RNA–Protein interactions for RNA: ENST00000556247.1

LRP1-210, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 611 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-210ENST00000556247 FOXA3P55318 350 aaPredicted RBP12.6□□□□□ -0.39
LRP1-210ENST00000556247 ANXA2RQ3ZCQ2 193 aa12.6□□□□□ -0.39
LRP1-210ENST00000556247 MUC21Q5SSG8 566 aa12.6□□□□□ -0.39
LRP1-210ENST00000556247 FAM159AQ6UWV7 190 aa12.6□□□□□ -0.39
LRP1-210ENST00000556247 KCNS1Q96KK3 526 aa12.6□□□□□ -0.39
LRP1-210ENST00000556247 CRXO43186 299 aaPredicted RBP12.59□□□□□ -0.39
LRP1-210ENST00000556247 RPL35AP18077 110 aaKnown RBP12.59□□□□□ -0.39
LRP1-210ENST00000556247 FER1L6-AS1Q8NA97 138 aa12.59□□□□□ -0.39
LRP1-210ENST00000556247 TPPP3Q9BW30 176 aa12.59□□□□□ -0.39
LRP1-210ENST00000556247 INSP01308 110 aa12.58□□□□□ -0.4
LRP1-210ENST00000556247 RPS10P46783 165 aaKnown RBP12.58□□□□□ -0.4
LRP1-210ENST00000556247 RIPPLY3P57055 190 aa12.58□□□□□ -0.4
LRP1-210ENST00000556247 MORN3Q6PF18 240 aaPredicted RBP12.58□□□□□ -0.4
LRP1-210ENST00000556247 BORCS7Q96B45 105 aa12.58□□□□□ -0.4
LRP1-210ENST00000556247 SRD5A3Q9H8P0 318 aa12.58□□□□□ -0.4
LRP1-210ENST00000556247 XCL2Q9UBD3 114 aa12.58□□□□□ -0.4
LRP1-210ENST00000556247 IGHV1OR15-1A0A075B7D0 117 aa12.57□□□□□ -0.4
LRP1-210ENST00000556247 TYMSP04818 313 aa12.57□□□□□ -0.4
LRP1-210ENST00000556247 MRPL54Q6P161 138 aaKnown RBP12.57□□□□□ -0.4
LRP1-210ENST00000556247 LYZL1Q6UWQ5 148 aa12.57□□□□□ -0.4
LRP1-210ENST00000556247 Q8N1Y9 231 aa12.57□□□□□ -0.4
LRP1-210ENST00000556247 C20orf144Q9BQM9 153 aa12.57□□□□□ -0.4
LRP1-210ENST00000556247 NOTCH3Q9UM47 2321 aa12.57□□□□□ -0.4
LRP1-210ENST00000556247 COL6A5A8TX70 2615 aa12.57□□□□□ -0.4
LRP1-210ENST00000556247 STAB1Q9NY15 2570 aa12.56□□□□□ -0.4
LRP1-210ENST00000556247 IGLC6P0CF74 106 aa12.56□□□□□ -0.4
LRP1-210ENST00000556247 S100A4P26447 101 aaKnown RBP12.56□□□□□ -0.4
LRP1-210ENST00000556247 ASIPP42127 132 aa12.56□□□□□ -0.4
LRP1-210ENST00000556247 ZNF575Q86XF7 245 aa12.56□□□□□ -0.4
LRP1-210ENST00000556247 A0A1B0GUT8 65 aa12.55□□□□□ -0.4
LRP1-210ENST00000556247 F2Z2F3 143 aa12.55□□□□□ -0.4
LRP1-210ENST00000556247 GNRH2O43555 120 aa12.55□□□□□ -0.4
LRP1-210ENST00000556247 RIGQ13278 110 aa12.55□□□□□ -0.4
LRP1-210ENST00000556247 COX19Q49B96 90 aa12.55□□□□□ -0.4
LRP1-210ENST00000556247 ATP5L2Q7Z4Y8 100 aa12.55□□□□□ -0.4
LRP1-210ENST00000556247 LINC01587Q99440 93 aa12.55□□□□□ -0.4
LRP1-210ENST00000556247 C1QTNF4Q9BXJ3 329 aa12.55□□□□□ -0.4
LRP1-210ENST00000556247 RBMY1A1P0DJD3 496 aaKnown RBP12.54□□□□□ -0.4
LRP1-210ENST00000556247 RBMY1CP0DJD4 496 aa12.54□□□□□ -0.4
LRP1-210ENST00000556247 EGFEM1PQ0D2K5 195 aa12.54□□□□□ -0.4
LRP1-210ENST00000556247 RBMY1FQ15415 496 aaKnown RBP12.54□□□□□ -0.4
LRP1-210ENST00000556247 TDRG1Q3Y452 100 aa12.54□□□□□ -0.4
LRP1-210ENST00000556247 TMEM208Q9BTX3 173 aa12.54□□□□□ -0.4
LRP1-210ENST00000556247 CBY3A6NI87 242 aa12.53□□□□□ -0.4
LRP1-210ENST00000556247 ARMS2P0C7Q2 107 aa12.53□□□□□ -0.4
LRP1-210ENST00000556247 CTRLP40313 264 aa12.53□□□□□ -0.4
LRP1-210ENST00000556247 KRTAP10-11P60412 298 aa12.53□□□□□ -0.4
LRP1-210ENST00000556247 RAB4BP61018 213 aa12.53□□□□□ -0.4
LRP1-210ENST00000556247 DNLZQ5SXM8 178 aa12.53□□□□□ -0.4
LRP1-210ENST00000556247 WDR73Q6P4I2 378 aa12.53□□□□□ -0.4
LRP1-210ENST00000556247 RASL11AQ6T310 242 aa12.53□□□□□ -0.4
LRP1-210ENST00000556247 CSTL1Q9H114 145 aa12.53□□□□□ -0.4
LRP1-210ENST00000556247 TIMM8BQ9Y5J9 83 aaPredicted RBP12.53□□□□□ -0.4
LRP1-210ENST00000556247 TRGV11A0A075B6L2 103 aa12.52□□□□□ -0.41
LRP1-210ENST00000556247 LOC102724200A0A096LPH7 203 aaPredicted RBP12.52□□□□□ -0.41
LRP1-210ENST00000556247 MUC21A0A0G2JKD1 596 aa12.52□□□□□ -0.41
LRP1-210ENST00000556247 MUC21A0A140T8X8 626 aa12.52□□□□□ -0.41
LRP1-210ENST00000556247 A0A1B0GW15 77 aa12.52□□□□□ -0.41
LRP1-210ENST00000556247 G3V4G9 280 aa12.52□□□□□ -0.41
LRP1-210ENST00000556247 H3BVH4 76 aa12.52□□□□□ -0.41
LRP1-210ENST00000556247 S100A8P05109 93 aa12.52□□□□□ -0.41
LRP1-210ENST00000556247 OR5AL1P0C617 328 aa12.52□□□□□ -0.41
LRP1-210ENST00000556247 MED14OSP0DP75 135 aa12.52□□□□□ -0.41
LRP1-210ENST00000556247 CAMPP49913 170 aa12.52□□□□□ -0.41
LRP1-210ENST00000556247 SSTP61278 116 aa12.52□□□□□ -0.41
LRP1-210ENST00000556247 HBBP68871 147 aa12.52□□□□□ -0.41
LRP1-210ENST00000556247 TMEM256Q8N2U0 113 aa12.52□□□□□ -0.41
LRP1-210ENST00000556247 GOLT1BQ9Y3E0 138 aa12.52□□□□□ -0.41
LRP1-210ENST00000556247 VWFP04275 2813 aa12.52□□□□□ -0.41
LRP1-210ENST00000556247 A0A1B0GXF2 115 aa12.51□□□□□ -0.41
LRP1-210ENST00000556247 SNAI2O43623 268 aa12.51□□□□□ -0.41
LRP1-210ENST00000556247 GIG44P09565 113 aaPredicted RBP12.51□□□□□ -0.41
LRP1-210ENST00000556247 FRMD6-AS1P0C7T7 363 aa12.51□□□□□ -0.41
LRP1-210ENST00000556247 HTN1P15515 57 aa12.51□□□□□ -0.41
LRP1-210ENST00000556247 CACNG7P62955 275 aa12.51□□□□□ -0.41
LRP1-210ENST00000556247 C1orf158Q8N1D5 194 aa12.51□□□□□ -0.41
LRP1-210ENST00000556247 LINC00467Q9BRT7 94 aa12.51□□□□□ -0.41
LRP1-210ENST00000556247 SSBP4Q9BWG4 385 aaPredicted RBP12.51□□□□□ -0.41
LRP1-210ENST00000556247 GNB1LQ9BYB4 327 aa12.51□□□□□ -0.41
LRP1-210ENST00000556247 TP53TG3Q9ULZ0 132 aa12.51□□□□□ -0.41
LRP1-210ENST00000556247 TRAPPC1Q9Y5R8 145 aa12.51□□□□□ -0.41
LRP1-210ENST00000556247 IGHV3OR16-12A0A075B7B8 117 aa12.5□□□□□ -0.41
LRP1-210ENST00000556247 C1orf196B1AJZ1 125 aa12.5□□□□□ -0.41
LRP1-210ENST00000556247 SNURFLB1AK76 121 aa12.5□□□□□ -0.41
LRP1-210ENST00000556247 TWIST1Q15672 202 aa12.5□□□□□ -0.41
LRP1-210ENST00000556247 SAMD5Q5TGI4 173 aa12.5□□□□□ -0.41
LRP1-210ENST00000556247 SPANXN1Q5VSR9 72 aa12.5□□□□□ -0.41
LRP1-210ENST00000556247 TMEM136Q6ZRR5 245 aa12.5□□□□□ -0.41
LRP1-210ENST00000556247 IGHV3-16A0A0C4DH30 117 aa12.49□□□□□ -0.41
LRP1-210ENST00000556247 MT-ND6P03923 174 aa12.49□□□□□ -0.41
LRP1-210ENST00000556247 TRGC2P03986 189 aa12.49□□□□□ -0.41
LRP1-210ENST00000556247 NTF3P20783 257 aa12.49□□□□□ -0.41
LRP1-210ENST00000556247 APOC4P55056 127 aa12.49□□□□□ -0.41
LRP1-210ENST00000556247 FRZBQ92765 325 aa12.49□□□□□ -0.41
LRP1-210ENST00000556247 PHLDA3Q9Y5J5 127 aa12.49□□□□□ -0.41
LRP1-210ENST00000556247 KIR2DL5BA0A0G2JN68 375 aa12.48□□□□□ -0.41
LRP1-210ENST00000556247 KIR2DL5BA0A0G2JPC4 375 aa12.48□□□□□ -0.41
LRP1-210ENST00000556247 HLA-DQA1P01909 254 aa12.48□□□□□ -0.41
LRP1-210ENST00000556247 RNASE3P12724 160 aaKnown RBP12.48□□□□□ -0.41
LRP1-210ENST00000556247 FABP9Q0Z7S8 132 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms