RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CACNA1SQ13698 1873 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 BAHCC1Q9P281 2608 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 CASZ1Q86V15 1759 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 PLCH1Q4KWH8 1693 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 PCM1Q15154 2024 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 NUP205Q92621 2012 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 IGLV3-9A0A075B6K5 115 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 IGKV2D-26A0A0A0MRZ7 120 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 SPAARA0A1B0GVQ0 90 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 A0A1W2PRS3 328 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 TCRBV3S1A0A5B6 114 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 C5orf67F2Z3F1 127 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 CCL25O15444 150 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 ZNF737O75373 536 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 IGKV3-11P04433 115 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 CXCL8P10145 99 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 CCL4P13236 92 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 MIFP14174 115 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 FAM74A1Q5RGS3 127 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 C1orf134Q5TEV5 83 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 Q6ZTI0 123 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 LYPD1Q8N2G4 141 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 TTC9CQ8N5M4 171 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 Q8N814 137 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 CCL4L1Q8NHW4 92 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 DYNLRB2Q8TF09 96 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 TSKUQ8WUA8 353 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 Q9BRP9 147 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 PRR34Q9NV39 138 aa1.24□□□□□ -2.21
RTF1-207ENST00000561076 KMT2BQ9UMN6 2715 aaPredicted RBP1.24□□□□□ -2.21
RTF1-207ENST00000561076 COL1A1P02452 1464 aaPredicted RBP1.24□□□□□ -2.21
RTF1-207ENST00000561076 ZNF609O15014 1411 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 DAPK1P53355 1430 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 XRN1Q8IZH2 1706 aaKnown RBP1.23□□□□□ -2.21
RTF1-207ENST00000561076 ARHGEF28Q8N1W1 1705 aaKnown RBP1.23□□□□□ -2.21
RTF1-207ENST00000561076 ANKRD36BQ8N2N9 1353 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 CROCC2H7BZ55 1655 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 KIF1AQ12756 1690 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 OBSL1O75147 1896 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 TRAV2A0A0B4J234 112 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 MUC21A0A0G2JKD1 596 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 MUC21A0A140T8X8 626 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 ODF3BA8MYP8 253 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 E7EQL1 145 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 E7EUB6 86 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 TMEM262E9PQX1 116 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 F8W1H4 67 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 H3BRM9 83 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 CLPSP04118 112 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 PIRTP0C851 137 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 HRES1P13985 223 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 ADCYAP1P18509 176 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 ATP5EP56381 51 aaPredicted RBP1.23□□□□□ -2.21
RTF1-207ENST00000561076 ROMO1P60602 79 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 UBA52P62987 128 aaKnown RBP1.23□□□□□ -2.21
RTF1-207ENST00000561076 ZNF791Q3KP31 576 aaPredicted RBP1.23□□□□□ -2.21
RTF1-207ENST00000561076 LCE4AQ5TA78 99 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 Q6AWC8 147 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 SLC25A26Q70HW3 274 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 SMIM5Q71RC9 77 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 Q8IYB0 196 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 C5orf17Q8NAS9 161 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 VAMP8Q9BV40 100 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 DPY30Q9C005 99 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 ATG5Q9H1Y0 275 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 SCP2D1Q9UJQ7 156 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 MEGF6O75095 1541 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 RGPD3A6NKT7 1758 aaPredicted RBP1.23□□□□□ -2.21
RTF1-207ENST00000561076 MAST2Q6P0Q8 1798 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 RGPD4Q7Z3J3 1758 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 UBR2Q8IWV8 1755 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 CUL9Q8IWT3 2517 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 THADAQ6YHU6 1953 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 PPIP5K1Q6PFW1 1433 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 TOPAZ1Q8N9V7 1692 aa1.23□□□□□ -2.21
RTF1-207ENST00000561076 PDE4DIPQ5VU43 2346 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 ARID1AO14497 2285 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 ATRXP46100 2492 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 SLIT3O75094 1523 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 TRAV12-1A0A0B4J245 112 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 A0A1W2PNM2 257 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 IBA57-AS1B1ANH7 110 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 RTL8CO15255 209 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 GYPBP06028 91 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 DCDP81605 110 aaKnown RBP1.22□□□□□ -2.21
RTF1-207ENST00000561076 S100A7L2Q5SY68 101 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 KRTAP19-1Q8IUB9 90 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 DEFB123Q8N688 67 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 OR10AG1Q8NH19 301 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 MYOZ3Q8TDC0 251 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 LINC00526Q96FQ7 95 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 C20orf166-AS1Q96NR2 134 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 ORMDL1Q9P0S3 153 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 NRAPQ86VF7 1730 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 LRRIQ1Q96JM4 1722 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 TRPM3Q9HCF6 1732 aaPredicted RBP1.22□□□□□ -2.21
RTF1-207ENST00000561076 GCC2Q8IWJ2 1684 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 FER1L6Q2WGJ9 1857 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 NUP210LQ5VU65 1888 aa1.22□□□□□ -2.21
RTF1-207ENST00000561076 CDK5RAP2Q96SN8 1893 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms