3354 aa3.44□□□□□ -1.86
SMG1-207ENST00000563235 ZNF688P0C7X2 276 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 PLA2G2AP14555 144 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 ZNF32P17041 273 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 RSPO1Q2MKA7 263 aaPredicted RBP3.43□□□□□ -1.86
SMG1-207ENST00000563235 NMSQ5H8A3 153 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 POM121L12Q8N7R1 296 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 OR8B3Q8NGG8 313 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 RIF1Q5UIP0 2472 aaKnown RBP3.43□□□□□ -1.86
SMG1-207ENST00000563235 ZFP92A6NM28 416 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 C17orf112F2Z3M2 114 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 K7EM74 188 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 NANOS3P60323 173 aaKnown RBP3.43□□□□□ -1.86
SMG1-207ENST00000563235 IGFBP7Q16270 282 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 TMEM155Q4W5P6 130 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 CD177Q8N6Q3 437 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 PRSS3P2Q8NHM4 247 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 COPS9Q8WXC6 57 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 ZNF714Q96N38 554 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 DHRS4-AS1Q9P1J3 65 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 LEPROTO15243 131 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 IGKCP01834 107 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 BGLAPP02818 100 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 MDKP21741 143 aaPredicted RBP3.43□□□□□ -1.86
SMG1-207ENST00000563235 C2orf83Q53S99 150 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 ZNF575Q86XF7 245 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 PPDPFLQ8WWR9 84 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 PRO0461Q9UI25 63 aa3.43□□□□□ -1.86
SMG1-207ENST00000563235 CFAP47Q6ZTR5 3102 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 TRBV7-7A0A0K0K1E9 115 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 ZNF737O75373 536 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 LY6G6DO95868 133 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 PRH1P02810 166 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 CGB3P0DN86 165 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 CGB7P0DN87 165 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 FUSP35637 526 aaKnown RBP eCLIP3.42□□□□□ -1.86
SMG1-207ENST00000563235 PCBD1P61457 104 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 FAM104BQ5XKR9 115 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 OCR1Q9BZK8 76 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 TAC3Q9UHF0 121 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 C5orf42Q9H799 3197 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 DIDO1Q9BTC0 2240 aaKnown RBP3.42□□□□□ -1.86
SMG1-207ENST00000563235 TRIP12Q14669 1992 aaPredicted RBP3.42□□□□□ -1.86
SMG1-207ENST00000563235 IGHV4-4A0A075B6R2 117 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 IGHV4OR15-8A0A075B7B6 117 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 IGHV3-16A0A0C4DH30 117 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 FHL2Q14192 279 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 C9orf57Q5W0N0 161 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 C6orf106Q9H6K1 298 aaPredicted RBP3.42□□□□□ -1.86
SMG1-207ENST00000563235 ZNF407Q9C0G0 2248 aa3.42□□□□□ -1.86
SMG1-207ENST00000563235 TET2Q6N021 2002 aaPredicted RBP3.41□□□□□ -1.86
SMG1-207ENST00000563235 IGLV3-16A0A075B6K0 115 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 KRTAP4-16G5E9R7 235 aaPredicted RBP3.41□□□□□ -1.86
SMG1-207ENST00000563235 SYS1-DBNDD2H3BUS1 97 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 SERF1AO75920 110 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 LMO2P25791 158 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 DSCR9P59020 149 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 NANOS2P60321 138 aaKnown RBP3.41□□□□□ -1.86
SMG1-207ENST00000563235 BLCAPP62952 87 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 CXCL6P80162 114 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 CIRBPQ14011 172 aaKnown RBP3.41□□□□□ -1.86
SMG1-207ENST00000563235 FAM78AQ5JUQ0 283 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 AMN1Q8IY45 258 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 TRAPPC1Q9Y5R8 145 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 ARID1AO14497 2285 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 COL8A2P25067 703 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 DAZAP2Q15038 168 aaPredicted RBP3.41□□□□□ -1.86
SMG1-207ENST00000563235 C10orf25Q5T742 122 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 PATE2Q6UY27 113 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 LINC00479Q96M42 142 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 OR8B2Q96RD0 313 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 UPK3BQ9BT76 320 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 KRTAP4-7Q9BYR0 210 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms