RNA–Protein interactions for RNA: ENST00000550527.5

APAF1-209, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 6,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-209ENST00000550527 TRIP6Q15654 476 aaKnown RBP3.89□□□□□ -1.79
APAF1-209ENST00000550527 PATE2Q6UY27 113 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 URB1-AS1Q96HZ7 61 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 TIMM17AQ99595 171 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 DPM3Q9P2X0 92 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 TNS1Q9HBL0 1735 aaKnown RBP3.89□□□□□ -1.79
APAF1-209ENST00000550527 BRCA2P51587 3418 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 TRBV12-3P01733 135 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 IGHV3-30P01768 117 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 IGHV3-30-5P0DP03 117 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 C4orf26Q17RF5 130 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 Q6JHZ5 121 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 IGF2-ASQ6U949 168 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 ZNF833PQ6ZTB9 187 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 TMEM61Q8N0U2 210 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 P0C879 139 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 CD59P13987 128 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 ZNRF2Q8NHG8 242 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 CFHR4Q92496 578 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 IGLV3-12A0A075B6K2 115 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 RPL36AP83881 106 aaKnown RBP3.89□□□□□ -1.79
APAF1-209ENST00000550527 MIAQ16674 131 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 NEXN-AS1Q8NBZ9 246 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 RPL36ALQ969Q0 106 aaKnown RBP3.89□□□□□ -1.79
APAF1-209ENST00000550527 IGHV1-2P23083 117 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 C1orf210Q8IVY1 113 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 ZNF524Q96C55 264 aa3.89□□□□□ -1.79
APAF1-209ENST00000550527 RPP25Q9BUL9 199 aaKnown RBP3.89□□□□□ -1.79
APAF1-209ENST00000550527 H3BQ85 93 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 CRYGAP11844 174 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 PLA2G5P39877 138 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 GGNQ86UU5 652 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 DAND5Q8N907 189 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 SPTSSBQ8NFR3 76 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 KIR2DL5BQ8NHK3 375 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 WISP1O95388 367 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 IGHV1-69P01742 117 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 WT1-ASQ06250 92 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 KIAA0100Q14667 2235 aaKnown RBP3.88□□□□□ -1.79
APAF1-209ENST00000550527 IGKV1D-17A0A075B6S4 117 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 MBD3L4A6NDZ8 208 aaPredicted RBP3.88□□□□□ -1.79
APAF1-209ENST00000550527 MBD3L3A6NE82 208 aaPredicted RBP3.88□□□□□ -1.79
APAF1-209ENST00000550527 MBD3L5A6NJ08 208 aaPredicted RBP3.88□□□□□ -1.79
APAF1-209ENST00000550527 H7C423 109 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 NXPH4O95158 308 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 TRGV3P03979 118 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 LINC00322Q6ZN03 302 aaPredicted RBP3.88□□□□□ -1.79
APAF1-209ENST00000550527 WFDC9Q8NEX5 89 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 C14orf132Q9NPU4 83 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 TICRRQ7Z2Z1 1910 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 LINC01565O15544 149 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 DPH3Q96FX2 82 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 MSRB1Q9NZV6 116 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 NUP210LQ5VU65 1888 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 LINC01587Q99440 93 aa3.88□□□□□ -1.79
APAF1-209ENST00000550527 IGHV1OR15-1A0A075B7D0 117 aa3.87□□□□□ -1.79
APAF1-209ENST00000550527 LST1O00453 97 aa3.87□□□□□ -1.79
APAF1-209ENST00000550527 BLCAPP62952 87 aa3.87□□□□□ -1.79
APAF1-209ENST00000550527 TMEM263Q8WUH6 116 aaKnown RBP3.87□□□□□ -1.79
APAF1-209ENST00000550527 C17orf77Q96MU5 243 aa3.87□□□□□ -1.79
APAF1-209ENST00000550527 IGHV1-3A0A0C4DH29 117 aa3.87□□□□□ -1.79
APAF1-209ENST00000550527 FOXE3Q13461 319 aa3.87□□□□□ -1.79
APAF1-209ENST00000550527 Q6ZS52 159 aa3.87□□□□□ -1.79
APAF1-209ENST00000550527 RPL39LQ96EH5 51 aaKnown RBP3.87□□□□□ -1.79
APAF1-209ENST00000550527 Q9H8V8 135 aa3.87□□□□□ -1.79
APAF1-209ENST00000550527 MYOFQ9NZM1 2061 aa3.87□□□□□ -1.79
APAF1-209ENST00000550527 A0A0J9YXY3 114 aa3.87□□□□□ -1.79
APAF1-209ENST00000550527 TFF2Q03403 129 aa3.87□□□□□ -1.79
APAF1-209ENST00000550527 KRTAP27-1Q3LI81 207 aa3.87□□□□□ -1.79
APAF1-209ENST00000550527 MRPL53Q96EL3 112 aaKnown RBP3.87□□□□□ -1.79
APAF1-209ENST00000550527 GAFA1Q96PS6 74 aa3.87□□□□□ -1.79
APAF1-209ENST00000550527 ASCC3Q8N3C0 2202 aaKnown RBP3.87□□□□□ -1.79
APAF1-209ENST00000550527 PF4P02776 101 aa3.87□□□□□ -1.79
APAF1-209ENST00000550527 UBE2D1P51668 147 aa3.87□□□□□ -1.79
APAF1-209ENST00000550527 PRB3Q04118 309 aaPredicted RBP3.87□□□□□ -1.79
APAF1-209ENST00000550527 PRO0461Q9UI25 63 aa3.87□□□□□ -1.79
APAF1-209ENST00000550527 PYGO1Q9Y3Y4 419 aa3.87□□□□□ -1.79
APAF1-209ENST00000550527 WI2-2373I1.2A0A1W2PRP0 233 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 CCL21O00585 134 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 PAX8Q06710 450 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 NSUN5P1Q3KNT7 163 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 ZNF576Q9H609 170 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 ZMAT4Q9H898 229 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 CCL4P13236 92 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 HOXD3P31249 432 aaPredicted RBP3.86□□□□□ -1.79
APAF1-209ENST00000550527 C17orf58Q2M2W7 97 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 URB1O60287 2271 aaKnown RBP3.86□□□□□ -1.79
APAF1-209ENST00000550527 C16orf97H3BN30 126 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 C6orf226Q5I0X4 101 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 WDR86Q86TI4 376 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 SIRPDQ9H106 197 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 RALGAPA1Q6GYQ0 2036 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 PRR19A6NJB7 356 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 ENHOQ6UWT2 76 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 HHLA3Q9XRX5 114 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 LAMA3Q16787 3333 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 IGHV3-73A0A0B4J1V6 119 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 IGHV1-58A0A0C4DH39 117 aa3.86□□□□□ -1.79
APAF1-209ENST00000550527 ZNF134P52741 427 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms