RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 PHLDA3Q9Y5J5 127 aa10.49□□□□□ -0.73
PRPF40B-209ENST00000548825 CLPSL1A2RUU4 121 aa10.49□□□□□ -0.73
PRPF40B-209ENST00000548825 H3BUT2 72 aa10.49□□□□□ -0.73
PRPF40B-209ENST00000548825 C12orf54Q6X4T0 127 aa10.49□□□□□ -0.73
PRPF40B-209ENST00000548825 RNASE8Q8TDE3 154 aaKnown RBP10.49□□□□□ -0.73
PRPF40B-209ENST00000548825 SCRT2Q9NQ03 307 aa10.49□□□□□ -0.73
PRPF40B-209ENST00000548825 PIMREGQ9BSJ6 248 aa10.48□□□□□ -0.73
PRPF40B-209ENST00000548825 MOB4Q9Y3A3 225 aa10.48□□□□□ -0.73
PRPF40B-209ENST00000548825 CHD6Q8TD26 2715 aa10.48□□□□□ -0.73
PRPF40B-209ENST00000548825 GNRH2O43555 120 aa10.48□□□□□ -0.73
PRPF40B-209ENST00000548825 S100A7P31151 101 aa10.48□□□□□ -0.73
PRPF40B-209ENST00000548825 PRR9Q5T870 116 aa10.48□□□□□ -0.73
PRPF40B-209ENST00000548825 OR4X2Q8NGF9 303 aa10.48□□□□□ -0.73
PRPF40B-209ENST00000548825 OR10J6PQ8NGY7 276 aa10.48□□□□□ -0.73
PRPF40B-209ENST00000548825 C20orf173Q96LM9 149 aa10.48□□□□□ -0.73
PRPF40B-209ENST00000548825 LINC01545Q5VT33 79 aa10.48□□□□□ -0.73
PRPF40B-209ENST00000548825 SFTA2Q6UW10 78 aa10.48□□□□□ -0.73
PRPF40B-209ENST00000548825 OOSP1A8MZH6 123 aa10.47□□□□□ -0.73
PRPF40B-209ENST00000548825 IGHV1-69DA0A0B4J2H0 117 aa10.47□□□□□ -0.73
PRPF40B-209ENST00000548825 IGHV1-69P01742 117 aa10.47□□□□□ -0.73
PRPF40B-209ENST00000548825 RPS20P60866 119 aaKnown RBP10.47□□□□□ -0.73
PRPF40B-209ENST00000548825 UBE2V1Q13404 147 aa10.47□□□□□ -0.73
PRPF40B-209ENST00000548825 VPS25Q9BRG1 176 aa10.47□□□□□ -0.73
PRPF40B-209ENST00000548825 TRAV8-2A0A0B4J237 113 aa10.46□□□□□ -0.73
PRPF40B-209ENST00000548825 ZNF688P0C7X2 276 aa10.46□□□□□ -0.73
PRPF40B-209ENST00000548825 SFTPCP11686 197 aa10.46□□□□□ -0.73
PRPF40B-209ENST00000548825 TRAV12-2A0A075B6T6 113 aa10.46□□□□□ -0.73
PRPF40B-209ENST00000548825 A0A1B0GW15 77 aa10.46□□□□□ -0.73
PRPF40B-209ENST00000548825 TMEM97Q5BJF2 176 aa10.46□□□□□ -0.73
PRPF40B-209ENST00000548825 ZC2HC1BQ5TFG8 222 aa10.46□□□□□ -0.73
PRPF40B-209ENST00000548825 C1orf122Q6ZSJ8 110 aa10.46□□□□□ -0.73
PRPF40B-209ENST00000548825 SLC50A1Q9BRV3 221 aa10.46□□□□□ -0.73
PRPF40B-209ENST00000548825 A0A087WWL8 130 aa10.46□□□□□ -0.74
PRPF40B-209ENST00000548825 RHPN1-AS1Q9BWJ2 59 aa10.46□□□□□ -0.74
PRPF40B-209ENST00000548825 TAX1BP3O14907 124 aa10.45□□□□□ -0.74
PRPF40B-209ENST00000548825 PAX2Q02962 417 aa10.45□□□□□ -0.74
PRPF40B-209ENST00000548825 OR2K2Q8NGT1 345 aa10.45□□□□□ -0.74
PRPF40B-209ENST00000548825 RPL39LQ96EH5 51 aaKnown RBP10.45□□□□□ -0.74
PRPF40B-209ENST00000548825 AJUBAQ96IF1 538 aa10.45□□□□□ -0.74
PRPF40B-209ENST00000548825 LINC00477Q96M19 166 aa10.45□□□□□ -0.74
PRPF40B-209ENST00000548825 K7ERJ3 54 aa10.45□□□□□ -0.74
PRPF40B-209ENST00000548825 TGFAP01135 160 aa10.45□□□□□ -0.74
PRPF40B-209ENST00000548825 SMIM17P0DL12 118 aa10.45□□□□□ -0.74
PRPF40B-209ENST00000548825 COX8AP10176 69 aa10.45□□□□□ -0.74
PRPF40B-209ENST00000548825 SCGB2A2Q13296 93 aa10.45□□□□□ -0.74
PRPF40B-209ENST00000548825 MYOZ3Q8TDC0 251 aa10.45□□□□□ -0.74
PRPF40B-209ENST00000548825 RNF185Q96GF1 192 aa10.45□□□□□ -0.74
PRPF40B-209ENST00000548825 CRXO43186 299 aaPredicted RBP10.45□□□□□ -0.74
PRPF40B-209ENST00000548825 NPFFR1Q9GZQ6 430 aa10.45□□□□□ -0.74
PRPF40B-209ENST00000548825 JPT2Q9H910 190 aa10.45□□□□□ -0.74
PRPF40B-209ENST00000548825 IGKV2D-26A0A0A0MRZ7 120 aa10.44□□□□□ -0.74
PRPF40B-209ENST00000548825 TRBV7-1A0A0A6YYK4 115 aa10.44□□□□□ -0.74
PRPF40B-209ENST00000548825 AVPP01185 164 aa10.44□□□□□ -0.74
PRPF40B-209ENST00000548825 EBI3Q14213 229 aa10.44□□□□□ -0.74
PRPF40B-209ENST00000548825 ANXA2RQ3ZCQ2 193 aa10.44□□□□□ -0.74
PRPF40B-209ENST00000548825 USP24Q9UPU5 2620 aa10.44□□□□□ -0.74
PRPF40B-209ENST00000548825 NIPBLQ6KC79 2804 aaeCLIP10.44□□□□□ -0.74
PRPF40B-209ENST00000548825 TRAV12-3A0A0B4J271 114 aa10.44□□□□□ -0.74
PRPF40B-209ENST00000548825 TMEM8BA6NDV4 472 aa10.44□□□□□ -0.74
PRPF40B-209ENST00000548825 IGLC6P0CF74 106 aa10.44□□□□□ -0.74
PRPF40B-209ENST00000548825 C11orf44Q8N8P7 122 aa10.44□□□□□ -0.74
PRPF40B-209ENST00000548825 ORAOV1Q8WV07 137 aa10.44□□□□□ -0.74
PRPF40B-209ENST00000548825 GAGE10A6NGK3 116 aa10.43□□□□□ -0.74
PRPF40B-209ENST00000548825 IGHV4-59P01825 116 aa10.43□□□□□ -0.74
PRPF40B-209ENST00000548825 MTURNQ8N3F0 131 aa10.43□□□□□ -0.74
PRPF40B-209ENST00000548825 MRPL35Q9NZE8 188 aaKnown RBP10.43□□□□□ -0.74
PRPF40B-209ENST00000548825 ZNF493Q6ZR52 646 aa10.43□□□□□ -0.74
PRPF40B-209ENST00000548825 DUX3Q96PT4 197 aa10.43□□□□□ -0.74
PRPF40B-209ENST00000548825 GAGE1Q13065 139 aa10.42□□□□□ -0.74
PRPF40B-209ENST00000548825 RAB9AP51151 201 aa10.42□□□□□ -0.74
PRPF40B-209ENST00000548825 PSMG4Q5JS54 123 aa10.41□□□□□ -0.74
PRPF40B-209ENST00000548825 C2orf91Q6ZV80 131 aa10.41□□□□□ -0.74
PRPF40B-209ENST00000548825 MS4A6AQ9H2W1 248 aa10.41□□□□□ -0.74
PRPF40B-209ENST00000548825 FLNAP21333 2647 aaKnown RBP10.41□□□□□ -0.74
PRPF40B-209ENST00000548825 CD7P09564 240 aa10.41□□□□□ -0.74
PRPF40B-209ENST00000548825 NHP2Q9NX24 153 aaKnown RBP10.41□□□□□ -0.74
PRPF40B-209ENST00000548825 ZNF256Q9Y2P7 627 aaPredicted RBP10.41□□□□□ -0.74
PRPF40B-209ENST00000548825 IGHV3-73A0A0B4J1V6 119 aa10.4□□□□□ -0.74
PRPF40B-209ENST00000548825 TRBV6-1A0A0K0K1D8 114 aa10.4□□□□□ -0.74
PRPF40B-209ENST00000548825 MRPL52Q86TS9 123 aaKnown RBP10.4□□□□□ -0.74
PRPF40B-209ENST00000548825 PIFOQ8TCI5 191 aa10.4□□□□□ -0.74
PRPF40B-209ENST00000548825 IGKCP01834 107 aa10.4□□□□□ -0.74
PRPF40B-209ENST00000548825 ASIPP42127 132 aa10.4□□□□□ -0.74
PRPF40B-209ENST00000548825 ZNF48Q96MX3 618 aaPredicted RBP10.4□□□□□ -0.74
PRPF40B-209ENST00000548825 SCGB3A1Q96QR1 104 aa10.4□□□□□ -0.74
PRPF40B-209ENST00000548825 JMJD8Q96S16 334 aa10.4□□□□□ -0.74
PRPF40B-209ENST00000548825 KLK9Q9UKQ9 250 aa10.4□□□□□ -0.74
PRPF40B-209ENST00000548825 MSMBP08118 114 aa10.4□□□□□ -0.75
PRPF40B-209ENST00000548825 DEFB136Q30KP8 78 aa10.4□□□□□ -0.75
PRPF40B-209ENST00000548825 NXT2Q9NPJ8 142 aaKnown RBP10.4□□□□□ -0.75
PRPF40B-209ENST00000548825 SYNJ2BPP57105 145 aa10.39□□□□□ -0.75
PRPF40B-209ENST00000548825 DEFB125Q8N687 156 aa10.39□□□□□ -0.75
PRPF40B-209ENST00000548825 PRM2P04554 102 aa10.39□□□□□ -0.75
PRPF40B-209ENST00000548825 LAGE3Q14657 143 aa10.39□□□□□ -0.75
PRPF40B-209ENST00000548825 BEX4Q9NWD9 120 aaPredicted RBP10.39□□□□□ -0.75
PRPF40B-209ENST00000548825 CD5LO43866 347 aa10.38□□□□□ -0.75
PRPF40B-209ENST00000548825 LGALS9BQ3B8N2 356 aa10.38□□□□□ -0.75
PRPF40B-209ENST00000548825 LINC01559Q495D7 138 aa10.38□□□□□ -0.75
PRPF40B-209ENST00000548825 LGALS9CQ6DKI2 356 aa10.38□□□□□ -0.75
PRPF40B-209ENST00000548825 PPBPP02775 128 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms