RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 OR4X2Q8NGF9 303 aa5.27□□□□□ -1.57
LINC-ROR-201ENST00000553704 C16orf92Q96LL3 132 aa5.27□□□□□ -1.57
LINC-ROR-201ENST00000553704 MAP1AP78559 2803 aaPredicted RBP5.27□□□□□ -1.57
LINC-ROR-201ENST00000553704 GAGE10A6NGK3 116 aa5.27□□□□□ -1.57
LINC-ROR-201ENST00000553704 K7EP34 96 aa5.27□□□□□ -1.57
LINC-ROR-201ENST00000553704 SIVA1O15304 175 aa5.27□□□□□ -1.57
LINC-ROR-201ENST00000553704 S100A7P31151 101 aa5.27□□□□□ -1.57
LINC-ROR-201ENST00000553704 SPANXN1Q5VSR9 72 aa5.27□□□□□ -1.57
LINC-ROR-201ENST00000553704 LCNL1Q6ZST4 164 aa5.27□□□□□ -1.57
LINC-ROR-201ENST00000553704 MRPL53Q96EL3 112 aaKnown RBP5.27□□□□□ -1.57
LINC-ROR-201ENST00000553704 CHAC1Q9BUX1 264 aa5.27□□□□□ -1.57
LINC-ROR-201ENST00000553704 SPTAN1Q13813 2472 aaKnown RBP5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 TRAV40A0A0B4J280 105 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 F6UB75 175 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 IGHV3-11P01762 117 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 IGHV4-39P01824 125 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 EDN2P20800 178 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 GCSHP23434 173 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 ARL3P36405 182 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 UCNP55089 124 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 ZFAND2AQ8N6M9 145 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 MAPKAPK5-AS1Q8N8E1 139 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 TMEM160Q9NX00 188 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 MOB4Q9Y3A3 225 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 CSMD2Q7Z408 3487 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 TRBV25-1A0A075B6N4 114 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 IGHV4-4A0A075B6R2 117 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 M0R381 172 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 SOCS3O14543 225 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 DPM2O94777 84 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 LAGE3Q14657 143 aa5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 RPL39LQ96EH5 51 aaKnown RBP5.26□□□□□ -1.57
LINC-ROR-201ENST00000553704 CRYBG3Q68DQ2 2970 aa5.25□□□□□ -1.57
LINC-ROR-201ENST00000553704 IGKV3-7A0A075B6H7 116 aa5.25□□□□□ -1.57
LINC-ROR-201ENST00000553704 A0A1W2PPM0 123 aa5.25□□□□□ -1.57
LINC-ROR-201ENST00000553704 RNF223E7ERA6 249 aa5.25□□□□□ -1.57
LINC-ROR-201ENST00000553704 IGHV4-38-2P0DP08 117 aa5.25□□□□□ -1.57
LINC-ROR-201ENST00000553704 LY6EQ16553 131 aa5.25□□□□□ -1.57
LINC-ROR-201ENST00000553704 Q6ZS46 218 aa5.25□□□□□ -1.57
LINC-ROR-201ENST00000553704 C9orf139Q6ZV77 190 aa5.25□□□□□ -1.57
LINC-ROR-201ENST00000553704 AP1S3Q96PC3 154 aa5.25□□□□□ -1.57
LINC-ROR-201ENST00000553704 KLK15Q9H2R5 256 aa5.25□□□□□ -1.57
LINC-ROR-201ENST00000553704 MUC4Q99102 2169 aa5.25□□□□□ -1.57
LINC-ROR-201ENST00000553704 IGHV4-61A0A0C4DH41 118 aa5.25□□□□□ -1.57
LINC-ROR-201ENST00000553704 ATP5LO75964 103 aa5.25□□□□□ -1.57
LINC-ROR-201ENST00000553704 RASL10AQ92737 203 aa5.25□□□□□ -1.57
LINC-ROR-201ENST00000553704 VPS25Q9BRG1 176 aa5.25□□□□□ -1.57
LINC-ROR-201ENST00000553704 SMIM2Q9BVW6 85 aa5.25□□□□□ -1.57
LINC-ROR-201ENST00000553704 HIF1ANQ9NWT6 349 aa5.25□□□□□ -1.57
LINC-ROR-201ENST00000553704 IGHV1-69DA0A0B4J2H0 117 aa5.24□□□□□ -1.57
LINC-ROR-201ENST00000553704 FAM223BA6NKX1 122 aa5.24□□□□□ -1.57
LINC-ROR-201ENST00000553704 IGHV1-69P01742 117 aa5.24□□□□□ -1.57
LINC-ROR-201ENST00000553704 SMIM15Q7Z3B0 74 aa5.24□□□□□ -1.57
LINC-ROR-201ENST00000553704 FAM223AQ8IWN6 122 aa5.24□□□□□ -1.57
LINC-ROR-201ENST00000553704 PHLDA1Q8WV24 401 aaPredicted RBP5.24□□□□□ -1.57
LINC-ROR-201ENST00000553704 COL25A1Q9BXS0 654 aaPredicted RBP5.24□□□□□ -1.57
LINC-ROR-201ENST00000553704 HIGD1BQ9P298 99 aa5.24□□□□□ -1.57
LINC-ROR-201ENST00000553704 SPCS1Q9Y6A9 102 aa5.24□□□□□ -1.57
LINC-ROR-201ENST00000553704 AGRNO00468 2067 aa5.24□□□□□ -1.57
LINC-ROR-201ENST00000553704 A0A087WX48 190 aa5.24□□□□□ -1.57
LINC-ROR-201ENST00000553704 CRIP2P52943 208 aaPredicted RBP5.24□□□□□ -1.57
LINC-ROR-201ENST00000553704 ANXA2RQ3ZCQ2 193 aa5.24□□□□□ -1.57
LINC-ROR-201ENST00000553704 GTF2H5Q6ZYL4 71 aa5.24□□□□□ -1.57
LINC-ROR-201ENST00000553704 C14orf178Q8N769 122 aaPredicted RBP5.24□□□□□ -1.57
LINC-ROR-201ENST00000553704 MEGF9Q9H1U4 602 aa5.24□□□□□ -1.57
LINC-ROR-201ENST00000553704 NHP2Q9NX24 153 aaKnown RBP5.24□□□□□ -1.57
LINC-ROR-201ENST00000553704 UTP20O75691 2785 aaKnown RBP5.23□□□□□ -1.57
LINC-ROR-201ENST00000553704 SRD5A1P18405 259 aa5.23□□□□□ -1.57
LINC-ROR-201ENST00000553704 NEGR1Q7Z3B1 354 aa5.23□□□□□ -1.57
LINC-ROR-201ENST00000553704 DEFB104AQ8WTQ1 72 aa5.23□□□□□ -1.57
LINC-ROR-201ENST00000553704 CFAP46Q8IYW2 2715 aa5.23□□□□□ -1.57
LINC-ROR-201ENST00000553704 H3BUX3 64 aa5.23□□□□□ -1.57
LINC-ROR-201ENST00000553704 GNRH2O43555 120 aa5.23□□□□□ -1.57
LINC-ROR-201ENST00000553704 MGPP08493 103 aa5.23□□□□□ -1.57
LINC-ROR-201ENST00000553704 GNLYP22749 145 aa5.23□□□□□ -1.57
LINC-ROR-201ENST00000553704 RNASE4P34096 147 aaKnown RBP5.23□□□□□ -1.57
LINC-ROR-201ENST00000553704 BLCAPP62952 87 aa5.23□□□□□ -1.57
LINC-ROR-201ENST00000553704 MYOZ3Q8TDC0 251 aa5.23□□□□□ -1.57
LINC-ROR-201ENST00000553704 MRAP2Q96G30 205 aa5.23□□□□□ -1.57
LINC-ROR-201ENST00000553704 FAM19A4Q96LR4 140 aa5.23□□□□□ -1.57
LINC-ROR-201ENST00000553704 SMPXQ9UHP9 88 aa5.23□□□□□ -1.57
LINC-ROR-201ENST00000553704 NDUFA4O00483 81 aa5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 SMIM13P0DJ93 91 aa5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 RNASE3P12724 160 aaKnown RBP5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 RIPPLY3P57055 190 aa5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 SUMO2P61956 95 aaKnown RBP5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 RPL11P62913 178 aaKnown RBP5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 SRSF1Q07955 248 aaKnown RBP eCLIP5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 SAMD5Q5TGI4 173 aa5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 CEND1Q8N111 149 aa5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 OR10J6PQ8NGY7 276 aa5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 TRAV21A0A0B4J279 112 aa5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 F8VRH5 84 aa5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 K7ERU9 68 aa5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 HLA-DRB4P13762 266 aa5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 S100A4P26447 101 aaKnown RBP5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 ASIPP42127 132 aa5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 WFDC12Q8WWY7 111 aa5.22□□□□□ -1.57
LINC-ROR-201ENST00000553704 DPH3P1Q9H4G8 78 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms