RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 INSL4Q14641 139 aa-1.84□□□□□ -2.7
CASC4-211ENST00000561305 OR4C12Q96R67 309 aa-1.84□□□□□ -2.7
CASC4-211ENST00000561305 COMMD3Q9UBI1 195 aa-1.84□□□□□ -2.7
CASC4-211ENST00000561305 DNAH9Q9NYC9 4486 aa-1.84□□□□□ -2.7
CASC4-211ENST00000561305 AKAP9Q99996 3911 aa-1.85□□□□□ -2.7
CASC4-211ENST00000561305 TEX49A0A1B0GTD5 131 aa-1.85□□□□□ -2.71
CASC4-211ENST00000561305 TMEM30CPA0ZSE6 113 aa-1.85□□□□□ -2.71
CASC4-211ENST00000561305 BBIP1A8MTZ0 92 aa-1.85□□□□□ -2.71
CASC4-211ENST00000561305 TMEM14DPA8MWL7 114 aa-1.85□□□□□ -2.71
CASC4-211ENST00000561305 COX4I1P13073 169 aa-1.85□□□□□ -2.71
CASC4-211ENST00000561305 IFT20Q8IY31 132 aa-1.85□□□□□ -2.71
CASC4-211ENST00000561305 ADGRL3Q9HAR2 1447 aa-1.85□□□□□ -2.71
CASC4-211ENST00000561305 NINQ8N4C6 2090 aa-1.86□□□□□ -2.71
CASC4-211ENST00000561305 DNAJC13O75165 2243 aa-1.86□□□□□ -2.71
CASC4-211ENST00000561305 SMIM23A6NLE4 172 aa-1.86□□□□□ -2.71
CASC4-211ENST00000561305 HMGB3O15347 200 aaKnown RBP-1.86□□□□□ -2.71
CASC4-211ENST00000561305 CCKP06307 115 aa-1.86□□□□□ -2.71
CASC4-211ENST00000561305 SDC4P31431 198 aa-1.86□□□□□ -2.71
CASC4-211ENST00000561305 TAS2R41P59536 307 aa-1.86□□□□□ -2.71
CASC4-211ENST00000561305 LYPD5Q6UWN5 251 aa-1.86□□□□□ -2.71
CASC4-211ENST00000561305 ATG5Q9H1Y0 275 aa-1.86□□□□□ -2.71
CASC4-211ENST00000561305 BATF3Q9NR55 127 aa-1.86□□□□□ -2.71
CASC4-211ENST00000561305 LAMA3Q16787 3333 aa-1.86□□□□□ -2.71
CASC4-211ENST00000561305 GOLGA3Q08378 1498 aa-1.87□□□□□ -2.71
CASC4-211ENST00000561305 FXYD6-FXYD2A0A087WZ82 144 aa-1.87□□□□□ -2.71
CASC4-211ENST00000561305 TRBV10-3A0A0K0K1G6 114 aa-1.87□□□□□ -2.71
CASC4-211ENST00000561305 LOC107984640A0A0U1RRK4 108 aa-1.87□□□□□ -2.71
CASC4-211ENST00000561305 ZNF670-ZNF695F2Z2N8 137 aa-1.87□□□□□ -2.71
CASC4-211ENST00000561305 G3V318 75 aa-1.87□□□□□ -2.71
CASC4-211ENST00000561305 CST7O76096 145 aa-1.87□□□□□ -2.71
CASC4-211ENST00000561305 IGKCP01834 107 aa-1.87□□□□□ -2.71
CASC4-211ENST00000561305 MT1AP04731 61 aa-1.87□□□□□ -2.71
CASC4-211ENST00000561305 SPRR1BP22528 89 aa-1.87□□□□□ -2.71
CASC4-211ENST00000561305 DCDP81605 110 aaKnown RBP-1.87□□□□□ -2.71
CASC4-211ENST00000561305 CIB3Q96Q77 187 aaPredicted RBP-1.87□□□□□ -2.71
CASC4-211ENST00000561305 SIGMAR1Q99720 223 aa-1.87□□□□□ -2.71
CASC4-211ENST00000561305 TPRKBQ9Y3C4 175 aa-1.87□□□□□ -2.71
CASC4-211ENST00000561305 TSC2P49815 1807 aa-1.87□□□□□ -2.71
CASC4-211ENST00000561305 DOCK11Q5JSL3 2073 aa-1.87□□□□□ -2.71
CASC4-211ENST00000561305 DNHD1Q96M86 4753 aa-1.87□□□□□ -2.71
CASC4-211ENST00000561305 CUBNO60494 3623 aa-1.87□□□□□ -2.71
CASC4-211ENST00000561305 C3orf85A0A1B0GTC6 90 aa-1.88□□□□□ -2.71
CASC4-211ENST00000561305 RBAKDNA6NC62 111 aa-1.88□□□□□ -2.71
CASC4-211ENST00000561305 ARL5CA6NH57 179 aa-1.88□□□□□ -2.71
CASC4-211ENST00000561305 APOC4-APOC2K7ER74 178 aa-1.88□□□□□ -2.71
CASC4-211ENST00000561305 PIN1P1O15428 100 aa-1.88□□□□□ -2.71
CASC4-211ENST00000561305 SPINK4O60575 86 aa-1.88□□□□□ -2.71
CASC4-211ENST00000561305 BANF1O75531 89 aa-1.88□□□□□ -2.71
CASC4-211ENST00000561305 LYPLA2O95372 231 aa-1.88□□□□□ -2.71
CASC4-211ENST00000561305 ACYP2P14621 99 aa-1.88□□□□□ -2.71
CASC4-211ENST00000561305 LSM6P62312 80 aaKnown RBP-1.88□□□□□ -2.71
CASC4-211ENST00000561305 TAF1AQ15573 450 aaPredicted RBP-1.88□□□□□ -2.71
CASC4-211ENST00000561305 DEFB135Q30KP9 77 aa-1.88□□□□□ -2.71
CASC4-211ENST00000561305 TMEM229BQ8NBD8 167 aa-1.88□□□□□ -2.71
CASC4-211ENST00000561305 OR4B1Q8NGF8 309 aa-1.88□□□□□ -2.71
CASC4-211ENST00000561305 OR10X1Q8NGY0 326 aa-1.88□□□□□ -2.71
CASC4-211ENST00000561305 C19orf12Q9NSK7 152 aa-1.88□□□□□ -2.71
CASC4-211ENST00000561305 PIK3C2AO00443 1686 aa-1.88□□□□□ -2.71
CASC4-211ENST00000561305 TRGV1A0A0A0MS02 117 aa-1.89□□□□□ -2.71
CASC4-211ENST00000561305 IFITM5A6NNB3 132 aa-1.89□□□□□ -2.71
CASC4-211ENST00000561305 RPP14O95059 124 aaKnown RBP-1.89□□□□□ -2.71
CASC4-211ENST00000561305 TRGC2P03986 189 aa-1.89□□□□□ -2.71
CASC4-211ENST00000561305 RPS17P08708 135 aaKnown RBP-1.89□□□□□ -2.71
CASC4-211ENST00000561305 CYBAP13498 195 aa-1.89□□□□□ -2.71
CASC4-211ENST00000561305 MSMO1Q15800 293 aa-1.89□□□□□ -2.71
CASC4-211ENST00000561305 IQCJQ1A5X6 159 aa-1.89□□□□□ -2.71
CASC4-211ENST00000561305 AKIRIN2Q53H80 203 aa-1.89□□□□□ -2.71
CASC4-211ENST00000561305 FKBP1CQ5VVH2 108 aa-1.89□□□□□ -2.71
CASC4-211ENST00000561305 UNQ5815/PRO19632Q6UWF5 114 aa-1.89□□□□□ -2.71
CASC4-211ENST00000561305 SLC22A13Q9Y226 551 aa-1.89□□□□□ -2.71
CASC4-211ENST00000561305 AKAP13Q12802 2813 aa-1.89□□□□□ -2.71
CASC4-211ENST00000561305 TEX15Q9BXT5 2789 aa-1.89□□□□□ -2.71
CASC4-211ENST00000561305 USP54Q70EL1 1684 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 ZFYVE9O95405 1425 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 FGD6Q6ZV73 1430 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 KIAA1107Q9UPP5 1409 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 ANK3Q12955 4377 aaKnown RBP-1.9□□□□□ -2.71
CASC4-211ENST00000561305 TRBV7-1A0A0A6YYK4 115 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 ATP5HO75947 161 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 COX6B1P14854 86 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 CAPZBP47756 277 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 DNAJB13P59910 316 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 HAMPP81172 84 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 ITGB3BPQ13352 177 aaPredicted RBP-1.9□□□□□ -2.71
CASC4-211ENST00000561305 COTL1Q14019 142 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 RHOHQ15669 191 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 DEFB112Q30KQ8 113 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 CCSMST1Q4G0I0 132 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 OR8J3Q8NGG0 315 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 BTF3L4Q96K17 158 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 NMNAT1Q9HAN9 279 aaPredicted RBP-1.9□□□□□ -2.71
CASC4-211ENST00000561305 TP53AIP1Q9HCN2 124 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 ARAP1Q96P48 1450 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 WDR7Q9Y4E6 1490 aa-1.9□□□□□ -2.71
CASC4-211ENST00000561305 ANKRD11Q6UB99 2663 aaPredicted RBP-1.91□□□□□ -2.71
CASC4-211ENST00000561305 DSPP15924 2871 aaKnown RBP-1.91□□□□□ -2.71
CASC4-211ENST00000561305 TRBV10-1A0A0K0K1A3 114 aa-1.91□□□□□ -2.72
CASC4-211ENST00000561305 TMEM114B3SHH9 223 aa-1.91□□□□□ -2.72
CASC4-211ENST00000561305 BCL2P10415 239 aa-1.91□□□□□ -2.72
CASC4-211ENST00000561305 IL7P13232 177 aa-1.91□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms