RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 PTPRGP23470 1445 aa0.99□□□□□ -2.25
LEMD3-206ENST00000545026 ARHGAP31Q2M1Z3 1444 aa0.99□□□□□ -2.25
LEMD3-206ENST00000545026 LOC101927531A0A1B0GV80 90 aa0.99□□□□□ -2.25
LEMD3-206ENST00000545026 C9JAW5 83 aa0.99□□□□□ -2.25
LEMD3-206ENST00000545026 TPST1O60507 370 aa0.99□□□□□ -2.25
LEMD3-206ENST00000545026 IL7P13232 177 aa0.99□□□□□ -2.25
LEMD3-206ENST00000545026 HIST1H1BP16401 226 aaKnown RBP0.99□□□□□ -2.25
LEMD3-206ENST00000545026 FXYD3Q14802 87 aa0.99□□□□□ -2.25
LEMD3-206ENST00000545026 GLYATL3Q5SZD4 288 aa0.99□□□□□ -2.25
LEMD3-206ENST00000545026 TMEM244Q5VVB8 128 aa0.99□□□□□ -2.25
LEMD3-206ENST00000545026 SPANXA1Q9NS26 97 aa0.99□□□□□ -2.25
LEMD3-206ENST00000545026 HIGD1AQ9Y241 93 aa0.99□□□□□ -2.25
LEMD3-206ENST00000545026 TMEM91Q6ZNR0 172 aa0.98□□□□□ -2.25
LEMD3-206ENST00000545026 TCTE3Q8IZS6 198 aa0.98□□□□□ -2.25
LEMD3-206ENST00000545026 DMAC1Q96GE9 116 aa0.98□□□□□ -2.25
LEMD3-206ENST00000545026 CALML5Q9NZT1 146 aa0.98□□□□□ -2.25
LEMD3-206ENST00000545026 A0A0G2JMM0 328 aa0.97□□□□□ -2.25
LEMD3-206ENST00000545026 HIGD1CA8MV81 97 aa0.97□□□□□ -2.25
LEMD3-206ENST00000545026 ADCYAP1P18509 176 aa0.97□□□□□ -2.25
LEMD3-206ENST00000545026 CMPK1P30085 196 aa0.97□□□□□ -2.25
LEMD3-206ENST00000545026 FXYD6P3P58550 94 aa0.97□□□□□ -2.25
LEMD3-206ENST00000545026 C5orf56Q8N8D9 126 aa0.97□□□□□ -2.25
LEMD3-206ENST00000545026 SPANXCQ9NY87 97 aa0.97□□□□□ -2.25
LEMD3-206ENST00000545026 APCP25054 2843 aa0.97□□□□□ -2.25
LEMD3-206ENST00000545026 MUC5BQ9HC84 5762 aaPredicted RBP0.96□□□□□ -2.25
LEMD3-206ENST00000545026 CD3DP04234 171 aa0.96□□□□□ -2.26
LEMD3-206ENST00000545026 CCDC153Q494R4 210 aa0.96□□□□□ -2.26
LEMD3-206ENST00000545026 PYDC1Q8WXC3 89 aa0.96□□□□□ -2.26
LEMD3-206ENST00000545026 NINQ8N4C6 2090 aa0.96□□□□□ -2.26
LEMD3-206ENST00000545026 BORCS7-ASMTA0A0B4J1R7 106 aa0.95□□□□□ -2.26
LEMD3-206ENST00000545026 LY6G6CO95867 125 aa0.95□□□□□ -2.26
LEMD3-206ENST00000545026 BANF2Q9H503 90 aa0.95□□□□□ -2.26
LEMD3-206ENST00000545026 DNAJC15Q9Y5T4 150 aa0.95□□□□□ -2.26
LEMD3-206ENST00000545026 MYH1P12882 1939 aa0.95□□□□□ -2.26
LEMD3-206ENST00000545026 KDM5CP41229 1560 aa0.95□□□□□ -2.26
LEMD3-206ENST00000545026 OR2H2O95918 312 aa0.94□□□□□ -2.26
LEMD3-206ENST00000545026 SCGB1A1P11684 91 aa0.94□□□□□ -2.26
LEMD3-206ENST00000545026 IQCJQ1A5X6 159 aa0.94□□□□□ -2.26
LEMD3-206ENST00000545026 SLC35B3Q9H1N7 401 aa0.94□□□□□ -2.26
LEMD3-206ENST00000545026 ATG5Q9H1Y0 275 aa0.94□□□□□ -2.26
LEMD3-206ENST00000545026 NAV3Q8IVL0 2385 aa0.94□□□□□ -2.26
LEMD3-206ENST00000545026 KDELR1P24390 212 aa0.93□□□□□ -2.26
LEMD3-206ENST00000545026 PLGLB1Q02325 96 aa0.93□□□□□ -2.26
LEMD3-206ENST00000545026 ZNF56Q15929 161 aa0.93□□□□□ -2.26
LEMD3-206ENST00000545026 AIF1LQ9BQI0 150 aa0.93□□□□□ -2.26
LEMD3-206ENST00000545026 GPR98Q8WXG9 6306 aa0.93□□□□□ -2.26
LEMD3-206ENST00000545026 KIDINS220Q9ULH0 1771 aa0.93□□□□□ -2.26
LEMD3-206ENST00000545026 SMIM24O75264 130 aa0.92□□□□□ -2.26
LEMD3-206ENST00000545026 HLA-DRB4P13762 266 aa0.92□□□□□ -2.26
LEMD3-206ENST00000545026 HLA-DRB4X5D2U9 266 aa0.92□□□□□ -2.26
LEMD3-206ENST00000545026 LRP5O75197 1615 aa0.92□□□□□ -2.26
LEMD3-206ENST00000545026 TRPM7Q96QT4 1865 aa0.92□□□□□ -2.26
LEMD3-206ENST00000545026 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
LEMD3-206ENST00000545026 DBIP07108 87 aaKnown RBP0.91□□□□□ -2.26
LEMD3-206ENST00000545026 POLR2JP52435 117 aaKnown RBP0.91□□□□□ -2.26
LEMD3-206ENST00000545026 FAM103A1Q9BTL3 118 aaKnown RBP0.91□□□□□ -2.26
LEMD3-206ENST00000545026 ZCCHC6Q5VYS8 1495 aaKnown RBP0.91□□□□□ -2.26
LEMD3-206ENST00000545026 CDK12Q9NYV4 1490 aaPredicted RBP0.91□□□□□ -2.26
LEMD3-206ENST00000545026 AKR1D1P51857 326 aa0.9□□□□□ -2.27
LEMD3-206ENST00000545026 SPINK13Q1W4C9 94 aa0.9□□□□□ -2.27
LEMD3-206ENST00000545026 MORN2Q502X0 79 aa0.9□□□□□ -2.27
LEMD3-206ENST00000545026 UNQ5815/PRO19632Q6UWF5 114 aa0.9□□□□□ -2.27
LEMD3-206ENST00000545026 MAGOHBQ96A72 148 aaKnown RBP0.9□□□□□ -2.27
LEMD3-206ENST00000545026 CPDO75976 1380 aa0.89□□□□□ -2.27
LEMD3-206ENST00000545026 CCKP06307 115 aa0.89□□□□□ -2.27
LEMD3-206ENST00000545026 SPAG17Q6Q759 2223 aa0.89□□□□□ -2.27
LEMD3-206ENST00000545026 UNC13AQ9UPW8 1703 aa0.89□□□□□ -2.27
LEMD3-206ENST00000545026 TRBV10-1A0A0K0K1A3 114 aa0.88□□□□□ -2.27
LEMD3-206ENST00000545026 FXYD1O00168 92 aa0.88□□□□□ -2.27
LEMD3-206ENST00000545026 SPINK7P58062 85 aa0.88□□□□□ -2.27
LEMD3-206ENST00000545026 RPL37P61927 97 aaKnown RBP0.88□□□□□ -2.27
LEMD3-206ENST00000545026 SLC25A26Q70HW3 274 aa0.88□□□□□ -2.27
LEMD3-206ENST00000545026 HELZP42694 1942 aaKnown RBP0.87□□□□□ -2.27
LEMD3-206ENST00000545026 TRAV17A0A0B4J275 112 aa0.87□□□□□ -2.27
LEMD3-206ENST00000545026 FRAS1Q86XX4 4008 aa0.87□□□□□ -2.27
LEMD3-206ENST00000545026 ATG2AQ2TAZ0 1938 aa0.86□□□□□ -2.27
LEMD3-206ENST00000545026 PRH1P02810 166 aa0.86□□□□□ -2.27
LEMD3-206ENST00000545026 PPDPFLQ8WWR9 84 aa0.86□□□□□ -2.27
LEMD3-206ENST00000545026 TAS2R8Q9NYW2 309 aa0.86□□□□□ -2.27
LEMD3-206ENST00000545026 PLAC8Q9NZF1 115 aa0.86□□□□□ -2.27
LEMD3-206ENST00000545026 BCORL1Q5H9F3 1711 aa0.86□□□□□ -2.27
LEMD3-206ENST00000545026 CXorf51AA0A1B0GTR3 108 aa0.85□□□□□ -2.27
LEMD3-206ENST00000545026 MEGF8Q7Z7M0 2845 aa0.85□□□□□ -2.27
LEMD3-206ENST00000545026 BLMP54132 1417 aaPredicted RBP0.84□□□□□ -2.27
LEMD3-206ENST00000545026 LOC285556D6RIA3 1793 aa0.84□□□□□ -2.27
LEMD3-206ENST00000545026 KLKP1Q107X0 134 aa0.84□□□□□ -2.27
LEMD3-206ENST00000545026 CLLU1Q5K131 121 aa0.84□□□□□ -2.27
LEMD3-206ENST00000545026 SNX29P2Q8IUI4 249 aa0.84□□□□□ -2.27
LEMD3-206ENST00000545026 ARPC5O15511 151 aa0.83□□□□□ -2.28
LEMD3-206ENST00000545026 RBP4P02753 201 aa0.83□□□□□ -2.28
LEMD3-206ENST00000545026 ATP6V0E2Q8NHE4 81 aa0.83□□□□□ -2.28
LEMD3-206ENST00000545026 CCDC171Q6TFL3 1326 aa0.83□□□□□ -2.28
LEMD3-206ENST00000545026 USP24Q9UPU5 2620 aa0.83□□□□□ -2.28
LEMD3-206ENST00000545026 UHRF1BP1LA0JNW5 1464 aa0.82□□□□□ -2.28
LEMD3-206ENST00000545026 TRAV2A0A0B4J234 112 aa0.82□□□□□ -2.28
LEMD3-206ENST00000545026 TFF1P04155 84 aa0.82□□□□□ -2.28
LEMD3-206ENST00000545026 KRTAP21-1Q3LI58 79 aa0.82□□□□□ -2.28
LEMD3-206ENST00000545026 SMR3AQ99954 134 aa0.82□□□□□ -2.28
LEMD3-206ENST00000545026 BATF3Q9NR55 127 aa0.82□□□□□ -2.28
LEMD3-206ENST00000545026 LSM2Q9Y333 95 aaKnown RBP0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms