RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 FHL2Q14192 279 aa5.61□□□□□ -1.51
VTI1B-206ENST00000556461 TDRG1Q3Y452 100 aa5.61□□□□□ -1.51
VTI1B-206ENST00000556461 AKR1C8PQ5T2L2 129 aa5.61□□□□□ -1.51
VTI1B-206ENST00000556461 FAM159AQ6UWV7 190 aa5.61□□□□□ -1.51
VTI1B-206ENST00000556461 PRNTQ86SH4 94 aa5.61□□□□□ -1.51
VTI1B-206ENST00000556461 TMEM75Q8N9X5 138 aa5.61□□□□□ -1.51
VTI1B-206ENST00000556461 TRGV11A0A075B6L2 103 aa5.6□□□□□ -1.51
VTI1B-206ENST00000556461 TRAV21A0A0B4J279 112 aa5.6□□□□□ -1.51
VTI1B-206ENST00000556461 A0A1W2PRE2 83 aa5.6□□□□□ -1.51
VTI1B-206ENST00000556461 MAP1LC3B2A6NCE7 125 aa5.6□□□□□ -1.51
VTI1B-206ENST00000556461 FAM74A7A6NL05 159 aa5.6□□□□□ -1.51
VTI1B-206ENST00000556461 FAM3BP58499 235 aaPredicted RBP5.6□□□□□ -1.51
VTI1B-206ENST00000556461 FLI1Q01543 452 aaPredicted RBP5.6□□□□□ -1.51
VTI1B-206ENST00000556461 ZNF345Q14585 488 aa5.6□□□□□ -1.51
VTI1B-206ENST00000556461 CYB561D1Q8N8Q1 229 aa5.6□□□□□ -1.51
VTI1B-206ENST00000556461 ZNF479Q96JC4 524 aa5.6□□□□□ -1.51
VTI1B-206ENST00000556461 KRTAP1-5Q9BYS1 174 aa5.6□□□□□ -1.51
VTI1B-206ENST00000556461 MAP1LC3BQ9GZQ8 125 aa5.6□□□□□ -1.51
VTI1B-206ENST00000556461 HSPG2P98160 4391 aa5.59□□□□□ -1.51
VTI1B-206ENST00000556461 NBDYA0A0U1RRE5 68 aa5.59□□□□□ -1.51
VTI1B-206ENST00000556461 SERTM2A0A1B0GWG4 89 aa5.59□□□□□ -1.51
VTI1B-206ENST00000556461 PRSS29PA6NIE9 313 aa5.59□□□□□ -1.51
VTI1B-206ENST00000556461 HMSDA8MTL9 139 aa5.59□□□□□ -1.51
VTI1B-206ENST00000556461 H3BNG1 76 aa5.59□□□□□ -1.51
VTI1B-206ENST00000556461 PEX7O00628 323 aa5.59□□□□□ -1.51
VTI1B-206ENST00000556461 PAX4O43316 350 aa5.59□□□□□ -1.51
VTI1B-206ENST00000556461 GCGP01275 180 aa5.59□□□□□ -1.51
VTI1B-206ENST00000556461 CRYBA4P53673 196 aa5.59□□□□□ -1.51
VTI1B-206ENST00000556461 LINC00336Q6ZUF6 198 aa5.59□□□□□ -1.51
VTI1B-206ENST00000556461 RASL10AQ92737 203 aa5.59□□□□□ -1.51
VTI1B-206ENST00000556461 ARL2-SNX15V9GYD0 113 aa5.59□□□□□ -1.51
VTI1B-206ENST00000556461 APOBP04114 4563 aaKnown RBP5.58□□□□□ -1.52
VTI1B-206ENST00000556461 A0A1B0GV50 99 aa5.58□□□□□ -1.52
VTI1B-206ENST00000556461 BCL2L11O43521 198 aa5.58□□□□□ -1.52
VTI1B-206ENST00000556461 IFNA7P01567 189 aa5.58□□□□□ -1.52
VTI1B-206ENST00000556461 SMUG1Q53HV7 270 aa5.58□□□□□ -1.52
VTI1B-206ENST00000556461 C1orf134Q5TEV5 83 aa5.58□□□□□ -1.52
VTI1B-206ENST00000556461 DPPA3Q6W0C5 159 aa5.58□□□□□ -1.52
VTI1B-206ENST00000556461 TMUB2Q71RG4 321 aa5.58□□□□□ -1.52
VTI1B-206ENST00000556461 Q86TA4 180 aa5.58□□□□□ -1.52
VTI1B-206ENST00000556461 SPXQ9BT56 116 aa5.58□□□□□ -1.52
VTI1B-206ENST00000556461 NDFIP1Q9BT67 221 aa5.58□□□□□ -1.52
VTI1B-206ENST00000556461 ZNF471Q9BX82 626 aaPredicted RBP5.58□□□□□ -1.52
VTI1B-206ENST00000556461 Q9H8V8 135 aa5.58□□□□□ -1.52
VTI1B-206ENST00000556461 SDF2L1Q9HCN8 221 aa5.58□□□□□ -1.52
VTI1B-206ENST00000556461 HHLA3Q9XRX5 114 aa5.58□□□□□ -1.52
VTI1B-206ENST00000556461 MRPS16Q9Y3D3 137 aaKnown RBP5.58□□□□□ -1.52
VTI1B-206ENST00000556461 RYR1P21817 5038 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 TRAV4A0A0B4J268 109 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 IGKV3D-20A0A0C4DH25 116 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 TRGV4A0A0C4DH28 118 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 A0A0D9SG52 128 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 LOC100131303A0A0U1RQF7 123 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 KANTRA0A1W2PQU2 76 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 K7EQM0 130 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 M0R2P5 195 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 PFN1P07737 140 aaKnown RBP5.57□□□□□ -1.52
VTI1B-206ENST00000556461 SEC11BP0C7V7 166 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 RNASE3P12724 160 aaKnown RBP5.57□□□□□ -1.52
VTI1B-206ENST00000556461 CRIP1P50238 77 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 TNP2Q05952 138 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 FAM213BQ8TBF2 198 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 MBD3L1Q8WWY6 194 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 ZC2HC1AQ96GY0 325 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 C9orf85Q96MD7 179 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 UPK3BQ9BT76 320 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 PRO0255Q9UI72 69 aa5.57□□□□□ -1.52
VTI1B-206ENST00000556461 C9JCJ5 164 aa5.56□□□□□ -1.52
VTI1B-206ENST00000556461 K7EQD1 137 aa5.56□□□□□ -1.52
VTI1B-206ENST00000556461 PAGE4O60829 102 aa5.56□□□□□ -1.52
VTI1B-206ENST00000556461 LGALSLQ3ZCW2 172 aaPredicted RBP5.56□□□□□ -1.52
VTI1B-206ENST00000556461 SAPCD1Q5SSQ6 148 aa5.56□□□□□ -1.52
VTI1B-206ENST00000556461 CST9LP1Q5W188 147 aa5.56□□□□□ -1.52
VTI1B-206ENST00000556461 LYPD5Q6UWN5 251 aa5.56□□□□□ -1.52
VTI1B-206ENST00000556461 Q6ZNX1 250 aa5.56□□□□□ -1.52
VTI1B-206ENST00000556461 ZNF575Q86XF7 245 aa5.56□□□□□ -1.52
VTI1B-206ENST00000556461 C6orf223Q8N319 242 aa5.56□□□□□ -1.52
VTI1B-206ENST00000556461 OR4C5Q8NGB2 326 aa5.56□□□□□ -1.52
VTI1B-206ENST00000556461 SFT2D1Q8WV19 159 aa5.56□□□□□ -1.52
VTI1B-206ENST00000556461 HIST1H2BAQ96A08 127 aa5.56□□□□□ -1.52
VTI1B-206ENST00000556461 KCNS1Q96KK3 526 aa5.56□□□□□ -1.52
VTI1B-206ENST00000556461 ICOSQ9Y6W8 199 aa5.56□□□□□ -1.52
VTI1B-206ENST00000556461 IGHV3-73A0A0B4J1V6 119 aa5.55□□□□□ -1.52
VTI1B-206ENST00000556461 PGPEP1LA6NFU8 196 aa5.55□□□□□ -1.52
VTI1B-206ENST00000556461 FBLL1A6NHQ2 334 aaKnown RBP5.55□□□□□ -1.52
VTI1B-206ENST00000556461 RS1O15537 224 aa5.55□□□□□ -1.52
VTI1B-206ENST00000556461 SH2D1AO60880 128 aa5.55□□□□□ -1.52
VTI1B-206ENST00000556461 PFDN1O60925 122 aa5.55□□□□□ -1.52
VTI1B-206ENST00000556461 NXPH4O95158 308 aa5.55□□□□□ -1.52
VTI1B-206ENST00000556461 GYPEP15421 78 aa5.55□□□□□ -1.52
VTI1B-206ENST00000556461 CCL20P78556 96 aa5.55□□□□□ -1.52
VTI1B-206ENST00000556461 ZNF876PQ49A33 203 aa5.55□□□□□ -1.52
VTI1B-206ENST00000556461 ZFP69Q49AA0 526 aa5.55□□□□□ -1.52
VTI1B-206ENST00000556461 ZNF506Q5JVG8 444 aa5.55□□□□□ -1.52
VTI1B-206ENST00000556461 CFAP126Q5VTH2 177 aa5.55□□□□□ -1.52
VTI1B-206ENST00000556461 STOML3Q8TAV4 291 aa5.55□□□□□ -1.52
VTI1B-206ENST00000556461 NKX6-2Q9C056 277 aaPredicted RBP5.55□□□□□ -1.52
VTI1B-206ENST00000556461 TRBV6-1A0A0K0K1D8 114 aa5.54□□□□□ -1.52
VTI1B-206ENST00000556461 SCO2A0A1W2PP80 73 aa5.54□□□□□ -1.52
VTI1B-206ENST00000556461 GRIFINA4D1Z8 144 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms