RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 CKS2P33552 79 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 AKR1D1P51857 326 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 HIST1H1AQ02539 215 aaPredicted RBP0.75□□□□□ -2.29
LINC00557-201ENST00000563184 HSD17B12Q53GQ0 312 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 Q5XG85 94 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 IZUMO2Q6UXV1 221 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 LINC00299Q6ZSB3 139 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 ATOH7Q8N100 152 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 C10orf111Q8N326 155 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 TEX29Q8N6K0 151 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 OR10AC1Q8NH08 325 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 BRK1Q8WUW1 75 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 NABP2Q9BQ15 211 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 SMIM7Q9BQ49 75 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 VPS25Q9BRG1 176 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 WFDC10AQ9H1F0 79 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 DIP2BQ9P265 1576 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 POLA1P09884 1462 aaPredicted RBP0.74□□□□□ -2.29
LINC00557-201ENST00000563184 GRIN2AQ12879 1464 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 OVOS2A0A0J9YW53 1432 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 OVOS2Q6IE36 1432 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 TRAV2A0A0B4J234 112 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 A0A0J9YY99 117 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 A0A1B0GW64 132 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 BBIP1A8MTZ0 92 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 K7EP13 123 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 CDC42EP2O14613 210 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 NDUFA2O43678 99 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 MT-ND4LP03901 98 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 TCRAP04437 139 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 SLC25A5P05141 298 aaKnown RBP0.74□□□□□ -2.29
LINC00557-201ENST00000563184 PLGLB1Q02325 96 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 MIR22HGQ0VDD5 57 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 SCIMPQ6UWF3 145 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 LINC00269Q8N2A0 174 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 METTL1Q9UBP6 276 aaKnown RBP0.74□□□□□ -2.29
LINC00557-201ENST00000563184 CEP350Q5VT06 3117 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 TARBP1Q13395 1621 aaKnown RBP0.74□□□□□ -2.29
LINC00557-201ENST00000563184 DNMBPQ6XZF7 1577 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 CPS1P31327 1500 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 ABCA10Q8WWZ4 1543 aa0.74□□□□□ -2.29
LINC00557-201ENST00000563184 FGD6Q6ZV73 1430 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 UACAQ9BZF9 1416 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 CNTLNQ9NXG0 1405 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 NCOA3Q9Y6Q9 1424 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 SPTBP11277 2137 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 DSPPQ9NZW4 1301 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 KIF21AQ7Z4S6 1674 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 TRBV20-1A0A075B6N2 111 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 IGHV1-24A0A0C4DH33 117 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 C3orf85A0A1B0GTC6 90 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 FAM92AA1XBS5 289 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 A6NN06 94 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 IGLC6P0CF74 106 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 KDELR1P24390 212 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 RHOHQ15669 191 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 CASC2Q6XLA1 102 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 ATP11AUNQ6ZP68 121 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 FOXI2Q6ZQN5 318 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 C3orf62Q6ZUJ4 267 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 CTAGE3PQ8IX95 158 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 TCTEX1D1Q8N7M0 179 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 OR8J3Q8NGG0 315 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 ATP6V0E2Q8NHE4 81 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 CLEC2BQ92478 149 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 SLC35B3Q9H1N7 401 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 BANF2Q9H503 90 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 C10orf95Q9H7T3 257 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 TAF9BQ9HBM6 251 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 CCDC167Q9P0B6 97 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 EIF4G3O43432 1585 aaKnown RBP0.73□□□□□ -2.29
LINC00557-201ENST00000563184 KDM5DQ9BY66 1539 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 CCDC88BA6NC98 1476 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 FANCAO15360 1455 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 WDR7Q9Y4E6 1490 aa0.73□□□□□ -2.29
LINC00557-201ENST00000563184 SHROOM2Q13796 1616 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 CCDC171Q6TFL3 1326 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 KDM5CP41229 1560 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 TRAV23DV6A0A075B6W5 121 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 A0A1W2PPB8 328 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 A0A1W2PRS3 328 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 KIR3DP1A8MWS1 328 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 K7ERU9 68 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 M0R2P5 195 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 IGHV3-30P01768 117 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 GYPBP06028 91 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 IGHV3-30-5P0DP03 117 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 GUCA1AP43080 201 aaPredicted RBP0.72□□□□□ -2.29
LINC00557-201ENST00000563184 PCBD1P61457 104 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 COPZ1P61923 177 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 RPS25P62851 125 aaKnown RBP0.72□□□□□ -2.29
LINC00557-201ENST00000563184 SPCS2Q15005 226 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 SPATA45Q537H7 98 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 GLYATL3Q5SZD4 288 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 LINC01545Q5VT33 79 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 RPL13AP3Q6NVV1 102 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 IDO2Q6ZQW0 420 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 C5orf17Q8NAS9 161 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 COPS9Q8WXC6 57 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 SMIM3Q9BZL3 60 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms