RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	KRTAP4-8	A0A0G2JLE6	195 aa		6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	TRBV7-9	A0A0J9YWB2	115 aa		6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	GAGE12B	A1L429	117 aa		6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	GAGE7	O76087	117 aa		6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	GCG	P01275	180 aa		6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	GAGE12F	P0CL80	117 aa		6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	GAGE12G	P0CL81	117 aa		6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	GAGE12I	P0CL82	117 aa		6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	RAB5C	P51148	216 aa		6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	SRSF3	P84103	164 aa	Known RBP	6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778		Q6ZTI0	123 aa		6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	EIF4E3	Q8N5X7	224 aa	Known RBP	6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	NHLRC2	Q8NBF2	726 aa		6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	TMEM263	Q8WUH6	116 aa	Known RBP	6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	C16orf74	Q96GX8	76 aa		6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	LINC00467	Q9BRT7	94 aa		6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	DERL1	Q9BUN8	251 aa		6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	VPS13D	Q5THJ4	4388 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	SERTM2	A0A1B0GWG4	89 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	NUPR2	A6NF83	97 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	C11orf94	C9JXX5	98 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	TEX46	H3BTG2	121 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778		K7EQM0	130 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	DAD1	P61803	113 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	TMEM183B	Q1AE95	376 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	KRTAP19-4	Q3LI73	84 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	ZNF493	Q6ZR52	646 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778		Q86TA4	180 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	ZNF575	Q86XF7	245 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	TMEM183A	Q8IXX5	376 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	C2CD4C	Q8TF44	421 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	HIST1H2BA	Q96A08	127 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	ZC2HC1A	Q96GY0	325 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	LYST	Q99698	3801 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	NKX6-2	Q9C056	277 aa	Predicted RBP	6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	LENEP	Q9Y5L5	61 aa		6.22	□□□□□ -1.41
PRKCH-222	ENST00000556778	TRAV10	A0A0B4J240	114 aa		6.21	□□□□□ -1.42
PRKCH-222	ENST00000556778	TRAV21	A0A0B4J279	112 aa		6.21	□□□□□ -1.42
PRKCH-222	ENST00000556778	IGKV3D-20	A0A0C4DH25	116 aa		6.21	□□□□□ -1.42
PRKCH-222	ENST00000556778	IGHV3-16	A0A0C4DH30	117 aa		6.21	□□□□□ -1.42
PRKCH-222	ENST00000556778	RAB19	A4D1S5	217 aa		6.21	□□□□□ -1.42
PRKCH-222	ENST00000556778	LYRM9	A8MSI8	78 aa		6.21	□□□□□ -1.42
PRKCH-222	ENST00000556778	TYMS	P04818	313 aa		6.21	□□□□□ -1.42
PRKCH-222	ENST00000556778	HOXA5	P20719	270 aa		6.21	□□□□□ -1.42
PRKCH-222	ENST00000556778	SAPCD1	Q5SSQ6	148 aa		6.21	□□□□□ -1.42
PRKCH-222	ENST00000556778	FAM159A	Q6UWV7	190 aa		6.21	□□□□□ -1.42
PRKCH-222	ENST00000556778	LINC00612	Q8N6U2	182 aa		6.21	□□□□□ -1.42
PRKCH-222	ENST00000556778	ZNF680	Q8NEM1	530 aa		6.21	□□□□□ -1.42
PRKCH-222	ENST00000556778	MRPL16	Q9NX20	251 aa	Known RBP	6.21	□□□□□ -1.42
PRKCH-222	ENST00000556778	APLN	Q9ULZ1	77 aa		6.21	□□□□□ -1.42
PRKCH-222	ENST00000556778	IGHV4-4	A0A075B6R2	117 aa		6.2	□□□□□ -1.42
PRKCH-222	ENST00000556778	TRGV1	A0A0A0MS02	117 aa		6.2	□□□□□ -1.42
PRKCH-222	ENST00000556778	SNURFL	B1AK76	121 aa		6.2	□□□□□ -1.42
PRKCH-222	ENST00000556778		F5H768	121 aa		6.2	□□□□□ -1.42
PRKCH-222	ENST00000556778	SPINK4	O60575	86 aa		6.2	□□□□□ -1.42
PRKCH-222	ENST00000556778	LTA	P01374	205 aa		6.2	□□□□□ -1.42
PRKCH-222	ENST00000556778	PFN1	P07737	140 aa	Known RBP	6.2	□□□□□ -1.42
PRKCH-222	ENST00000556778	AKR1C3	P42330	323 aa		6.2	□□□□□ -1.42
PRKCH-222	ENST00000556778	UBE2G1	P62253	170 aa		6.2	□□□□□ -1.42
PRKCH-222	ENST00000556778	DAZ2	Q13117	558 aa	Known RBP	6.2	□□□□□ -1.42
PRKCH-222	ENST00000556778	SMUG1	Q53HV7	270 aa		6.2	□□□□□ -1.42
PRKCH-222	ENST00000556778	NDFIP1	Q9BT67	221 aa		6.2	□□□□□ -1.42
PRKCH-222	ENST00000556778	KLK5	Q9Y337	293 aa	Predicted RBP	6.2	□□□□□ -1.42
PRKCH-222	ENST00000556778	TMSB15B	A0A087X1C1	80 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778	TRBV6-1	A0A0K0K1D8	114 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778	LCE6A	A0A183	80 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778	GRIFIN	A4D1Z8	144 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778	PGPEP1L	A6NFU8	196 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778		M0R036	132 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778	SH2D1A	O60880	128 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778	LY6G6C	O95867	125 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778	IGHV3-53	P01767	116 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778	RPL35	P42766	123 aa	Known RBP	6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778	PPT1	P50897	306 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778	TCL1A	P56279	114 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778	OR5I1	Q13606	314 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778	TDRG1	Q3Y452	100 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778	TMEM88	Q6PEY1	159 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778	LYPD6B	Q8NI32	183 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778	FMC1	Q96HJ9	113 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778	MANBAL	Q9NQG1	85 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778	PLA2G2D	Q9UNK4	145 aa		6.19	□□□□□ -1.42
PRKCH-222	ENST00000556778		A0A0J9YY99	117 aa		6.18	□□□□□ -1.42
PRKCH-222	ENST00000556778	FABP5P3	A8MUU1	101 aa		6.18	□□□□□ -1.42
PRKCH-222	ENST00000556778	IGLV2-8	P01709	118 aa		6.18	□□□□□ -1.42
PRKCH-222	ENST00000556778	BCL2	P10415	239 aa		6.18	□□□□□ -1.42
PRKCH-222	ENST00000556778	BLOC1S1	P78537	153 aa		6.18	□□□□□ -1.42
PRKCH-222	ENST00000556778	RPL19	P84098	196 aa	Known RBP	6.18	□□□□□ -1.42
PRKCH-222	ENST00000556778	MEF2B	Q02080	365 aa	Predicted RBP	6.18	□□□□□ -1.42
PRKCH-222	ENST00000556778	IBA57	Q5T440	356 aa	Known RBP	6.18	□□□□□ -1.42
PRKCH-222	ENST00000556778	LCE4A	Q5TA78	99 aa		6.18	□□□□□ -1.42
PRKCH-222	ENST00000556778	TEX261	Q6UWH6	196 aa		6.18	□□□□□ -1.42
PRKCH-222	ENST00000556778	BAGE2	Q86Y30	109 aa		6.18	□□□□□ -1.42
PRKCH-222	ENST00000556778	POM121L12	Q8N7R1	296 aa		6.18	□□□□□ -1.42
PRKCH-222	ENST00000556778	MLST8	Q9BVC4	326 aa		6.18	□□□□□ -1.42
PRKCH-222	ENST00000556778	SDF2L1	Q9HCN8	221 aa		6.18	□□□□□ -1.42
PRKCH-222	ENST00000556778	MED9	Q9NWA0	146 aa		6.18	□□□□□ -1.42
PRKCH-222	ENST00000556778	VAX2	Q9UIW0	290 aa		6.18	□□□□□ -1.42
PRKCH-222	ENST00000556778	ZFP30	Q9Y2G7	519 aa		6.18	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms