RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 SERF2P84101 59 aa11.11□□□□□ -0.63
DDX55-212ENST00000544738 NEGR1Q7Z3B1 354 aa11.11□□□□□ -0.63
DDX55-212ENST00000544738 ASB13Q8WXK3 278 aa11.11□□□□□ -0.63
DDX55-212ENST00000544738 TREM1Q9NP99 234 aa11.11□□□□□ -0.63
DDX55-212ENST00000544738 NAGKQ9UJ70 344 aa11.11□□□□□ -0.63
DDX55-212ENST00000544738 K7EQM0 130 aa11.1□□□□□ -0.63
DDX55-212ENST00000544738 HMGB3O15347 200 aaKnown RBP11.1□□□□□ -0.63
DDX55-212ENST00000544738 STAG3L2P0CL84 134 aa11.1□□□□□ -0.63
DDX55-212ENST00000544738 STAG3L3P0CL85 134 aa11.1□□□□□ -0.63
DDX55-212ENST00000544738 ARL14EPLP0DKL9 152 aa11.1□□□□□ -0.63
DDX55-212ENST00000544738 KCNS1Q96KK3 526 aa11.1□□□□□ -0.63
DDX55-212ENST00000544738 NDFIP1Q9BT67 221 aa11.1□□□□□ -0.63
DDX55-212ENST00000544738 NXPH4O95158 308 aa11.09□□□□□ -0.63
DDX55-212ENST00000544738 ORM1P02763 201 aa11.09□□□□□ -0.63
DDX55-212ENST00000544738 FUSP35637 526 aaKnown RBP eCLIP11.09□□□□□ -0.63
DDX55-212ENST00000544738 LYPD5Q6UWN5 251 aa11.09□□□□□ -0.63
DDX55-212ENST00000544738 C5orf17Q8NAS9 161 aa11.09□□□□□ -0.63
DDX55-212ENST00000544738 PCNPQ8WW12 178 aaKnown RBP11.09□□□□□ -0.63
DDX55-212ENST00000544738 RAB24Q969Q5 203 aa11.09□□□□□ -0.63
DDX55-212ENST00000544738 ZNF479Q96JC4 524 aa11.09□□□□□ -0.63
DDX55-212ENST00000544738 TRAV8-1A0A0A6YYK1 113 aa11.08□□□□□ -0.64
DDX55-212ENST00000544738 M0R2P5 195 aa11.08□□□□□ -0.64
DDX55-212ENST00000544738 GNRH2O43555 120 aa11.08□□□□□ -0.64
DDX55-212ENST00000544738 SFTA3P0C7M3 94 aa11.08□□□□□ -0.64
DDX55-212ENST00000544738 ATP6V0CP27449 155 aa11.08□□□□□ -0.64
DDX55-212ENST00000544738 SRIP30626 198 aa11.08□□□□□ -0.64
DDX55-212ENST00000544738 GNG5P63218 68 aa11.08□□□□□ -0.64
DDX55-212ENST00000544738 INO80EQ8NBZ0 244 aaPredicted RBP11.08□□□□□ -0.64
DDX55-212ENST00000544738 SUN5Q8TC36 379 aa11.08□□□□□ -0.64
DDX55-212ENST00000544738 TVP23CQ96ET8 276 aa11.08□□□□□ -0.64
DDX55-212ENST00000544738 SDF2L1Q9HCN8 221 aa11.08□□□□□ -0.64
DDX55-212ENST00000544738 TNFSF18Q9UNG2 199 aa11.08□□□□□ -0.64
DDX55-212ENST00000544738 TRAV4A0A0B4J268 109 aa11.07□□□□□ -0.64
DDX55-212ENST00000544738 IGHV3-16A0A0C4DH30 117 aa11.07□□□□□ -0.64
DDX55-212ENST00000544738 F6UZH7 168 aa11.07□□□□□ -0.64
DDX55-212ENST00000544738 CXorf1O96002 111 aa11.07□□□□□ -0.64
DDX55-212ENST00000544738 SMR3BP02814 79 aaPredicted RBP11.07□□□□□ -0.64
DDX55-212ENST00000544738 TCRAP04437 139 aa11.07□□□□□ -0.64
DDX55-212ENST00000544738 GIPP09681 153 aaPredicted RBP11.07□□□□□ -0.64
DDX55-212ENST00000544738 GCHFRP30047 84 aa11.07□□□□□ -0.64
DDX55-212ENST00000544738 LINC00315P59091 139 aa11.07□□□□□ -0.64
DDX55-212ENST00000544738 OR4C5Q8NGB2 326 aa11.07□□□□□ -0.64
DDX55-212ENST00000544738 TMEM167BQ9NRX6 74 aa11.07□□□□□ -0.64
DDX55-212ENST00000544738 TRAV9-2A0A087WT02 112 aa11.06□□□□□ -0.64
DDX55-212ENST00000544738 K7EP13 123 aa11.06□□□□□ -0.64
DDX55-212ENST00000544738 K7EQD1 137 aa11.06□□□□□ -0.64
DDX55-212ENST00000544738 TYMSP04818 313 aa11.06□□□□□ -0.64
DDX55-212ENST00000544738 TXNDC17Q9BRA2 123 aa11.06□□□□□ -0.64
DDX55-212ENST00000544738 ACTR3CQ9C0K3 210 aaPredicted RBP11.06□□□□□ -0.64
DDX55-212ENST00000544738 BORCS7-ASMTA0A0B4J1R7 106 aa11.05□□□□□ -0.64
DDX55-212ENST00000544738 FBLL1A6NHQ2 334 aaKnown RBP11.05□□□□□ -0.64
DDX55-212ENST00000544738 C9JCJ5 164 aa11.05□□□□□ -0.64
DDX55-212ENST00000544738 TAAR5O14804 337 aa11.05□□□□□ -0.64
DDX55-212ENST00000544738 GYPEP15421 78 aa11.05□□□□□ -0.64
DDX55-212ENST00000544738 SUMO1P63165 101 aaKnown RBP11.05□□□□□ -0.64
DDX55-212ENST00000544738 SH2D6Q7Z4S9 175 aa11.05□□□□□ -0.64
DDX55-212ENST00000544738 PGPEP1Q9NXJ5 209 aa11.05□□□□□ -0.64
DDX55-212ENST00000544738 ZFP69Q49AA0 526 aa11.04□□□□□ -0.64
DDX55-212ENST00000544738 Q5BKY6 102 aa11.04□□□□□ -0.64
DDX55-212ENST00000544738 NFE4Q86UQ8 179 aa11.04□□□□□ -0.64
DDX55-212ENST00000544738 SGK494Q96LW2 274 aa11.04□□□□□ -0.64
DDX55-212ENST00000544738 EPDR1Q9UM22 224 aa11.04□□□□□ -0.64
DDX55-212ENST00000544738 PSG8Q9UQ74 426 aa11.04□□□□□ -0.64
DDX55-212ENST00000544738 LY96Q9Y6Y9 160 aa11.04□□□□□ -0.64
DDX55-212ENST00000544738 CIDEAO60543 219 aa11.03□□□□□ -0.64
DDX55-212ENST00000544738 FLI1Q01543 452 aaPredicted RBP11.03□□□□□ -0.64
DDX55-212ENST00000544738 SAPCD1Q5SSQ6 148 aa11.03□□□□□ -0.64
DDX55-212ENST00000544738 Q6ZRN7 208 aaPredicted RBP11.03□□□□□ -0.64
DDX55-212ENST00000544738 CYB561D1Q8N8Q1 229 aa11.03□□□□□ -0.64
DDX55-212ENST00000544738 SH3BGRL3Q9H299 93 aa11.03□□□□□ -0.64
DDX55-212ENST00000544738 HMCN2Q8NDA2 5059 aa11.03□□□□□ -0.64
DDX55-212ENST00000544738 FXYD6-FXYD2A0A087WZ82 144 aa11.02□□□□□ -0.65
DDX55-212ENST00000544738 A0A1W2PRE2 83 aa11.02□□□□□ -0.65
DDX55-212ENST00000544738 RNF222A6NCQ9 220 aa11.02□□□□□ -0.65
DDX55-212ENST00000544738 EREGO14944 169 aa11.02□□□□□ -0.65
DDX55-212ENST00000544738 GCGP01275 180 aa11.02□□□□□ -0.65
DDX55-212ENST00000544738 PFN1P07737 140 aaKnown RBP11.02□□□□□ -0.65
DDX55-212ENST00000544738 ZNF876PQ49A33 203 aa11.02□□□□□ -0.65
DDX55-212ENST00000544738 SMUG1Q53HV7 270 aa11.02□□□□□ -0.65
DDX55-212ENST00000544738 RPL7L1Q6DKI1 246 aaKnown RBP11.02□□□□□ -0.65
DDX55-212ENST00000544738 TMEM75Q8N9X5 138 aa11.02□□□□□ -0.65
DDX55-212ENST00000544738 GGTLC3B5MD39 225 aa11.01□□□□□ -0.65
DDX55-212ENST00000544738 FAM229AH3BQW9 127 aa11.01□□□□□ -0.65
DDX55-212ENST00000544738 IGLV2-11P01706 119 aa11.01□□□□□ -0.65
DDX55-212ENST00000544738 GATA1P15976 413 aaPredicted RBP11.01□□□□□ -0.65
DDX55-212ENST00000544738 EVI2AP22794 236 aa11.01□□□□□ -0.65
DDX55-212ENST00000544738 ZNF80P51504 273 aaPredicted RBP11.01□□□□□ -0.65
DDX55-212ENST00000544738 OR2T35Q8NGX2 323 aa11.01□□□□□ -0.65
DDX55-212ENST00000544738 CTXND1A0A1B0GTU2 59 aa11□□□□□ -0.65
DDX55-212ENST00000544738 TIRAPP58753 221 aa11□□□□□ -0.65
DDX55-212ENST00000544738 ERVFC1-1P60608 527 aa11□□□□□ -0.65
DDX55-212ENST00000544738 PRNTQ86SH4 94 aa11□□□□□ -0.65
DDX55-212ENST00000544738 NHLRC2Q8NBF2 726 aa11□□□□□ -0.65
DDX55-212ENST00000544738 PTH2Q96A98 100 aa11□□□□□ -0.65
DDX55-212ENST00000544738 NKX6-2Q9C056 277 aaPredicted RBP11□□□□□ -0.65
DDX55-212ENST00000544738 C11orf21Q9P2W6 132 aa11□□□□□ -0.65
DDX55-212ENST00000544738 BOLA1Q9Y3E2 137 aa11□□□□□ -0.65
DDX55-212ENST00000544738 DNAH10OSP0CZ25 163 aa10.99□□□□□ -0.65
DDX55-212ENST00000544738 PPT1P50897 306 aa10.99□□□□□ -0.65
DDX55-212ENST00000544738 WFDC10BQ8IUB3 73 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms