RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 TMEM167BQ9NRX6 74 aa14.39□□□□□ -0.11
CHFR-217ENST00000540537 LRP1BQ9NZR2 4599 aa14.39□□□□□ -0.11
CHFR-217ENST00000540537 C16orf90A8MZG2 172 aa14.38□□□□□ -0.11
CHFR-217ENST00000540537 M0R2P5 195 aa14.38□□□□□ -0.11
CHFR-217ENST00000540537 GNRH2O43555 120 aa14.38□□□□□ -0.11
CHFR-217ENST00000540537 NXPH4O95158 308 aa14.38□□□□□ -0.11
CHFR-217ENST00000540537 CXorf1O96002 111 aa14.38□□□□□ -0.11
CHFR-217ENST00000540537 TCRAP04437 139 aa14.38□□□□□ -0.11
CHFR-217ENST00000540537 KCNS1Q96KK3 526 aa14.38□□□□□ -0.11
CHFR-217ENST00000540537 ACTR3CQ9C0K3 210 aaPredicted RBP14.38□□□□□ -0.11
CHFR-217ENST00000540537 TRAV4A0A0B4J268 109 aa14.37□□□□□ -0.11
CHFR-217ENST00000540537 RNF222A6NCQ9 220 aa14.37□□□□□ -0.11
CHFR-217ENST00000540537 K7EQM0 130 aa14.37□□□□□ -0.11
CHFR-217ENST00000540537 TYMSP04818 313 aa14.37□□□□□ -0.11
CHFR-217ENST00000540537 LYPD5Q6UWN5 251 aa14.37□□□□□ -0.11
CHFR-217ENST00000540537 NEGR1Q7Z3B1 354 aa14.37□□□□□ -0.11
CHFR-217ENST00000540537 FXYD6-FXYD2A0A087WZ82 144 aa14.36□□□□□ -0.11
CHFR-217ENST00000540537 BORCS7-ASMTA0A0B4J1R7 106 aa14.36□□□□□ -0.11
CHFR-217ENST00000540537 ORM1P02763 201 aa14.36□□□□□ -0.11
CHFR-217ENST00000540537 RPL7L1Q6DKI1 246 aaKnown RBP14.36□□□□□ -0.11
CHFR-217ENST00000540537 SGK494Q96LW2 274 aa14.36□□□□□ -0.11
CHFR-217ENST00000540537 GGTLC3B5MD39 225 aa14.35□□□□□ -0.11
CHFR-217ENST00000540537 K7EQD1 137 aa14.35□□□□□ -0.11
CHFR-217ENST00000540537 SRIP30626 198 aa14.35□□□□□ -0.11
CHFR-217ENST00000540537 OR4C5Q8NGB2 326 aa14.35□□□□□ -0.11
CHFR-217ENST00000540537 PCNPQ8WW12 178 aaKnown RBP14.35□□□□□ -0.11
CHFR-217ENST00000540537 PSG8Q9UQ74 426 aa14.35□□□□□ -0.11
CHFR-217ENST00000540537 HSPG2P98160 4391 aa14.34□□□□□ -0.11
CHFR-217ENST00000540537 IGLV2-11P01706 119 aa14.34□□□□□ -0.11
CHFR-217ENST00000540537 GYPEP15421 78 aa14.34□□□□□ -0.11
CHFR-217ENST00000540537 LINC00315P59091 139 aa14.34□□□□□ -0.11
CHFR-217ENST00000540537 SUMO1P63165 101 aaKnown RBP14.34□□□□□ -0.11
CHFR-217ENST00000540537 CYB561D1Q8N8Q1 229 aa14.34□□□□□ -0.11
CHFR-217ENST00000540537 OR2T35Q8NGX2 323 aa14.34□□□□□ -0.11
CHFR-217ENST00000540537 EPDR1Q9UM22 224 aa14.34□□□□□ -0.11
CHFR-217ENST00000540537 FBLL1A6NHQ2 334 aaKnown RBP14.33□□□□□ -0.12
CHFR-217ENST00000540537 FLI1Q01543 452 aaPredicted RBP14.33□□□□□ -0.12
CHFR-217ENST00000540537 TMEM75Q8N9X5 138 aa14.33□□□□□ -0.12
CHFR-217ENST00000540537 A0A1W2PRE2 83 aa14.32□□□□□ -0.12
CHFR-217ENST00000540537 C9JCJ5 164 aa14.32□□□□□ -0.12
CHFR-217ENST00000540537 TAAR5O14804 337 aa14.32□□□□□ -0.12
CHFR-217ENST00000540537 GCGP01275 180 aa14.32□□□□□ -0.12
CHFR-217ENST00000540537 ZNF80P51504 273 aaPredicted RBP14.32□□□□□ -0.12
CHFR-217ENST00000540537 SPATA12Q7Z6I5 190 aa14.32□□□□□ -0.12
CHFR-217ENST00000540537 TXNDC17Q9BRA2 123 aa14.32□□□□□ -0.12
CHFR-217ENST00000540537 CTXND1A0A1B0GTU2 59 aa14.31□□□□□ -0.12
CHFR-217ENST00000540537 PFN1P07737 140 aaKnown RBP14.31□□□□□ -0.12
CHFR-217ENST00000540537 RGS21Q2M5E4 152 aa14.31□□□□□ -0.12
CHFR-217ENST00000540537 ZFP69Q49AA0 526 aa14.31□□□□□ -0.12
CHFR-217ENST00000540537 SMUG1Q53HV7 270 aa14.31□□□□□ -0.12
CHFR-217ENST00000540537 Q6ZRN7 208 aaPredicted RBP14.31□□□□□ -0.12
CHFR-217ENST00000540537 C11orf21Q9P2W6 132 aa14.31□□□□□ -0.12
CHFR-217ENST00000540537 CDK2AP2O75956 126 aa14.3□□□□□ -0.12
CHFR-217ENST00000540537 GATA1P15976 413 aaPredicted RBP14.3□□□□□ -0.12
CHFR-217ENST00000540537 ZNF726P1Q15940 193 aa14.3□□□□□ -0.12
CHFR-217ENST00000540537 SAPCD1Q5SSQ6 148 aa14.3□□□□□ -0.12
CHFR-217ENST00000540537 PRNTQ86SH4 94 aa14.3□□□□□ -0.12
CHFR-217ENST00000540537 G3V3Q6 166 aa14.29□□□□□ -0.12
CHFR-217ENST00000540537 SH2D6Q7Z4S9 175 aa14.29□□□□□ -0.12
CHFR-217ENST00000540537 LY96Q9Y6Y9 160 aa14.29□□□□□ -0.12
CHFR-217ENST00000540537 DNAH5Q8TE73 4624 aa14.29□□□□□ -0.12
CHFR-217ENST00000540537 K7EP13 123 aa14.28□□□□□ -0.12
CHFR-217ENST00000540537 CIDEAO60543 219 aa14.28□□□□□ -0.12
CHFR-217ENST00000540537 ZNF876PQ49A33 203 aa14.28□□□□□ -0.12
CHFR-217ENST00000540537 AKR1C8PQ5T2L2 129 aa14.28□□□□□ -0.12
CHFR-217ENST00000540537 C9orf85Q96MD7 179 aa14.28□□□□□ -0.12
CHFR-217ENST00000540537 ABCA13Q86UQ4 5058 aa14.27□□□□□ -0.12
CHFR-217ENST00000540537 TRAV9-2A0A087WT02 112 aa14.27□□□□□ -0.13
CHFR-217ENST00000540537 NFE4Q86UQ8 179 aa14.27□□□□□ -0.13
CHFR-217ENST00000540537 PTH2Q96A98 100 aa14.27□□□□□ -0.13
CHFR-217ENST00000540537 LOC100131303A0A0U1RQF7 123 aa14.26□□□□□ -0.13
CHFR-217ENST00000540537 RS1O15537 224 aa14.26□□□□□ -0.13
CHFR-217ENST00000540537 IFNA7P01567 189 aa14.26□□□□□ -0.13
CHFR-217ENST00000540537 PPT1P50897 306 aa14.26□□□□□ -0.13
CHFR-217ENST00000540537 KRTAP10-2P60368 255 aa14.26□□□□□ -0.13
CHFR-217ENST00000540537 WFDC10BQ8IUB3 73 aa14.26□□□□□ -0.13
CHFR-217ENST00000540537 NKX6-2Q9C056 277 aaPredicted RBP14.26□□□□□ -0.13
CHFR-217ENST00000540537 APOBP04114 4563 aaKnown RBP14.26□□□□□ -0.13
CHFR-217ENST00000540537 ARPC5O15511 151 aa14.25□□□□□ -0.13
CHFR-217ENST00000540537 DNAH10OSP0CZ25 163 aa14.25□□□□□ -0.13
CHFR-217ENST00000540537 TIRAPP58753 221 aa14.25□□□□□ -0.13
CHFR-217ENST00000540537 UBE2G2P60604 165 aa14.25□□□□□ -0.13
CHFR-217ENST00000540537 CFAP126Q5VTH2 177 aa14.25□□□□□ -0.13
CHFR-217ENST00000540537 DPPA3Q6W0C5 159 aa14.25□□□□□ -0.13
CHFR-217ENST00000540537 LINC00479Q96M42 142 aa14.25□□□□□ -0.13
CHFR-217ENST00000540537 TRAV34A0A0B4J273 112 aa14.24□□□□□ -0.13
CHFR-217ENST00000540537 FAM74A7A6NL05 159 aa14.24□□□□□ -0.13
CHFR-217ENST00000540537 PEX7O00628 323 aa14.24□□□□□ -0.13
CHFR-217ENST00000540537 RNASE3P12724 160 aaKnown RBP14.24□□□□□ -0.13
CHFR-217ENST00000540537 EVI2AP22794 236 aa14.24□□□□□ -0.13
CHFR-217ENST00000540537 FGF8P55075 233 aaPredicted RBP14.24□□□□□ -0.13
CHFR-217ENST00000540537 NHLRC2Q8NBF2 726 aa14.24□□□□□ -0.13
CHFR-217ENST00000540537 CYTL1Q9NRR1 136 aa14.24□□□□□ -0.13
CHFR-217ENST00000540537 ARL2-SNX15V9GYD0 113 aa14.24□□□□□ -0.13
CHFR-217ENST00000540537 ZNF506Q5JVG8 444 aa14.23□□□□□ -0.13
CHFR-217ENST00000540537 SLC25A29Q8N8R3 303 aa14.23□□□□□ -0.13
CHFR-217ENST00000540537 HIST1H2BAQ96A08 127 aa14.23□□□□□ -0.13
CHFR-217ENST00000540537 PRADC1Q9BSG0 188 aa14.23□□□□□ -0.13
CHFR-217ENST00000540537 TNFRSF18Q9Y5U5 241 aa14.23□□□□□ -0.13
CHFR-217ENST00000540537 TRBV6-4A0A1B0GX49 114 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 247.6 ms