RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 UBE2G1P62253 170 aa18.3■□□□□ 0.52
CPSF6-205ENST00000550075 Q86TA4 180 aa18.3■□□□□ 0.52
CPSF6-205ENST00000550075 C8orf49Q96NF6 230 aa18.3■□□□□ 0.52
CPSF6-205ENST00000550075 SDF2L1Q9HCN8 221 aa18.3■□□□□ 0.52
CPSF6-205ENST00000550075 TRAV34A0A0B4J273 112 aa18.29■□□□□ 0.52
CPSF6-205ENST00000550075 SPINK4O60575 86 aa18.29■□□□□ 0.52
CPSF6-205ENST00000550075 SULT1A2P50226 295 aa18.29■□□□□ 0.52
CPSF6-205ENST00000550075 LGALS9BQ3B8N2 356 aa18.29■□□□□ 0.52
CPSF6-205ENST00000550075 FMC1Q96HJ9 113 aa18.29■□□□□ 0.52
CPSF6-205ENST00000550075 SPXQ9BT56 116 aa18.29■□□□□ 0.52
CPSF6-205ENST00000550075 PFN1P07737 140 aaKnown RBP18.28■□□□□ 0.52
CPSF6-205ENST00000550075 LINC00479Q96M42 142 aa18.28■□□□□ 0.52
CPSF6-205ENST00000550075 C18orf15Q96N68 181 aa18.28■□□□□ 0.52
CPSF6-205ENST00000550075 A0A1B0GVG6 124 aa18.27■□□□□ 0.52
CPSF6-205ENST00000550075 AKR1C3P42330 323 aa18.27■□□□□ 0.52
CPSF6-205ENST00000550075 MANBALQ9NQG1 85 aa18.27■□□□□ 0.52
CPSF6-205ENST00000550075 TRAV1-1A0A0B4J248 108 aa18.26■□□□□ 0.51
CPSF6-205ENST00000550075 MRPL16Q9NX20 251 aaKnown RBP18.26■□□□□ 0.51
CPSF6-205ENST00000550075 ZFP30Q9Y2G7 519 aa18.26■□□□□ 0.51
CPSF6-205ENST00000550075 OR5I1Q13606 314 aa18.25■□□□□ 0.51
CPSF6-205ENST00000550075 MDFICQ9P1T7 246 aa18.25■□□□□ 0.51
CPSF6-205ENST00000550075 ZNF80P51504 273 aaPredicted RBP18.24■□□□□ 0.51
CPSF6-205ENST00000550075 UBE2DNLQ8IWF7 75 aa18.24■□□□□ 0.51
CPSF6-205ENST00000550075 TRBV6-1A0A0K0K1D8 114 aa18.23■□□□□ 0.51
CPSF6-205ENST00000550075 TYMSP04818 313 aa18.23■□□□□ 0.51
CPSF6-205ENST00000550075 S100A9P06702 114 aaKnown RBP18.23■□□□□ 0.51
CPSF6-205ENST00000550075 GNG13Q9P2W3 67 aa18.23■□□□□ 0.51
CPSF6-205ENST00000550075 IGHV3-16A0A0C4DH30 117 aa18.22■□□□□ 0.51
CPSF6-205ENST00000550075 GNRH2O43555 120 aa18.21■□□□□ 0.51
CPSF6-205ENST00000550075 NUDT3O95989 172 aa18.21■□□□□ 0.51
CPSF6-205ENST00000550075 IFNA1P01562 189 aa18.21■□□□□ 0.51
CPSF6-205ENST00000550075 POM121L12Q8N7R1 296 aa18.21■□□□□ 0.51
CPSF6-205ENST00000550075 TXNDC17Q9BRA2 123 aa18.21■□□□□ 0.51
CPSF6-205ENST00000550075 TRAV26-1A0A087WT03 109 aa18.2■□□□□ 0.5
CPSF6-205ENST00000550075 FABP5P3A8MUU1 101 aa18.2■□□□□ 0.5
CPSF6-205ENST00000550075 HOXA5P20719 270 aa18.2■□□□□ 0.5
CPSF6-205ENST00000550075 MUC4Q99102 2169 aa18.2■□□□□ 0.5
CPSF6-205ENST00000550075 HYDINQ4G0P3 5121 aa18.2■□□□□ 0.5
CPSF6-205ENST00000550075 SCO2A0A1W2PP80 73 aa18.19■□□□□ 0.5
CPSF6-205ENST00000550075 M0R2P5 195 aa18.19■□□□□ 0.5
CPSF6-205ENST00000550075 C11orf21Q9P2W6 132 aa18.19■□□□□ 0.5
CPSF6-205ENST00000550075 VPS13DQ5THJ4 4388 aa18.19■□□□□ 0.5
CPSF6-205ENST00000550075 H3BNG1 76 aa18.18■□□□□ 0.5
CPSF6-205ENST00000550075 LTAP01374 205 aa18.18■□□□□ 0.5
CPSF6-205ENST00000550075 RNF212Q495C1 297 aa18.18■□□□□ 0.5
CPSF6-205ENST00000550075 COX8CQ7Z4L0 72 aa18.18■□□□□ 0.5
CPSF6-205ENST00000550075 RASL10AQ92737 203 aa18.18■□□□□ 0.5
CPSF6-205ENST00000550075 CCL20P78556 96 aa18.17■□□□□ 0.5
CPSF6-205ENST00000550075 ZC2HC1AQ96GY0 325 aa18.17■□□□□ 0.5
CPSF6-205ENST00000550075 SLAQ13239 276 aa18.16■□□□□ 0.5
CPSF6-205ENST00000550075 FAM162BQ5T6X4 162 aa18.16■□□□□ 0.5
CPSF6-205ENST00000550075 A0A0J9YY99 117 aa18.15■□□□□ 0.5
CPSF6-205ENST00000550075 IGHV3-53P01767 116 aa18.15■□□□□ 0.5
CPSF6-205ENST00000550075 NKX2-5P52952 324 aaPredicted RBP18.15■□□□□ 0.5
CPSF6-205ENST00000550075 DNAH6Q9C0G6 4158 aa18.14■□□□□ 0.49
CPSF6-205ENST00000550075 ORM1P02763 201 aa18.14■□□□□ 0.49
CPSF6-205ENST00000550075 TAGLN2P37802 199 aaKnown RBP18.14■□□□□ 0.49
CPSF6-205ENST00000550075 FAM3BP58499 235 aaPredicted RBP18.14■□□□□ 0.49
CPSF6-205ENST00000550075 ALKAL2Q6UX46 152 aa18.14■□□□□ 0.49
CPSF6-205ENST00000550075 TRAV4A0A0B4J268 109 aa18.13■□□□□ 0.49
CPSF6-205ENST00000550075 B4DEV8 164 aa18.13■□□□□ 0.49
CPSF6-205ENST00000550075 SH2D1AO60880 128 aa18.13■□□□□ 0.49
CPSF6-205ENST00000550075 S100A4P26447 101 aaKnown RBP18.13■□□□□ 0.49
CPSF6-205ENST00000550075 ASIPP42127 132 aa18.13■□□□□ 0.49
CPSF6-205ENST00000550075 C11orf52Q96A22 123 aa18.13■□□□□ 0.49
CPSF6-205ENST00000550075 PRO0255Q9UI72 69 aa18.13■□□□□ 0.49
CPSF6-205ENST00000550075 TRGV4A0A0C4DH28 118 aa18.12■□□□□ 0.49
CPSF6-205ENST00000550075 CCL18P55774 89 aa18.12■□□□□ 0.49
CPSF6-205ENST00000550075 BLOC1S1P78537 153 aa18.12■□□□□ 0.49
CPSF6-205ENST00000550075 MEF2BQ02080 365 aaPredicted RBP18.12■□□□□ 0.49
CPSF6-205ENST00000550075 C9orf85Q96MD7 179 aa18.12■□□□□ 0.49
CPSF6-205ENST00000550075 KMT2AQ03164 3969 aa18.12■□□□□ 0.49
CPSF6-205ENST00000550075 PDE6DO43924 150 aa18.11■□□□□ 0.49
CPSF6-205ENST00000550075 BCL2P10415 239 aa18.11■□□□□ 0.49
CPSF6-205ENST00000550075 BAGE2Q86Y30 109 aa18.11■□□□□ 0.49
CPSF6-205ENST00000550075 OR4C5Q8NGB2 326 aa18.11■□□□□ 0.49
CPSF6-205ENST00000550075 IGKV3D-20A0A0C4DH25 116 aa18.1■□□□□ 0.49
CPSF6-205ENST00000550075 PAX4O43316 350 aa18.1■□□□□ 0.49
CPSF6-205ENST00000550075 ZNF674Q2M3X9 581 aa18.1■□□□□ 0.49
CPSF6-205ENST00000550075 ZNF876PQ49A33 203 aa18.1■□□□□ 0.49
CPSF6-205ENST00000550075 NHLRC2Q8NBF2 726 aa18.1■□□□□ 0.49
CPSF6-205ENST00000550075 C9JCJ5 164 aa18.09■□□□□ 0.49
CPSF6-205ENST00000550075 RPL35P42766 123 aaKnown RBP18.09■□□□□ 0.49
CPSF6-205ENST00000550075 CRIP1P50238 77 aa18.09■□□□□ 0.49
CPSF6-205ENST00000550075 PTH2Q96A98 100 aa18.09■□□□□ 0.49
CPSF6-205ENST00000550075 ZNF479Q96JC4 524 aa18.09■□□□□ 0.49
CPSF6-205ENST00000550075 VAX2Q9UIW0 290 aa18.09■□□□□ 0.49
CPSF6-205ENST00000550075 HHLA3Q9XRX5 114 aa18.09■□□□□ 0.49
CPSF6-205ENST00000550075 M0R036 132 aa18.08■□□□□ 0.48
CPSF6-205ENST00000550075 SFTA3P0C7M3 94 aa18.08■□□□□ 0.48
CPSF6-205ENST00000550075 RNASE3P12724 160 aaKnown RBP18.08■□□□□ 0.48
CPSF6-205ENST00000550075 FHL2Q14192 279 aa18.08■□□□□ 0.48
CPSF6-205ENST00000550075 VSIG2Q96IQ7 327 aa18.08■□□□□ 0.48
CPSF6-205ENST00000550075 ICOSQ9Y6W8 199 aa18.08■□□□□ 0.48
CPSF6-205ENST00000550075 KRBOX1C9JBD0 128 aa18.07■□□□□ 0.48
CPSF6-205ENST00000550075 LINC01559Q495D7 138 aa18.07■□□□□ 0.48
CPSF6-205ENST00000550075 CIDEAO60543 219 aa18.06■□□□□ 0.48
CPSF6-205ENST00000550075 CRYBA4P53673 196 aa18.06■□□□□ 0.48
CPSF6-205ENST00000550075 IL36BQ9NZH7 164 aa18.06■□□□□ 0.48
CPSF6-205ENST00000550075 BOLA1Q9Y3E2 137 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms