RNA–Protein interactions for RNA: ENST00000561544.1

AC009065.7-201, humanhuman

TSL 3 BASIC

Gene AC009065.7, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009065.7-201ENST00000561544 RPL35P42766 123 aaKnown RBP8.55□□□□□ -1.04
AC009065.7-201ENST00000561544 ZNF415Q09FC8 603 aa8.55□□□□□ -1.04
AC009065.7-201ENST00000561544 TDRG1Q3Y452 100 aa8.55□□□□□ -1.04
AC009065.7-201ENST00000561544 IBA57Q5T440 356 aaKnown RBP8.55□□□□□ -1.04
AC009065.7-201ENST00000561544 TEX261Q6UWH6 196 aa8.55□□□□□ -1.04
AC009065.7-201ENST00000561544 MRPL16Q9NX20 251 aaKnown RBP8.55□□□□□ -1.04
AC009065.7-201ENST00000561544 TRGV11A0A075B6L2 103 aa8.54□□□□□ -1.04
AC009065.7-201ENST00000561544 SH2D1AO60880 128 aa8.54□□□□□ -1.04
AC009065.7-201ENST00000561544 CRIP1P50238 77 aa8.54□□□□□ -1.04
AC009065.7-201ENST00000561544 DAZ2Q13117 558 aaKnown RBP8.54□□□□□ -1.04
AC009065.7-201ENST00000561544 LINC00612Q8N6U2 182 aa8.54□□□□□ -1.04
AC009065.7-201ENST00000561544 TXNDC17Q9BRA2 123 aa8.54□□□□□ -1.04
AC009065.7-201ENST00000561544 VAX2Q9UIW0 290 aa8.54□□□□□ -1.04
AC009065.7-201ENST00000561544 ZFP30Q9Y2G7 519 aa8.54□□□□□ -1.04
AC009065.7-201ENST00000561544 KLK5Q9Y337 293 aaPredicted RBP8.54□□□□□ -1.04
AC009065.7-201ENST00000561544 ALMS1Q8TCU4 4167 aa8.53□□□□□ -1.04
AC009065.7-201ENST00000561544 TRGV1A0A0A0MS02 117 aa8.53□□□□□ -1.04
AC009065.7-201ENST00000561544 IGHV3-16A0A0C4DH30 117 aa8.53□□□□□ -1.04
AC009065.7-201ENST00000561544 IGLL5B9A064 214 aa8.53□□□□□ -1.04
AC009065.7-201ENST00000561544 PDE6DO43924 150 aa8.53□□□□□ -1.04
AC009065.7-201ENST00000561544 TOR2AQ5JU69 321 aa8.53□□□□□ -1.04
AC009065.7-201ENST00000561544 COX8CQ7Z4L0 72 aa8.53□□□□□ -1.04
AC009065.7-201ENST00000561544 SDF2L1Q9HCN8 221 aa8.53□□□□□ -1.04
AC009065.7-201ENST00000561544 MUC4Q99102 2169 aa8.52□□□□□ -1.04
AC009065.7-201ENST00000561544 NACAE9PAV3 2078 aa8.52□□□□□ -1.05
AC009065.7-201ENST00000561544 TRBV20OR9-2A0A075B6H5 130 aa8.52□□□□□ -1.05
AC009065.7-201ENST00000561544 IGHV4-4A0A075B6R2 117 aa8.52□□□□□ -1.05
AC009065.7-201ENST00000561544 IGKV3D-20A0A0C4DH25 116 aa8.52□□□□□ -1.05
AC009065.7-201ENST00000561544 RBFOX3A6NFN3 312 aa8.52□□□□□ -1.05
AC009065.7-201ENST00000561544 SPINK4O60575 86 aa8.52□□□□□ -1.05
AC009065.7-201ENST00000561544 S100A9P06702 114 aaKnown RBP8.52□□□□□ -1.05
AC009065.7-201ENST00000561544 CENPWQ5EE01 88 aa8.52□□□□□ -1.05
AC009065.7-201ENST00000561544 FAM162BQ5T6X4 162 aa8.52□□□□□ -1.05
AC009065.7-201ENST00000561544 BAGE2Q86Y30 109 aa8.52□□□□□ -1.05
AC009065.7-201ENST00000561544 KCNS1Q96KK3 526 aa8.52□□□□□ -1.05
AC009065.7-201ENST00000561544 RAB19A4D1S5 217 aa8.51□□□□□ -1.05
AC009065.7-201ENST00000561544 FABP5P3A8MUU1 101 aa8.51□□□□□ -1.05
AC009065.7-201ENST00000561544 M0R036 132 aa8.51□□□□□ -1.05
AC009065.7-201ENST00000561544 ATP5G1P05496 136 aa8.51□□□□□ -1.05
AC009065.7-201ENST00000561544 TAGLN2P37802 199 aaKnown RBP8.51□□□□□ -1.05
AC009065.7-201ENST00000561544 ZNF674Q2M3X9 581 aa8.51□□□□□ -1.05
AC009065.7-201ENST00000561544 ZNF506Q5JVG8 444 aa8.51□□□□□ -1.05
AC009065.7-201ENST00000561544 PRR27Q6MZM9 219 aa8.51□□□□□ -1.05
AC009065.7-201ENST00000561544 MLST8Q9BVC4 326 aa8.51□□□□□ -1.05
AC009065.7-201ENST00000561544 MED9Q9NWA0 146 aa8.51□□□□□ -1.05
AC009065.7-201ENST00000561544 TRGV2A0A075B6R0 118 aa8.5□□□□□ -1.05
AC009065.7-201ENST00000561544 PGPEP1LA6NFU8 196 aa8.5□□□□□ -1.05
AC009065.7-201ENST00000561544 B4DEV8 164 aa8.5□□□□□ -1.05
AC009065.7-201ENST00000561544 KRBOX1C9JBD0 128 aa8.5□□□□□ -1.05
AC009065.7-201ENST00000561544 F5H768 121 aa8.5□□□□□ -1.05
AC009065.7-201ENST00000561544 IGLV2-8P01709 118 aa8.5□□□□□ -1.05
AC009065.7-201ENST00000561544 ORM1P02763 201 aa8.5□□□□□ -1.05
AC009065.7-201ENST00000561544 HOXA5P20719 270 aa8.5□□□□□ -1.05
AC009065.7-201ENST00000561544 TMEM88Q6PEY1 159 aa8.5□□□□□ -1.05
AC009065.7-201ENST00000561544 FAM210AQ96ND0 272 aa8.5□□□□□ -1.05
AC009065.7-201ENST00000561544 APLNQ9ULZ1 77 aa8.5□□□□□ -1.05
AC009065.7-201ENST00000561544 PLECQ15149 4684 aaKnown RBP8.49□□□□□ -1.05
AC009065.7-201ENST00000561544 TMSB15BA0A087X1C1 80 aa8.49□□□□□ -1.05
AC009065.7-201ENST00000561544 LCE6AA0A183 80 aa8.49□□□□□ -1.05
AC009065.7-201ENST00000561544 IGHV3-53P01767 116 aa8.49□□□□□ -1.05
AC009065.7-201ENST00000561544 RNASE3P12724 160 aaKnown RBP8.49□□□□□ -1.05
AC009065.7-201ENST00000561544 GNG4P50150 75 aa8.49□□□□□ -1.05
AC009065.7-201ENST00000561544 RPL19P84098 196 aaKnown RBP8.49□□□□□ -1.05
AC009065.7-201ENST00000561544 C9orf85Q96MD7 179 aa8.49□□□□□ -1.05
AC009065.7-201ENST00000561544 SPXQ9BT56 116 aa8.49□□□□□ -1.05
AC009065.7-201ENST00000561544 EIF5A2Q9GZV4 153 aaKnown RBP8.49□□□□□ -1.05
AC009065.7-201ENST00000561544 KMT2CQ8NEZ4 4911 aaKnown RBP8.49□□□□□ -1.05
AC009065.7-201ENST00000561544 GRIFINA4D1Z8 144 aa8.48□□□□□ -1.05
AC009065.7-201ENST00000561544 H3BVH4 76 aa8.48□□□□□ -1.05
AC009065.7-201ENST00000561544 MGST1P10620 155 aaKnown RBP8.48□□□□□ -1.05
AC009065.7-201ENST00000561544 ASIPP42127 132 aa8.48□□□□□ -1.05
AC009065.7-201ENST00000561544 CEBPGP53567 150 aa8.48□□□□□ -1.05
AC009065.7-201ENST00000561544 LGALS9BQ3B8N2 356 aa8.48□□□□□ -1.05
AC009065.7-201ENST00000561544 LINC01559Q495D7 138 aa8.48□□□□□ -1.05
AC009065.7-201ENST00000561544 ZNF575Q86XF7 245 aa8.48□□□□□ -1.05
AC009065.7-201ENST00000561544 LINC00476Q8WZB0 136 aa8.48□□□□□ -1.05
AC009065.7-201ENST00000561544 PARLQ9H300 379 aa8.48□□□□□ -1.05
AC009065.7-201ENST00000561544 TMEM250H0YL14 139 aa8.47□□□□□ -1.05
AC009065.7-201ENST00000561544 M0R2P5 195 aa8.47□□□□□ -1.05
AC009065.7-201ENST00000561544 SFTA3P0C7M3 94 aa8.47□□□□□ -1.05
AC009065.7-201ENST00000561544 C18orf15Q96N68 181 aa8.47□□□□□ -1.05
AC009065.7-201ENST00000561544 NDUFAF3Q9BU61 184 aa8.47□□□□□ -1.05
AC009065.7-201ENST00000561544 A0A0J9YY99 117 aa8.46□□□□□ -1.06
AC009065.7-201ENST00000561544 C9JCJ5 164 aa8.46□□□□□ -1.06
AC009065.7-201ENST00000561544 S100A4P26447 101 aaKnown RBP8.46□□□□□ -1.06
AC009065.7-201ENST00000561544 SRSF3P84103 164 aaKnown RBP8.46□□□□□ -1.06
AC009065.7-201ENST00000561544 IFITM2Q01629 132 aa8.46□□□□□ -1.06
AC009065.7-201ENST00000561544 OR5I1Q13606 314 aa8.46□□□□□ -1.06
AC009065.7-201ENST00000561544 POM121L12Q8N7R1 296 aa8.46□□□□□ -1.06
AC009065.7-201ENST00000561544 RASL10AQ92737 203 aa8.46□□□□□ -1.06
AC009065.7-201ENST00000561544 ZNF479Q96JC4 524 aa8.46□□□□□ -1.06
AC009065.7-201ENST00000561544 TRAV26-1A0A087WT03 109 aa8.45□□□□□ -1.06
AC009065.7-201ENST00000561544 C9JQL5 133 aa8.45□□□□□ -1.06
AC009065.7-201ENST00000561544 K7EN84 100 aa8.45□□□□□ -1.06
AC009065.7-201ENST00000561544 LY6G6CO95867 125 aa8.45□□□□□ -1.06
AC009065.7-201ENST00000561544 SRP19P09132 144 aaKnown RBP8.45□□□□□ -1.06
AC009065.7-201ENST00000561544 TCTAP57738 103 aa8.45□□□□□ -1.06
AC009065.7-201ENST00000561544 ZNF876PQ49A33 203 aa8.45□□□□□ -1.06
AC009065.7-201ENST00000561544 SMIM12Q96EX1 92 aa8.45□□□□□ -1.06
AC009065.7-201ENST00000561544 FAM210BQ96KR6 192 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms