RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 CHKB-CPT1BH3BT56 60 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 FUSP35637 526 aaKnown RBP eCLIP2.89□□□□□ -1.95
ATXN3-248ENST00000558190 RNASE6Q93091 150 aaKnown RBP2.89□□□□□ -1.95
ATXN3-248ENST00000558190 THBDP07204 575 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 THAP8Q8NA92 274 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 ODF1Q14990 250 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 ZNF491Q8N8L2 437 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 PSMB8P28062 276 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 SLX4Q8IY92 1834 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 HHLA3Q9XRX5 114 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 IGHV4-28A0A0C4DH34 117 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 ATOX1O00244 68 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 H3BT86 120 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 MRPL53Q96EL3 112 aaKnown RBP2.88□□□□□ -1.95
ATXN3-248ENST00000558190 CFHR3Q02985 330 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 MBD3L2Q8NHZ7 208 aaPredicted RBP2.88□□□□□ -1.95
ATXN3-248ENST00000558190 ECM29Q5VYK3 1845 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 DIAPH2-AS1Q14236 149 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 BAALCQ8WXS3 180 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 IMUPQ9GZP8 106 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 RETNQ9HD89 108 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 POLR2AP24928 1970 aaKnown RBP2.88□□□□□ -1.95
ATXN3-248ENST00000558190 COX7A2LO14548 114 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 XGP55808 180 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 KIAA1217Q5T5P2 1943 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 IGLV2-8P01709 118 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 NRGNQ92686 78 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 LINC00526Q96FQ7 95 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 NAV1Q8NEY1 1877 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 ADAMTSL3P82987 1691 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 GNLYP22749 145 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 A0A1W2PRX2 142 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 NPBQ8NG41 125 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 IGLV3-12A0A075B6K2 115 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 IGKV2D-26A0A0A0MRZ7 120 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 ELANEP08246 267 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 FLG2Q5D862 2391 aaPredicted RBP2.88□□□□□ -1.95
ATXN3-248ENST00000558190 SND1-IT1Q9HBX3 110 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 C19orf71A6NCJ1 209 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 MRPS12O15235 138 aaKnown RBP2.88□□□□□ -1.95
ATXN3-248ENST00000558190 OTOFQ9HC10 1997 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 TRBV30A0A0K0K1B3 111 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 C11orf86A6NJI1 115 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 C14orf132Q9NPU4 83 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 ADGRB1O14514 1584 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 BUB3O43684 328 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 MP68P56378 58 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 ODF3L1Q8IXM7 274 aa2.88□□□□□ -1.95
ATXN3-248ENST00000558190 SPRR3Q9UBC9 169 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 MBD6Q96DN6 1003 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 GAFA1Q96PS6 74 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 ERCC6L2Q5T890 1561 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 Q6Q795 121 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 Q86TA4 180 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 ZNF22P17026 224 aaPredicted RBP2.87□□□□□ -1.95
ATXN3-248ENST00000558190 TMEM61Q8N0U2 210 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 IGHV1OR15-1A0A075B7D0 117 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 IGKV1-17P01599 117 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 KLK5Q9Y337 293 aaPredicted RBP2.87□□□□□ -1.95
ATXN3-248ENST00000558190 FANCD2OSQ96PS1 177 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 ANKRD36CQ5JPF3 1778 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 IGLV2-14P01704 120 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 BRWD1-AS2P59051 145 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 Q71RC1 249 aaPredicted RBP2.87□□□□□ -1.95
ATXN3-248ENST00000558190 IGHV1-18A0A0C4DH31 117 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 VMO1Q7Z5L0 202 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 NEXN-AS1Q8NBZ9 246 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 VPREB3Q9UKI3 123 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 NCR3O14931 201 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 DEFB131AP59861 70 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 PROP1O75360 226 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 SPRNQ5BIV9 151 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 Q6ZS92 163 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 MLST8Q9BVC4 326 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 UBR2Q8IWV8 1755 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 SPATA25Q9BR10 227 aa2.87□□□□□ -1.95
ATXN3-248ENST00000558190 PDE6GP18545 87 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 MYOM1P52179 1685 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 MINOS1Q5TGZ0 78 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 C1orf162Q8NEQ5 155 aaPredicted RBP2.86□□□□□ -1.95
ATXN3-248ENST00000558190 LAMB4A4D0S4 1761 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 FOXL2NBQ6ZUU3 175 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 MDFICQ9P1T7 246 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 SNURFQ9Y675 71 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 COX7CP15954 63 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 TP73-AS1Q9UF72 201 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 GGNQ86UU5 652 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 ALS2Q96Q42 1657 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 E7EUB6 86 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 ARFGEF2Q9Y6D5 1785 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 PCNX3Q9H6A9 2034 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 TMEM256-PLSCR3K7ERE1 68 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 IGF2BP2-AS1Q96M15 143 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 CRYGBP07316 175 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 KLK9Q9UKQ9 250 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 FGF23Q9GZV9 251 aaPredicted RBP2.86□□□□□ -1.95
ATXN3-248ENST00000558190 LHBP01229 141 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 IGFBPL1Q8WX77 278 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 SERP1Q9Y6X1 66 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 IGLV3-9A0A075B6K5 115 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms