RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 MRPS16Q9Y3D3 137 aaKnown RBP11.72□□□□□ -0.53
HOXD8-204ENST00000544999 DNAH17Q9UFH2 4485 aa11.72□□□□□ -0.53
HOXD8-204ENST00000544999 HECTD4Q9Y4D8 3996 aa11.71□□□□□ -0.53
HOXD8-204ENST00000544999 IGHV3-16A0A0C4DH30 117 aa11.71□□□□□ -0.53
HOXD8-204ENST00000544999 FBLL1A6NHQ2 334 aaKnown RBP11.71□□□□□ -0.53
HOXD8-204ENST00000544999 SMLR1H3BR10 107 aa11.71□□□□□ -0.53
HOXD8-204ENST00000544999 GNRH2O43555 120 aa11.71□□□□□ -0.53
HOXD8-204ENST00000544999 TYMSP04818 313 aa11.71□□□□□ -0.53
HOXD8-204ENST00000544999 FHL2Q14192 279 aa11.71□□□□□ -0.53
HOXD8-204ENST00000544999 KCNS1Q96KK3 526 aa11.71□□□□□ -0.53
HOXD8-204ENST00000544999 SDF2L1Q9HCN8 221 aa11.71□□□□□ -0.53
HOXD8-204ENST00000544999 ICOSQ9Y6W8 199 aa11.71□□□□□ -0.53
HOXD8-204ENST00000544999 DNAH2Q9P225 4427 aa11.7□□□□□ -0.54
HOXD8-204ENST00000544999 IGLV2-11P01706 119 aa11.7□□□□□ -0.54
HOXD8-204ENST00000544999 CRYBA4P53673 196 aa11.7□□□□□ -0.54
HOXD8-204ENST00000544999 FLI1Q01543 452 aaPredicted RBP11.7□□□□□ -0.54
HOXD8-204ENST00000544999 ZNF345Q14585 488 aa11.7□□□□□ -0.54
HOXD8-204ENST00000544999 C8orf49Q96NF6 230 aa11.7□□□□□ -0.54
HOXD8-204ENST00000544999 HHLA3Q9XRX5 114 aa11.7□□□□□ -0.54
HOXD8-204ENST00000544999 FAT2Q9NYQ8 4349 aa11.69□□□□□ -0.54
HOXD8-204ENST00000544999 TRGV4A0A0C4DH28 118 aa11.69□□□□□ -0.54
HOXD8-204ENST00000544999 M0R2P5 195 aa11.69□□□□□ -0.54
HOXD8-204ENST00000544999 ZFP69Q49AA0 526 aa11.69□□□□□ -0.54
HOXD8-204ENST00000544999 SMUG1Q53HV7 270 aa11.69□□□□□ -0.54
HOXD8-204ENST00000544999 PRNTQ86SH4 94 aa11.69□□□□□ -0.54
HOXD8-204ENST00000544999 C6orf223Q8N319 242 aa11.69□□□□□ -0.54
HOXD8-204ENST00000544999 KCNRGQ8N5I3 272 aa11.69□□□□□ -0.54
HOXD8-204ENST00000544999 NKX6-2Q9C056 277 aaPredicted RBP11.69□□□□□ -0.54
HOXD8-204ENST00000544999 TRAV4A0A0B4J268 109 aa11.68□□□□□ -0.54
HOXD8-204ENST00000544999 GCGP01275 180 aa11.68□□□□□ -0.54
HOXD8-204ENST00000544999 PFN1P07737 140 aaKnown RBP11.68□□□□□ -0.54
HOXD8-204ENST00000544999 SFTA3P0C7M3 94 aa11.68□□□□□ -0.54
HOXD8-204ENST00000544999 ZNF80P51504 273 aaPredicted RBP11.68□□□□□ -0.54
HOXD8-204ENST00000544999 FGF8P55075 233 aaPredicted RBP11.68□□□□□ -0.54
HOXD8-204ENST00000544999 TTC32Q5I0X7 151 aa11.68□□□□□ -0.54
HOXD8-204ENST00000544999 SAPCD1Q5SSQ6 148 aa11.68□□□□□ -0.54
HOXD8-204ENST00000544999 ZNF479Q96JC4 524 aa11.68□□□□□ -0.54
HOXD8-204ENST00000544999 MAP1LC3B2A6NCE7 125 aa11.67□□□□□ -0.54
HOXD8-204ENST00000544999 FAM74A7A6NL05 159 aa11.67□□□□□ -0.54
HOXD8-204ENST00000544999 HMSDA8MTL9 139 aa11.67□□□□□ -0.54
HOXD8-204ENST00000544999 UBE2G2P60604 165 aa11.67□□□□□ -0.54
HOXD8-204ENST00000544999 MAP1LC3BQ9GZQ8 125 aa11.67□□□□□ -0.54
HOXD8-204ENST00000544999 A0A1W2PPQ1 181 aa11.66□□□□□ -0.54
HOXD8-204ENST00000544999 IFNA7P01567 189 aa11.66□□□□□ -0.54
HOXD8-204ENST00000544999 PPT1P50897 306 aa11.66□□□□□ -0.54
HOXD8-204ENST00000544999 MRPL23Q16540 153 aaKnown RBP11.66□□□□□ -0.54
HOXD8-204ENST00000544999 OR11H4Q8NGC9 324 aa11.66□□□□□ -0.54
HOXD8-204ENST00000544999 HIST1H2BAQ96A08 127 aa11.66□□□□□ -0.54
HOXD8-204ENST00000544999 C11orf21Q9P2W6 132 aa11.66□□□□□ -0.54
HOXD8-204ENST00000544999 TRAV34A0A0B4J273 112 aa11.65□□□□□ -0.54
HOXD8-204ENST00000544999 A0A0D9SG52 128 aa11.65□□□□□ -0.54
HOXD8-204ENST00000544999 PEX7O00628 323 aa11.65□□□□□ -0.54
HOXD8-204ENST00000544999 OR4C5Q8NGB2 326 aa11.65□□□□□ -0.54
HOXD8-204ENST00000544999 STOML3Q8TAV4 291 aa11.65□□□□□ -0.54
HOXD8-204ENST00000544999 LINC00479Q96M42 142 aa11.65□□□□□ -0.54
HOXD8-204ENST00000544999 ARL2-SNX15V9GYD0 113 aa11.65□□□□□ -0.54
HOXD8-204ENST00000544999 ORM1P02763 201 aa11.64□□□□□ -0.55
HOXD8-204ENST00000544999 SEC11BP0C7V7 166 aa11.64□□□□□ -0.55
HOXD8-204ENST00000544999 NEGR1Q7Z3B1 354 aa11.64□□□□□ -0.55
HOXD8-204ENST00000544999 KRTAP1-5Q9BYS1 174 aa11.64□□□□□ -0.55
HOXD8-204ENST00000544999 KANTRA0A1W2PQU2 76 aa11.63□□□□□ -0.55
HOXD8-204ENST00000544999 K7EQD1 137 aa11.63□□□□□ -0.55
HOXD8-204ENST00000544999 BCL2L11O43521 198 aa11.63□□□□□ -0.55
HOXD8-204ENST00000544999 BTF3P20290 206 aaKnown RBP11.63□□□□□ -0.55
HOXD8-204ENST00000544999 TNP2Q05952 138 aa11.63□□□□□ -0.55
HOXD8-204ENST00000544999 Q86TA4 180 aa11.63□□□□□ -0.55
HOXD8-204ENST00000544999 PCNPQ8WW12 178 aaKnown RBP11.63□□□□□ -0.55
HOXD8-204ENST00000544999 C9orf85Q96MD7 179 aa11.63□□□□□ -0.55
HOXD8-204ENST00000544999 UMAD1C9J7I0 102 aa11.62□□□□□ -0.55
HOXD8-204ENST00000544999 SIVA1O15304 175 aa11.62□□□□□ -0.55
HOXD8-204ENST00000544999 GYPEP15421 78 aa11.62□□□□□ -0.55
HOXD8-204ENST00000544999 SRIP30626 198 aa11.62□□□□□ -0.55
HOXD8-204ENST00000544999 FHITP49789 147 aa11.62□□□□□ -0.55
HOXD8-204ENST00000544999 LYPD5Q6UWN5 251 aa11.62□□□□□ -0.55
HOXD8-204ENST00000544999 PTH2Q96A98 100 aa11.62□□□□□ -0.55
HOXD8-204ENST00000544999 TCEAL7Q9BRU2 100 aa11.62□□□□□ -0.55
HOXD8-204ENST00000544999 ZNF471Q9BX82 626 aaPredicted RBP11.62□□□□□ -0.55
HOXD8-204ENST00000544999 FABP5P3A8MUU1 101 aa11.61□□□□□ -0.55
HOXD8-204ENST00000544999 C9JCJ5 164 aa11.61□□□□□ -0.55
HOXD8-204ENST00000544999 CIDEAO60543 219 aa11.61□□□□□ -0.55
HOXD8-204ENST00000544999 NXPH4O95158 308 aa11.61□□□□□ -0.55
HOXD8-204ENST00000544999 EIF5AP63241 154 aaKnown RBP11.61□□□□□ -0.55
HOXD8-204ENST00000544999 ZNF876PQ49A33 203 aa11.61□□□□□ -0.55
HOXD8-204ENST00000544999 RS1O15537 224 aa11.6□□□□□ -0.55
HOXD8-204ENST00000544999 RNASE3P12724 160 aaKnown RBP11.6□□□□□ -0.55
HOXD8-204ENST00000544999 GATA1P15976 413 aaPredicted RBP11.6□□□□□ -0.55
HOXD8-204ENST00000544999 DPPA3Q6W0C5 159 aa11.6□□□□□ -0.55
HOXD8-204ENST00000544999 MBD3L1Q8WWY6 194 aa11.6□□□□□ -0.55
HOXD8-204ENST00000544999 FMC1Q96HJ9 113 aa11.6□□□□□ -0.55
HOXD8-204ENST00000544999 TXNDC17Q9BRA2 123 aa11.6□□□□□ -0.55
HOXD8-204ENST00000544999 ZFP30Q9Y2G7 519 aa11.6□□□□□ -0.55
HOXD8-204ENST00000544999 IGKV3D-20A0A0C4DH25 116 aa11.59□□□□□ -0.55
HOXD8-204ENST00000544999 TRBV6-1A0A0K0K1D8 114 aa11.59□□□□□ -0.55
HOXD8-204ENST00000544999 UBE2G1P62253 170 aa11.59□□□□□ -0.55
HOXD8-204ENST00000544999 CST9LP1Q5W188 147 aa11.59□□□□□ -0.55
HOXD8-204ENST00000544999 COX8CQ7Z4L0 72 aa11.59□□□□□ -0.55
HOXD8-204ENST00000544999 FAM213BQ8TBF2 198 aa11.59□□□□□ -0.55
HOXD8-204ENST00000544999 PGPEP1LA6NFU8 196 aa11.58□□□□□ -0.56
HOXD8-204ENST00000544999 S100A4P26447 101 aaKnown RBP11.58□□□□□ -0.56
HOXD8-204ENST00000544999 ZNF506Q5JVG8 444 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms