RNA–Protein interactions for RNA: ENST00000540209.5

RAP1B-221, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-221ENST00000540209 TTC32Q5I0X7 151 aa13.35□□□□□ -0.27
RAP1B-221ENST00000540209 HHLA3Q9XRX5 114 aa13.35□□□□□ -0.27
RAP1B-221ENST00000540209 K7EQM0 130 aa13.34□□□□□ -0.27
RAP1B-221ENST00000540209 TYMSP04818 313 aa13.34□□□□□ -0.27
RAP1B-221ENST00000540209 TNP2Q05952 138 aa13.34□□□□□ -0.27
RAP1B-221ENST00000540209 IQCF2Q8IXL9 164 aa13.34□□□□□ -0.27
RAP1B-221ENST00000540209 ZNF479Q96JC4 524 aa13.34□□□□□ -0.27
RAP1B-221ENST00000540209 C8orf49Q96NF6 230 aa13.34□□□□□ -0.27
RAP1B-221ENST00000540209 NDFIP1Q9BT67 221 aa13.34□□□□□ -0.27
RAP1B-221ENST00000540209 EPDR1Q9UM22 224 aa13.34□□□□□ -0.27
RAP1B-221ENST00000540209 CTXND1A0A1B0GTU2 59 aa13.33□□□□□ -0.28
RAP1B-221ENST00000540209 A0A1W2PPQ1 181 aa13.33□□□□□ -0.28
RAP1B-221ENST00000540209 A0A1W2PRE2 83 aa13.33□□□□□ -0.28
RAP1B-221ENST00000540209 ARPC5O15511 151 aa13.33□□□□□ -0.28
RAP1B-221ENST00000540209 SFTA3P0C7M3 94 aa13.33□□□□□ -0.28
RAP1B-221ENST00000540209 ZNF80P51504 273 aaPredicted RBP13.33□□□□□ -0.28
RAP1B-221ENST00000540209 CYB561D1Q8N8Q1 229 aa13.33□□□□□ -0.28
RAP1B-221ENST00000540209 KCNS1Q96KK3 526 aa13.33□□□□□ -0.28
RAP1B-221ENST00000540209 SDF2L1Q9HCN8 221 aa13.33□□□□□ -0.28
RAP1B-221ENST00000540209 PSG8Q9UQ74 426 aa13.33□□□□□ -0.28
RAP1B-221ENST00000540209 TRGV4A0A0C4DH28 118 aa13.32□□□□□ -0.28
RAP1B-221ENST00000540209 M0R2P5 195 aa13.32□□□□□ -0.28
RAP1B-221ENST00000540209 TAAR5O14804 337 aa13.32□□□□□ -0.28
RAP1B-221ENST00000540209 FLI1Q01543 452 aaPredicted RBP13.32□□□□□ -0.28
RAP1B-221ENST00000540209 TMEM75Q8N9X5 138 aa13.32□□□□□ -0.28
RAP1B-221ENST00000540209 CYTL1Q9NRR1 136 aa13.32□□□□□ -0.28
RAP1B-221ENST00000540209 MED14OSP0DP75 135 aa13.31□□□□□ -0.28
RAP1B-221ENST00000540209 C11orf21Q9P2W6 132 aa13.31□□□□□ -0.28
RAP1B-221ENST00000540209 TRAV4A0A0B4J268 109 aa13.3□□□□□ -0.28
RAP1B-221ENST00000540209 FBLL1A6NHQ2 334 aaKnown RBP13.3□□□□□ -0.28
RAP1B-221ENST00000540209 GCGP01275 180 aa13.3□□□□□ -0.28
RAP1B-221ENST00000540209 PFN1P07737 140 aaKnown RBP13.3□□□□□ -0.28
RAP1B-221ENST00000540209 MRPL23Q16540 153 aaKnown RBP13.3□□□□□ -0.28
RAP1B-221ENST00000540209 SMLR1H3BR10 107 aa13.29□□□□□ -0.28
RAP1B-221ENST00000540209 K7EQD1 137 aa13.29□□□□□ -0.28
RAP1B-221ENST00000540209 ZFP69Q49AA0 526 aa13.29□□□□□ -0.28
RAP1B-221ENST00000540209 AKR1C8PQ5T2L2 129 aa13.29□□□□□ -0.28
RAP1B-221ENST00000540209 PRNTQ86SH4 94 aa13.29□□□□□ -0.28
RAP1B-221ENST00000540209 SIVA1O15304 175 aa13.28□□□□□ -0.28
RAP1B-221ENST00000540209 BTF3P20290 206 aaKnown RBP13.28□□□□□ -0.28
RAP1B-221ENST00000540209 FGF8P55075 233 aaPredicted RBP13.28□□□□□ -0.28
RAP1B-221ENST00000540209 SMUG1Q53HV7 270 aa13.28□□□□□ -0.28
RAP1B-221ENST00000540209 LYPD5Q6UWN5 251 aa13.28□□□□□ -0.28
RAP1B-221ENST00000540209 NEGR1Q7Z3B1 354 aa13.28□□□□□ -0.28
RAP1B-221ENST00000540209 ZNF575Q86XF7 245 aa13.28□□□□□ -0.28
RAP1B-221ENST00000540209 OR4C5Q8NGB2 326 aa13.28□□□□□ -0.28
RAP1B-221ENST00000540209 LINC00479Q96M42 142 aa13.28□□□□□ -0.28
RAP1B-221ENST00000540209 NXPH4O95158 308 aa13.27□□□□□ -0.29
RAP1B-221ENST00000540209 UBE2G2P60604 165 aa13.27□□□□□ -0.29
RAP1B-221ENST00000540209 ZNF345Q14585 488 aa13.27□□□□□ -0.29
RAP1B-221ENST00000540209 SAPCD1Q5SSQ6 148 aa13.27□□□□□ -0.29
RAP1B-221ENST00000540209 FAM74A7A6NL05 159 aa13.26□□□□□ -0.29
RAP1B-221ENST00000540209 ORM1P02763 201 aa13.26□□□□□ -0.29
RAP1B-221ENST00000540209 GYPEP15421 78 aa13.26□□□□□ -0.29
RAP1B-221ENST00000540209 SRIP30626 198 aa13.26□□□□□ -0.29
RAP1B-221ENST00000540209 C9orf85Q96MD7 179 aa13.26□□□□□ -0.29
RAP1B-221ENST00000540209 NKX6-2Q9C056 277 aaPredicted RBP13.26□□□□□ -0.29
RAP1B-221ENST00000540209 ARL2-SNX15V9GYD0 113 aa13.26□□□□□ -0.29
RAP1B-221ENST00000540209 LRP1BQ9NZR2 4599 aa13.26□□□□□ -0.29
RAP1B-221ENST00000540209 TRAV34A0A0B4J273 112 aa13.25□□□□□ -0.29
RAP1B-221ENST00000540209 MAP1LC3B2A6NCE7 125 aa13.25□□□□□ -0.29
RAP1B-221ENST00000540209 PEX7O00628 323 aa13.25□□□□□ -0.29
RAP1B-221ENST00000540209 IFNA7P01567 189 aa13.25□□□□□ -0.29
RAP1B-221ENST00000540209 KCNRGQ8N5I3 272 aa13.25□□□□□ -0.29
RAP1B-221ENST00000540209 PCNPQ8WW12 178 aaKnown RBP13.25□□□□□ -0.29
RAP1B-221ENST00000540209 MAP1LC3BQ9GZQ8 125 aa13.25□□□□□ -0.29
RAP1B-221ENST00000540209 C9JCJ5 164 aa13.24□□□□□ -0.29
RAP1B-221ENST00000540209 ZNF876PQ49A33 203 aa13.24□□□□□ -0.29
RAP1B-221ENST00000540209 Q86TA4 180 aa13.24□□□□□ -0.29
RAP1B-221ENST00000540209 HIST1H2BAQ96A08 127 aa13.24□□□□□ -0.29
RAP1B-221ENST00000540209 RNASE3P12724 160 aaKnown RBP13.23□□□□□ -0.29
RAP1B-221ENST00000540209 GATA1P15976 413 aaPredicted RBP13.23□□□□□ -0.29
RAP1B-221ENST00000540209 PPT1P50897 306 aa13.23□□□□□ -0.29
RAP1B-221ENST00000540209 LINC00315P59091 139 aa13.23□□□□□ -0.29
RAP1B-221ENST00000540209 DPPA3Q6W0C5 159 aa13.23□□□□□ -0.29
RAP1B-221ENST00000540209 OR11H4Q8NGC9 324 aa13.23□□□□□ -0.29
RAP1B-221ENST00000540209 PTH2Q96A98 100 aa13.23□□□□□ -0.29
RAP1B-221ENST00000540209 HMSDA8MTL9 139 aa13.22□□□□□ -0.29
RAP1B-221ENST00000540209 FHITP49789 147 aa13.22□□□□□ -0.29
RAP1B-221ENST00000540209 CFAP126Q5VTH2 177 aa13.22□□□□□ -0.29
RAP1B-221ENST00000540209 Q6ZRN7 208 aaPredicted RBP13.22□□□□□ -0.29
RAP1B-221ENST00000540209 TXNDC17Q9BRA2 123 aa13.22□□□□□ -0.29
RAP1B-221ENST00000540209 IGKV3D-20A0A0C4DH25 116 aa13.21□□□□□ -0.29
RAP1B-221ENST00000540209 LOC100131303A0A0U1RQF7 123 aa13.21□□□□□ -0.29
RAP1B-221ENST00000540209 RS1O15537 224 aa13.21□□□□□ -0.29
RAP1B-221ENST00000540209 ZNF506Q5JVG8 444 aa13.21□□□□□ -0.29
RAP1B-221ENST00000540209 HSPG2P98160 4391 aa13.21□□□□□ -0.3
RAP1B-221ENST00000540209 DNAH5Q8TE73 4624 aa13.2□□□□□ -0.3
RAP1B-221ENST00000540209 PGPEP1LA6NFU8 196 aa13.2□□□□□ -0.3
RAP1B-221ENST00000540209 FABP5P3A8MUU1 101 aa13.2□□□□□ -0.3
RAP1B-221ENST00000540209 C16orf90A8MZG2 172 aa13.2□□□□□ -0.3
RAP1B-221ENST00000540209 CIDEAO60543 219 aa13.2□□□□□ -0.3
RAP1B-221ENST00000540209 SEC11BP0C7V7 166 aa13.2□□□□□ -0.3
RAP1B-221ENST00000540209 COX8CQ7Z4L0 72 aa13.2□□□□□ -0.3
RAP1B-221ENST00000540209 WFDC10BQ8IUB3 73 aa13.2□□□□□ -0.3
RAP1B-221ENST00000540209 ABCA13Q86UQ4 5058 aa13.2□□□□□ -0.3
RAP1B-221ENST00000540209 A0A0D9SG52 128 aa13.19□□□□□ -0.3
RAP1B-221ENST00000540209 SLC25A29Q8N8R3 303 aa13.19□□□□□ -0.3
RAP1B-221ENST00000540209 STOML3Q8TAV4 291 aa13.19□□□□□ -0.3
RAP1B-221ENST00000540209 ZC2HC1AQ96GY0 325 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms