RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 A0A087WTM6 91 aa13.37□□□□□ -0.27
PRKCH-219ENST00000555906 A0A1W2PPV4 95 aa13.37□□□□□ -0.27
PRKCH-219ENST00000555906 F6UZH7 168 aa13.37□□□□□ -0.27
PRKCH-219ENST00000555906 TYMSP04818 313 aa13.37□□□□□ -0.27
PRKCH-219ENST00000555906 EVI2AP22794 236 aa13.37□□□□□ -0.27
PRKCH-219ENST00000555906 RAB2AP61019 212 aa13.37□□□□□ -0.27
PRKCH-219ENST00000555906 OR4C5Q8NGB2 326 aa13.37□□□□□ -0.27
PRKCH-219ENST00000555906 SDF2L1Q9HCN8 221 aa13.37□□□□□ -0.27
PRKCH-219ENST00000555906 FAT1Q14517 4588 aa13.37□□□□□ -0.27
PRKCH-219ENST00000555906 TRAV8-1A0A0A6YYK1 113 aa13.36□□□□□ -0.27
PRKCH-219ENST00000555906 SH2D6Q7Z4S9 175 aa13.36□□□□□ -0.27
PRKCH-219ENST00000555906 C10orf126Q8N4M7 172 aa13.36□□□□□ -0.27
PRKCH-219ENST00000555906 TVP23CQ96ET8 276 aa13.36□□□□□ -0.27
PRKCH-219ENST00000555906 KCNS1Q96KK3 526 aa13.36□□□□□ -0.27
PRKCH-219ENST00000555906 TREM1Q9NP99 234 aa13.36□□□□□ -0.27
PRKCH-219ENST00000555906 SERTM2A0A1B0GWG4 89 aa13.35□□□□□ -0.27
PRKCH-219ENST00000555906 A6NHS1 94 aa13.35□□□□□ -0.27
PRKCH-219ENST00000555906 GNRH2O43555 120 aa13.35□□□□□ -0.27
PRKCH-219ENST00000555906 FUSP35637 526 aaKnown RBP eCLIP13.35□□□□□ -0.27
PRKCH-219ENST00000555906 TIRAPP58753 221 aa13.35□□□□□ -0.27
PRKCH-219ENST00000555906 GATA1P15976 413 aaPredicted RBP13.34□□□□□ -0.27
PRKCH-219ENST00000555906 GNG5P63218 68 aa13.34□□□□□ -0.27
PRKCH-219ENST00000555906 OR10G9Q8NGN4 311 aa13.34□□□□□ -0.27
PRKCH-219ENST00000555906 OR10G7Q8NGN6 311 aa13.34□□□□□ -0.27
PRKCH-219ENST00000555906 NDFIP1Q9BT67 221 aa13.34□□□□□ -0.27
PRKCH-219ENST00000555906 LOC100131303A0A0U1RQF7 123 aa13.33□□□□□ -0.28
PRKCH-219ENST00000555906 CRYGDP07320 174 aa13.33□□□□□ -0.28
PRKCH-219ENST00000555906 ARL14EPLP0DKL9 152 aa13.33□□□□□ -0.28
PRKCH-219ENST00000555906 CDC34P49427 236 aaPredicted RBP13.33□□□□□ -0.28
PRKCH-219ENST00000555906 OR2G3Q8NGZ4 309 aa13.33□□□□□ -0.28
PRKCH-219ENST00000555906 ASB13Q8WXK3 278 aa13.33□□□□□ -0.28
PRKCH-219ENST00000555906 EPM2AB3EWF7 344 aa13.32□□□□□ -0.28
PRKCH-219ENST00000555906 HMGB3O15347 200 aaKnown RBP13.32□□□□□ -0.28
PRKCH-219ENST00000555906 C5orf17Q8NAS9 161 aa13.32□□□□□ -0.28
PRKCH-219ENST00000555906 VPS13BQ7Z7G8 4022 aa13.31□□□□□ -0.28
PRKCH-219ENST00000555906 FBLL1A6NHQ2 334 aaKnown RBP13.31□□□□□ -0.28
PRKCH-219ENST00000555906 STAG3L2P0CL84 134 aa13.31□□□□□ -0.28
PRKCH-219ENST00000555906 STAG3L3P0CL85 134 aa13.31□□□□□ -0.28
PRKCH-219ENST00000555906 PPT1P50897 306 aa13.31□□□□□ -0.28
PRKCH-219ENST00000555906 NHLRC2Q8NBF2 726 aa13.31□□□□□ -0.28
PRKCH-219ENST00000555906 XGP55808 180 aa13.3□□□□□ -0.28
PRKCH-219ENST00000555906 SUN5Q8TC36 379 aa13.3□□□□□ -0.28
PRKCH-219ENST00000555906 PSMG3Q9BT73 122 aaPredicted RBP13.3□□□□□ -0.28
PRKCH-219ENST00000555906 IGHV3-38A0A0C4DH36 116 aa13.29□□□□□ -0.28
PRKCH-219ENST00000555906 K7EQM0 130 aa13.29□□□□□ -0.28
PRKCH-219ENST00000555906 CIDEAO60543 219 aa13.29□□□□□ -0.28
PRKCH-219ENST00000555906 TCRAP04437 139 aa13.29□□□□□ -0.28
PRKCH-219ENST00000555906 KRTAP10-1P60331 282 aa13.29□□□□□ -0.28
PRKCH-219ENST00000555906 LINC01556Q5JQF7 62 aa13.29□□□□□ -0.28
PRKCH-219ENST00000555906 BOLA1Q9Y3E2 137 aa13.29□□□□□ -0.28
PRKCH-219ENST00000555906 GCHFRP30047 84 aa13.28□□□□□ -0.28
PRKCH-219ENST00000555906 RHOHQ15669 191 aa13.28□□□□□ -0.28
PRKCH-219ENST00000555906 ZNF876PQ49A33 203 aa13.28□□□□□ -0.28
PRKCH-219ENST00000555906 SLC25A29Q8N8R3 303 aa13.28□□□□□ -0.28
PRKCH-219ENST00000555906 HSD17B11Q8NBQ5 300 aa13.28□□□□□ -0.28
PRKCH-219ENST00000555906 RAB24Q969Q5 203 aa13.28□□□□□ -0.28
PRKCH-219ENST00000555906 SGK494Q96LW2 274 aa13.28□□□□□ -0.28
PRKCH-219ENST00000555906 C9orf85Q96MD7 179 aa13.28□□□□□ -0.28
PRKCH-219ENST00000555906 HERC1Q15751 4861 aa13.27□□□□□ -0.28
PRKCH-219ENST00000555906 TRBV6-4A0A1B0GX49 114 aa13.27□□□□□ -0.29
PRKCH-219ENST00000555906 TAAR5O14804 337 aa13.27□□□□□ -0.29
PRKCH-219ENST00000555906 RS1O15537 224 aa13.27□□□□□ -0.29
PRKCH-219ENST00000555906 PFN1P07737 140 aaKnown RBP13.27□□□□□ -0.29
PRKCH-219ENST00000555906 ZNF80P51504 273 aaPredicted RBP13.27□□□□□ -0.29
PRKCH-219ENST00000555906 ZFP69Q49AA0 526 aa13.27□□□□□ -0.29
PRKCH-219ENST00000555906 CFAP126Q5VTH2 177 aa13.27□□□□□ -0.29
PRKCH-219ENST00000555906 AQP10Q96PS8 301 aa13.27□□□□□ -0.29
PRKCH-219ENST00000555906 PRADC1Q9BSG0 188 aa13.27□□□□□ -0.29
PRKCH-219ENST00000555906 C11orf21Q9P2W6 132 aa13.27□□□□□ -0.29
PRKCH-219ENST00000555906 PSG8Q9UQ74 426 aa13.27□□□□□ -0.29
PRKCH-219ENST00000555906 ALG5Q9Y673 324 aa13.27□□□□□ -0.29
PRKCH-219ENST00000555906 GGTLC3B5MD39 225 aa13.26□□□□□ -0.29
PRKCH-219ENST00000555906 GCGP01275 180 aa13.26□□□□□ -0.29
PRKCH-219ENST00000555906 MBP02144 154 aa13.26□□□□□ -0.29
PRKCH-219ENST00000555906 ATP6V0CP27449 155 aa13.26□□□□□ -0.29
PRKCH-219ENST00000555906 TMEM75Q8N9X5 138 aa13.26□□□□□ -0.29
PRKCH-219ENST00000555906 PTH2Q96A98 100 aa13.26□□□□□ -0.29
PRKCH-219ENST00000555906 TMEM167BQ9NRX6 74 aa13.26□□□□□ -0.29
PRKCH-219ENST00000555906 DMBT1Q9UGM3 2413 aaPredicted RBP13.25□□□□□ -0.29
PRKCH-219ENST00000555906 TRAV8-6A0A0B4J262 113 aa13.25□□□□□ -0.29
PRKCH-219ENST00000555906 IGLV2-11P01706 119 aa13.25□□□□□ -0.29
PRKCH-219ENST00000555906 GCSHP23434 173 aa13.25□□□□□ -0.29
PRKCH-219ENST00000555906 SERF2P84101 59 aa13.25□□□□□ -0.29
PRKCH-219ENST00000555906 FLI1Q01543 452 aaPredicted RBP13.25□□□□□ -0.29
PRKCH-219ENST00000555906 Q5VSD8 79 aa13.25□□□□□ -0.29
PRKCH-219ENST00000555906 DPPA3Q6W0C5 159 aa13.25□□□□□ -0.29
PRKCH-219ENST00000555906 CYB561D1Q8N8Q1 229 aa13.25□□□□□ -0.29
PRKCH-219ENST00000555906 IBA57-AS1B1ANH7 110 aa13.24□□□□□ -0.29
PRKCH-219ENST00000555906 PSCAO43653 123 aa13.24□□□□□ -0.29
PRKCH-219ENST00000555906 SMUG1Q53HV7 270 aa13.24□□□□□ -0.29
PRKCH-219ENST00000555906 ZNF506Q5JVG8 444 aa13.24□□□□□ -0.29
PRKCH-219ENST00000555906 NTN5Q8WTR8 489 aaPredicted RBP13.24□□□□□ -0.29
PRKCH-219ENST00000555906 DNAH8Q96JB1 4490 aa13.23□□□□□ -0.29
PRKCH-219ENST00000555906 LRCOL1A6NCL2 159 aa13.23□□□□□ -0.29
PRKCH-219ENST00000555906 CXorf1O96002 111 aa13.23□□□□□ -0.29
PRKCH-219ENST00000555906 MGST1P10620 155 aaKnown RBP13.23□□□□□ -0.29
PRKCH-219ENST00000555906 OR10J3Q5JRS4 329 aa13.23□□□□□ -0.29
PRKCH-219ENST00000555906 LELP1Q5T871 98 aa13.23□□□□□ -0.29
PRKCH-219ENST00000555906 FRZBQ92765 325 aa13.23□□□□□ -0.29
PRKCH-219ENST00000555906 EPDR1Q9UM22 224 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms