RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 GGTLC3B5MD39 225 aa9.12□□□□□ -0.95
HNRNPC-205ENST00000553300 FLI1Q01543 452 aaPredicted RBP9.12□□□□□ -0.95
HNRNPC-205ENST00000553300 ZNF345Q14585 488 aa9.12□□□□□ -0.95
HNRNPC-205ENST00000553300 TTC32Q5I0X7 151 aa9.12□□□□□ -0.95
HNRNPC-205ENST00000553300 PSG8Q9UQ74 426 aa9.12□□□□□ -0.95
HNRNPC-205ENST00000553300 MRPS16Q9Y3D3 137 aaKnown RBP9.12□□□□□ -0.95
HNRNPC-205ENST00000553300 ICOSQ9Y6W8 199 aa9.12□□□□□ -0.95
HNRNPC-205ENST00000553300 TRGV4A0A0C4DH28 118 aa9.11□□□□□ -0.95
HNRNPC-205ENST00000553300 IGHV3-16A0A0C4DH30 117 aa9.11□□□□□ -0.95
HNRNPC-205ENST00000553300 A0A1W2PPQ1 181 aa9.11□□□□□ -0.95
HNRNPC-205ENST00000553300 HMSDA8MTL9 139 aa9.11□□□□□ -0.95
HNRNPC-205ENST00000553300 F6UZH7 168 aa9.11□□□□□ -0.95
HNRNPC-205ENST00000553300 M0R2P5 195 aa9.11□□□□□ -0.95
HNRNPC-205ENST00000553300 BTF3P20290 206 aaKnown RBP9.11□□□□□ -0.95
HNRNPC-205ENST00000553300 CRYBA4P53673 196 aa9.11□□□□□ -0.95
HNRNPC-205ENST00000553300 FHL2Q14192 279 aa9.11□□□□□ -0.95
HNRNPC-205ENST00000553300 ZNF726P1Q15940 193 aa9.11□□□□□ -0.95
HNRNPC-205ENST00000553300 MRPL23Q16540 153 aaKnown RBP9.11□□□□□ -0.95
HNRNPC-205ENST00000553300 SMUG1Q53HV7 270 aa9.11□□□□□ -0.95
HNRNPC-205ENST00000553300 C6orf223Q8N319 242 aa9.11□□□□□ -0.95
HNRNPC-205ENST00000553300 CYTL1Q9NRR1 136 aa9.11□□□□□ -0.95
HNRNPC-205ENST00000553300 GNRH2O43555 120 aa9.1□□□□□ -0.95
HNRNPC-205ENST00000553300 GCGP01275 180 aa9.1□□□□□ -0.95
HNRNPC-205ENST00000553300 IFNA7P01567 189 aa9.1□□□□□ -0.95
HNRNPC-205ENST00000553300 IGLV2-11P01706 119 aa9.1□□□□□ -0.95
HNRNPC-205ENST00000553300 IGHV3-53P01767 116 aa9.1□□□□□ -0.95
HNRNPC-205ENST00000553300 TYMSP04818 313 aa9.1□□□□□ -0.95
HNRNPC-205ENST00000553300 PFN1P07737 140 aaKnown RBP9.1□□□□□ -0.95
HNRNPC-205ENST00000553300 PPT1P50897 306 aa9.1□□□□□ -0.95
HNRNPC-205ENST00000553300 KCNRGQ8N5I3 272 aa9.1□□□□□ -0.95
HNRNPC-205ENST00000553300 STOML3Q8TAV4 291 aa9.1□□□□□ -0.95
HNRNPC-205ENST00000553300 HIST1H2BAQ96A08 127 aa9.1□□□□□ -0.95
HNRNPC-205ENST00000553300 SGK494Q96LW2 274 aa9.1□□□□□ -0.95
HNRNPC-205ENST00000553300 TRAV4A0A0B4J268 109 aa9.09□□□□□ -0.95
HNRNPC-205ENST00000553300 A0A0D9SG52 128 aa9.09□□□□□ -0.95
HNRNPC-205ENST00000553300 ORM1P02763 201 aa9.09□□□□□ -0.95
HNRNPC-205ENST00000553300 PRNTQ86SH4 94 aa9.09□□□□□ -0.95
HNRNPC-205ENST00000553300 C8orf49Q96NF6 230 aa9.09□□□□□ -0.95
HNRNPC-205ENST00000553300 TCEAL7Q9BRU2 100 aa9.09□□□□□ -0.95
HNRNPC-205ENST00000553300 PKHD1P08F94 4074 aa9.09□□□□□ -0.95
HNRNPC-205ENST00000553300 PKD1P98161 4303 aa9.08□□□□□ -0.96
HNRNPC-205ENST00000553300 MAP1LC3B2A6NCE7 125 aa9.08□□□□□ -0.96
HNRNPC-205ENST00000553300 FAM74A7A6NL05 159 aa9.08□□□□□ -0.96
HNRNPC-205ENST00000553300 UMAD1C9J7I0 102 aa9.08□□□□□ -0.96
HNRNPC-205ENST00000553300 CIDEAO60543 219 aa9.08□□□□□ -0.96
HNRNPC-205ENST00000553300 SEC11BP0C7V7 166 aa9.08□□□□□ -0.96
HNRNPC-205ENST00000553300 EIF5AP63241 154 aaKnown RBP9.08□□□□□ -0.96
HNRNPC-205ENST00000553300 NEGR1Q7Z3B1 354 aa9.08□□□□□ -0.96
HNRNPC-205ENST00000553300 OR4C5Q8NGB2 326 aa9.08□□□□□ -0.96
HNRNPC-205ENST00000553300 PCNPQ8WW12 178 aaKnown RBP9.08□□□□□ -0.96
HNRNPC-205ENST00000553300 ZNF479Q96JC4 524 aa9.08□□□□□ -0.96
HNRNPC-205ENST00000553300 MAP1LC3BQ9GZQ8 125 aa9.08□□□□□ -0.96
HNRNPC-205ENST00000553300 SFTA3P0C7M3 94 aa9.07□□□□□ -0.96
HNRNPC-205ENST00000553300 FHITP49789 147 aa9.07□□□□□ -0.96
HNRNPC-205ENST00000553300 ZNF80P51504 273 aaPredicted RBP9.07□□□□□ -0.96
HNRNPC-205ENST00000553300 UBE2G2P60604 165 aa9.07□□□□□ -0.96
HNRNPC-205ENST00000553300 ARL2-SNX15V9GYD0 113 aa9.07□□□□□ -0.96
HNRNPC-205ENST00000553300 KANTRA0A1W2PQU2 76 aa9.06□□□□□ -0.96
HNRNPC-205ENST00000553300 FABP5P3A8MUU1 101 aa9.06□□□□□ -0.96
HNRNPC-205ENST00000553300 C9JCJ5 164 aa9.06□□□□□ -0.96
HNRNPC-205ENST00000553300 SMLR1H3BR10 107 aa9.06□□□□□ -0.96
HNRNPC-205ENST00000553300 PEX7O00628 323 aa9.06□□□□□ -0.96
HNRNPC-205ENST00000553300 SIVA1O15304 175 aa9.06□□□□□ -0.96
HNRNPC-205ENST00000553300 SRIP30626 198 aa9.06□□□□□ -0.96
HNRNPC-205ENST00000553300 FGF8P55075 233 aaPredicted RBP9.06□□□□□ -0.96
HNRNPC-205ENST00000553300 ZNF876PQ49A33 203 aa9.06□□□□□ -0.96
HNRNPC-205ENST00000553300 SH2D6Q7Z4S9 175 aa9.06□□□□□ -0.96
HNRNPC-205ENST00000553300 PTH2Q96A98 100 aa9.06□□□□□ -0.96
HNRNPC-205ENST00000553300 ZFP30Q9Y2G7 519 aa9.06□□□□□ -0.96
HNRNPC-205ENST00000553300 K7EQD1 137 aa9.05□□□□□ -0.96
HNRNPC-205ENST00000553300 LYPD5Q6UWN5 251 aa9.05□□□□□ -0.96
HNRNPC-205ENST00000553300 LINC00479Q96M42 142 aa9.05□□□□□ -0.96
HNRNPC-205ENST00000553300 TXNDC17Q9BRA2 123 aa9.05□□□□□ -0.96
HNRNPC-205ENST00000553300 ZNF471Q9BX82 626 aaPredicted RBP9.05□□□□□ -0.96
HNRNPC-205ENST00000553300 C11orf21Q9P2W6 132 aa9.05□□□□□ -0.96
HNRNPC-205ENST00000553300 TRAV34A0A0B4J273 112 aa9.04□□□□□ -0.96
HNRNPC-205ENST00000553300 BCL2L11O43521 198 aa9.04□□□□□ -0.96
HNRNPC-205ENST00000553300 GYPEP15421 78 aa9.04□□□□□ -0.96
HNRNPC-205ENST00000553300 DPPA3Q6W0C5 159 aa9.04□□□□□ -0.96
HNRNPC-205ENST00000553300 OR11H4Q8NGC9 324 aa9.04□□□□□ -0.96
HNRNPC-205ENST00000553300 FMC1Q96HJ9 113 aa9.04□□□□□ -0.96
HNRNPC-205ENST00000553300 C9orf85Q96MD7 179 aa9.04□□□□□ -0.96
HNRNPC-205ENST00000553300 K7EP13 123 aa9.03□□□□□ -0.96
HNRNPC-205ENST00000553300 NXPH4O95158 308 aa9.03□□□□□ -0.96
HNRNPC-205ENST00000553300 MED14OSP0DP75 135 aa9.03□□□□□ -0.96
HNRNPC-205ENST00000553300 UBE2G1P62253 170 aa9.03□□□□□ -0.96
HNRNPC-205ENST00000553300 PIK3CD-AS1Q5SR53 167 aa9.03□□□□□ -0.96
HNRNPC-205ENST00000553300 CST9LP1Q5W188 147 aa9.03□□□□□ -0.96
HNRNPC-205ENST00000553300 COX8CQ7Z4L0 72 aa9.03□□□□□ -0.96
HNRNPC-205ENST00000553300 MBD3L1Q8WWY6 194 aa9.03□□□□□ -0.96
HNRNPC-205ENST00000553300 DNAH11Q96DT5 4516 aa9.03□□□□□ -0.96
HNRNPC-205ENST00000553300 TRAV9-2A0A087WT02 112 aa9.02□□□□□ -0.97
HNRNPC-205ENST00000553300 TRBV6-1A0A0K0K1D8 114 aa9.02□□□□□ -0.97
HNRNPC-205ENST00000553300 RS1O15537 224 aa9.02□□□□□ -0.97
HNRNPC-205ENST00000553300 PFDN1O60925 122 aa9.02□□□□□ -0.97
HNRNPC-205ENST00000553300 RNASE3P12724 160 aaKnown RBP9.02□□□□□ -0.97
HNRNPC-205ENST00000553300 S100A4P26447 101 aaKnown RBP9.02□□□□□ -0.97
HNRNPC-205ENST00000553300 TNP2Q05952 138 aa9.02□□□□□ -0.97
HNRNPC-205ENST00000553300 LGALSLQ3ZCW2 172 aaPredicted RBP9.02□□□□□ -0.97
HNRNPC-205ENST00000553300 Q86TA4 180 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms