RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 SERF2P84101 59 aa8.93□□□□□ -0.98
NPAS3-209ENST00000551008 SOHLH1Q5JUK2 328 aa8.93□□□□□ -0.98
NPAS3-209ENST00000551008 C5orf17Q8NAS9 161 aa8.93□□□□□ -0.98
NPAS3-209ENST00000551008 OR2T35Q8NGX2 323 aa8.93□□□□□ -0.98
NPAS3-209ENST00000551008 ASB13Q8WXK3 278 aa8.93□□□□□ -0.98
NPAS3-209ENST00000551008 RASL10AQ92737 203 aa8.93□□□□□ -0.98
NPAS3-209ENST00000551008 C8orf49Q96NF6 230 aa8.93□□□□□ -0.98
NPAS3-209ENST00000551008 FAM74A1Q5RGS3 127 aa8.92□□□□□ -0.98
NPAS3-209ENST00000551008 FAM159AQ6UWV7 190 aa8.92□□□□□ -0.98
NPAS3-209ENST00000551008 Q6ZRN7 208 aaPredicted RBP8.92□□□□□ -0.98
NPAS3-209ENST00000551008 TREM1Q9NP99 234 aa8.92□□□□□ -0.98
NPAS3-209ENST00000551008 CYTL1Q9NRR1 136 aa8.92□□□□□ -0.98
NPAS3-209ENST00000551008 PRO0255Q9UI72 69 aa8.92□□□□□ -0.98
NPAS3-209ENST00000551008 NAGKQ9UJ70 344 aa8.92□□□□□ -0.98
NPAS3-209ENST00000551008 TRGV11A0A075B6L2 103 aa8.91□□□□□ -0.98
NPAS3-209ENST00000551008 TRAV21A0A0B4J279 112 aa8.91□□□□□ -0.98
NPAS3-209ENST00000551008 MED14OSP0DP75 135 aa8.91□□□□□ -0.98
NPAS3-209ENST00000551008 IQCF2Q8IXL9 164 aa8.91□□□□□ -0.98
NPAS3-209ENST00000551008 TMEM75Q8N9X5 138 aa8.91□□□□□ -0.98
NPAS3-209ENST00000551008 SPXQ9BT56 116 aa8.91□□□□□ -0.98
NPAS3-209ENST00000551008 HHLA3Q9XRX5 114 aa8.91□□□□□ -0.98
NPAS3-209ENST00000551008 ICOSQ9Y6W8 199 aa8.91□□□□□ -0.98
NPAS3-209ENST00000551008 SMLR1H3BR10 107 aa8.9□□□□□ -0.98
NPAS3-209ENST00000551008 CXorf1O96002 111 aa8.9□□□□□ -0.98
NPAS3-209ENST00000551008 MBP02144 154 aa8.9□□□□□ -0.98
NPAS3-209ENST00000551008 SUMO1P63165 101 aaKnown RBP8.9□□□□□ -0.98
NPAS3-209ENST00000551008 RGS21Q2M5E4 152 aa8.9□□□□□ -0.98
NPAS3-209ENST00000551008 INO80EQ8NBZ0 244 aaPredicted RBP8.9□□□□□ -0.98
NPAS3-209ENST00000551008 ACTR3CQ9C0K3 210 aaPredicted RBP8.9□□□□□ -0.98
NPAS3-209ENST00000551008 EPDR1Q9UM22 224 aa8.9□□□□□ -0.98
NPAS3-209ENST00000551008 PSG8Q9UQ74 426 aa8.9□□□□□ -0.98
NPAS3-209ENST00000551008 TRAV4A0A0B4J268 109 aa8.89□□□□□ -0.99
NPAS3-209ENST00000551008 LOC100131303A0A0U1RQF7 123 aa8.89□□□□□ -0.99
NPAS3-209ENST00000551008 SERTM2A0A1B0GWG4 89 aa8.89□□□□□ -0.99
NPAS3-209ENST00000551008 A0A1W2PPQ1 181 aa8.89□□□□□ -0.99
NPAS3-209ENST00000551008 K7EQD1 137 aa8.89□□□□□ -0.99
NPAS3-209ENST00000551008 M0R2P5 195 aa8.89□□□□□ -0.99
NPAS3-209ENST00000551008 NXPH4O95158 308 aa8.89□□□□□ -0.99
NPAS3-209ENST00000551008 TTC32Q5I0X7 151 aa8.89□□□□□ -0.99
NPAS3-209ENST00000551008 LYPD5Q6UWN5 251 aa8.89□□□□□ -0.99
NPAS3-209ENST00000551008 DPPA3Q6W0C5 159 aa8.89□□□□□ -0.99
NPAS3-209ENST00000551008 LINC00479Q96M42 142 aa8.89□□□□□ -0.99
NPAS3-209ENST00000551008 TMEM167BQ9NRX6 74 aa8.89□□□□□ -0.99
NPAS3-209ENST00000551008 TRAV34A0A0B4J273 112 aa8.88□□□□□ -0.99
NPAS3-209ENST00000551008 CTXND1A0A1B0GTU2 59 aa8.88□□□□□ -0.99
NPAS3-209ENST00000551008 FGF8P55075 233 aaPredicted RBP8.88□□□□□ -0.99
NPAS3-209ENST00000551008 LINC00315P59091 139 aa8.88□□□□□ -0.99
NPAS3-209ENST00000551008 FLI1Q01543 452 aaPredicted RBP8.88□□□□□ -0.99
NPAS3-209ENST00000551008 CYB561D1Q8N8Q1 229 aa8.88□□□□□ -0.99
NPAS3-209ENST00000551008 C9orf85Q96MD7 179 aa8.88□□□□□ -0.99
NPAS3-209ENST00000551008 KRTAP4-5Q9BYR2 181 aa8.88□□□□□ -0.99
NPAS3-209ENST00000551008 PCLOQ9Y6V0 5065 aa8.87□□□□□ -0.99
NPAS3-209ENST00000551008 BORCS7-ASMTA0A0B4J1R7 106 aa8.87□□□□□ -0.99
NPAS3-209ENST00000551008 TRGV4A0A0C4DH28 118 aa8.87□□□□□ -0.99
NPAS3-209ENST00000551008 A0A1W2PRE2 83 aa8.87□□□□□ -0.99
NPAS3-209ENST00000551008 SIVA1O15304 175 aa8.87□□□□□ -0.99
NPAS3-209ENST00000551008 ARPC5O15511 151 aa8.87□□□□□ -0.99
NPAS3-209ENST00000551008 GCGP01275 180 aa8.87□□□□□ -0.99
NPAS3-209ENST00000551008 RNASE3P12724 160 aaKnown RBP8.87□□□□□ -0.99
NPAS3-209ENST00000551008 GYPEP15421 78 aa8.87□□□□□ -0.99
NPAS3-209ENST00000551008 KRTAP10-2P60368 255 aa8.87□□□□□ -0.99
NPAS3-209ENST00000551008 SLAQ13239 276 aa8.87□□□□□ -0.99
NPAS3-209ENST00000551008 MRPL23Q16540 153 aaKnown RBP8.87□□□□□ -0.99
NPAS3-209ENST00000551008 PRNTQ86SH4 94 aa8.87□□□□□ -0.99
NPAS3-209ENST00000551008 OR11H4Q8NGC9 324 aa8.87□□□□□ -0.99
NPAS3-209ENST00000551008 SDF2L1Q9HCN8 221 aa8.87□□□□□ -0.99
NPAS3-209ENST00000551008 TNFRSF18Q9Y5U5 241 aa8.87□□□□□ -0.99
NPAS3-209ENST00000551008 FAM74A7A6NL05 159 aa8.86□□□□□ -0.99
NPAS3-209ENST00000551008 PFN1P07737 140 aaKnown RBP8.86□□□□□ -0.99
NPAS3-209ENST00000551008 GATA1P15976 413 aaPredicted RBP8.86□□□□□ -0.99
NPAS3-209ENST00000551008 UBE2G2P60604 165 aa8.86□□□□□ -0.99
NPAS3-209ENST00000551008 NEGR1Q7Z3B1 354 aa8.86□□□□□ -0.99
NPAS3-209ENST00000551008 WFDC10BQ8IUB3 73 aa8.86□□□□□ -0.99
NPAS3-209ENST00000551008 KCNS1Q96KK3 526 aa8.86□□□□□ -0.99
NPAS3-209ENST00000551008 IGKV3D-20A0A0C4DH25 116 aa8.85□□□□□ -0.99
NPAS3-209ENST00000551008 BTF3P20290 206 aaKnown RBP8.85□□□□□ -0.99
NPAS3-209ENST00000551008 FHITP49789 147 aa8.85□□□□□ -0.99
NPAS3-209ENST00000551008 SMUG1Q53HV7 270 aa8.85□□□□□ -0.99
NPAS3-209ENST00000551008 Q86TA4 180 aa8.85□□□□□ -0.99
NPAS3-209ENST00000551008 NDFIP1Q9BT67 221 aa8.85□□□□□ -0.99
NPAS3-209ENST00000551008 ARL2-SNX15V9GYD0 113 aa8.85□□□□□ -0.99
NPAS3-209ENST00000551008 PGPEP1LA6NFU8 196 aa8.84□□□□□ -0.99
NPAS3-209ENST00000551008 C16orf90A8MZG2 172 aa8.84□□□□□ -0.99
NPAS3-209ENST00000551008 PEX7O00628 323 aa8.84□□□□□ -0.99
NPAS3-209ENST00000551008 TAAR5O14804 337 aa8.84□□□□□ -0.99
NPAS3-209ENST00000551008 RS1O15537 224 aa8.84□□□□□ -0.99
NPAS3-209ENST00000551008 CRIP1P50238 77 aa8.84□□□□□ -0.99
NPAS3-209ENST00000551008 ZNF506Q5JVG8 444 aa8.84□□□□□ -0.99
NPAS3-209ENST00000551008 CFAP126Q5VTH2 177 aa8.84□□□□□ -0.99
NPAS3-209ENST00000551008 SPATA12Q7Z6I5 190 aa8.84□□□□□ -0.99
NPAS3-209ENST00000551008 KCNRGQ8N5I3 272 aa8.84□□□□□ -0.99
NPAS3-209ENST00000551008 OR4C5Q8NGB2 326 aa8.84□□□□□ -0.99
NPAS3-209ENST00000551008 MAP1LC3B2A6NCE7 125 aa8.83□□□□□ -1
NPAS3-209ENST00000551008 C9JCJ5 164 aa8.83□□□□□ -1
NPAS3-209ENST00000551008 K7EQM0 130 aa8.83□□□□□ -1
NPAS3-209ENST00000551008 SRIP30626 198 aa8.83□□□□□ -1
NPAS3-209ENST00000551008 ZNF876PQ49A33 203 aa8.83□□□□□ -1
NPAS3-209ENST00000551008 AKR1C8PQ5T2L2 129 aa8.83□□□□□ -1
NPAS3-209ENST00000551008 Q6ZSN1 163 aa8.83□□□□□ -1
NPAS3-209ENST00000551008 PTH2Q96A98 100 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms