RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 TSC22D3Q99576 134 aa0.8□□□□□ -2.28
USP8-211ENST00000560527 NABP2Q9BQ15 211 aa0.8□□□□□ -2.28
USP8-211ENST00000560527 SPANXA1Q9NS26 97 aa0.8□□□□□ -2.28
USP8-211ENST00000560527 HSPB8Q9UJY1 196 aa0.8□□□□□ -2.28
USP8-211ENST00000560527 HIGD1AQ9Y241 93 aa0.8□□□□□ -2.28
USP8-211ENST00000560527 ZDBF2Q9HCK1 2354 aa0.8□□□□□ -2.28
USP8-211ENST00000560527 PPRC1Q5VV67 1664 aaKnown RBP0.8□□□□□ -2.28
USP8-211ENST00000560527 FAM208BQ5VWN6 2430 aa0.8□□□□□ -2.28
USP8-211ENST00000560527 CSMD1Q96PZ7 3565 aa0.8□□□□□ -2.28
USP8-211ENST00000560527 SOGA1O94964 1423 aa0.8□□□□□ -2.28
USP8-211ENST00000560527 ASPMQ8IZT6 3477 aa0.8□□□□□ -2.28
USP8-211ENST00000560527 CUX1P39880 1505 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 MAP1BP46821 2468 aaKnown RBP0.79□□□□□ -2.28
USP8-211ENST00000560527 DIP2BQ9P265 1576 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 LRRK2Q5S007 2527 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 KIAA0556O60303 1618 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 MADDQ8WXG6 1647 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 C3orf85A0A1B0GTC6 90 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 DPM2O94777 84 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 PPYP01298 95 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 TRACP01848 142 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 SLC25A5P05141 298 aaKnown RBP0.79□□□□□ -2.28
USP8-211ENST00000560527 PAEPP09466 180 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 SLC25A4P12235 298 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 SRP9P49458 86 aaKnown RBP0.79□□□□□ -2.28
USP8-211ENST00000560527 GTF2A1P52655 376 aaPredicted RBP0.79□□□□□ -2.28
USP8-211ENST00000560527 HIST1H1AQ02539 215 aaPredicted RBP0.79□□□□□ -2.28
USP8-211ENST00000560527 TMEM244Q5VVB8 128 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 LINC00322Q6ZN03 302 aaPredicted RBP0.79□□□□□ -2.28
USP8-211ENST00000560527 TSTD1Q8NFU3 115 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 OR5A2Q8NGI9 324 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 OR5AK2Q8NH90 309 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 AP1S3Q96PC3 154 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 VPS25Q9BRG1 176 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 LIMD2Q9BT23 127 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 SMIM3Q9BZL3 60 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 CST11Q9H112 138 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 TMEM14CQ9P0S9 112 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 COPZ2Q9P299 210 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 HERC1Q15751 4861 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 PDZD2O15018 2839 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 LAMA4Q16363 1823 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 DSPPQ9NZW4 1301 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 CFAP54Q96N23 3096 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 EML5Q05BV3 1969 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 C5orf42Q9H799 3197 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 GOLGB1Q14789 3259 aaKnown RBP0.79□□□□□ -2.28
USP8-211ENST00000560527 SPEGQ15772 3267 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 BSNQ9UPA5 3926 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 SNRNP200O75643 2136 aaKnown RBP0.79□□□□□ -2.28
USP8-211ENST00000560527 AHNAK2Q8IVF2 5795 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 UNC13CQ8NB66 2214 aa0.79□□□□□ -2.28
USP8-211ENST00000560527 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.78□□□□□ -2.28
USP8-211ENST00000560527 A0A096LPI6 279 aa0.78□□□□□ -2.28
USP8-211ENST00000560527 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.78□□□□□ -2.28
USP8-211ENST00000560527 BORCS7-ASMTA0A0B4J1R7 106 aa0.78□□□□□ -2.28
USP8-211ENST00000560527 LOC107984156A0A0G2JMH3 177 aa0.78□□□□□ -2.28
USP8-211ENST00000560527 A0A1B0GV90 55 aa0.78□□□□□ -2.28
USP8-211ENST00000560527 OR2H2O95918 312 aa0.78□□□□□ -2.28
USP8-211ENST00000560527 HBDP02042 147 aa0.78□□□□□ -2.28
USP8-211ENST00000560527 TCRAP04437 139 aa0.78□□□□□ -2.28
USP8-211ENST00000560527 DBIP07108 87 aaKnown RBP0.78□□□□□ -2.28
USP8-211ENST00000560527 BLCAPP62952 87 aa0.78□□□□□ -2.28
USP8-211ENST00000560527 KRTAP20-1Q3LI63 56 aa0.78□□□□□ -2.28
USP8-211ENST00000560527 ARL17AQ8IVW1 177 aa0.78□□□□□ -2.28
USP8-211ENST00000560527 TCTE3Q8IZS6 198 aa0.78□□□□□ -2.28
USP8-211ENST00000560527 ZNF431Q8TF32 576 aaPredicted RBP0.78□□□□□ -2.28
USP8-211ENST00000560527 PRO3102Q9H379 93 aa0.78□□□□□ -2.28
USP8-211ENST00000560527 CALML5Q9NZT1 146 aa0.78□□□□□ -2.28
USP8-211ENST00000560527 PAIP2BQ9ULR5 123 aaKnown RBP0.78□□□□□ -2.28
USP8-211ENST00000560527 CCDC171Q6TFL3 1326 aa0.78□□□□□ -2.28
USP8-211ENST00000560527 MED23Q9ULK4 1368 aa0.78□□□□□ -2.28
USP8-211ENST00000560527 EFCAB6Q5THR3 1501 aa0.78□□□□□ -2.28
USP8-211ENST00000560527 NRKQ7Z2Y5 1582 aa0.78□□□□□ -2.29
USP8-211ENST00000560527 KIF21BO75037 1637 aa0.78□□□□□ -2.29
USP8-211ENST00000560527 PIEZO2Q9H5I5 2752 aa0.78□□□□□ -2.29
USP8-211ENST00000560527 PEAK1Q9H792 1746 aa0.78□□□□□ -2.29
USP8-211ENST00000560527 BOD1L1Q8NFC6 3051 aa0.78□□□□□ -2.29
USP8-211ENST00000560527 FREM3P0C091 2139 aa0.77□□□□□ -2.29
USP8-211ENST00000560527 HEATR1Q9H583 2144 aaKnown RBP0.77□□□□□ -2.29
USP8-211ENST00000560527 MEGF8Q7Z7M0 2845 aa0.77□□□□□ -2.29
USP8-211ENST00000560527 PKD1L1Q8TDX9 2849 aa0.77□□□□□ -2.29
USP8-211ENST00000560527 LOC107986453A0A1B0GWG9 222 aa0.77□□□□□ -2.29
USP8-211ENST00000560527 K7ERU9 68 aa0.77□□□□□ -2.29
USP8-211ENST00000560527 M0R2Z0 102 aa0.77□□□□□ -2.29
USP8-211ENST00000560527 SAA1P0DJI8 122 aaPredicted RBP0.77□□□□□ -2.29
USP8-211ENST00000560527 MPC1LP0DKB6 136 aa0.77□□□□□ -2.29
USP8-211ENST00000560527 NEDD8Q15843 81 aa0.77□□□□□ -2.29
USP8-211ENST00000560527 HSD17B12Q53GQ0 312 aa0.77□□□□□ -2.29
USP8-211ENST00000560527 HAGHLQ6PII5 290 aaPredicted RBP0.77□□□□□ -2.29
USP8-211ENST00000560527 CASC2Q6XLA1 102 aa0.77□□□□□ -2.29
USP8-211ENST00000560527 OR10AG1Q8NH19 301 aa0.77□□□□□ -2.29
USP8-211ENST00000560527 WFDC10AQ9H1F0 79 aa0.77□□□□□ -2.29
USP8-211ENST00000560527 TNFSF18Q9UNG2 199 aa0.77□□□□□ -2.29
USP8-211ENST00000560527 HERC2O95714 4834 aa0.77□□□□□ -2.29
USP8-211ENST00000560527 PLXNA4Q9HCM2 1894 aa0.77□□□□□ -2.29
USP8-211ENST00000560527 CNOT1A5YKK6 2376 aaKnown RBP0.77□□□□□ -2.29
USP8-211ENST00000560527 ACACBO00763 2458 aa0.77□□□□□ -2.29
USP8-211ENST00000560527 TLN1Q9Y490 2541 aaKnown RBP0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms