RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 CSTL1Q9H114 145 aa8.73□□□□□ -1.01
VTN-202ENST00000539746 NAGKQ9UJ70 344 aa8.73□□□□□ -1.01
VTN-202ENST00000539746 TEP1Q99973 2627 aaKnown RBP8.73□□□□□ -1.01
VTN-202ENST00000539746 ZFHX3Q15911 3703 aa8.72□□□□□ -1.01
VTN-202ENST00000539746 SETD2Q9BYW2 2564 aaPredicted RBP8.72□□□□□ -1.01
VTN-202ENST00000539746 A8MZ25 164 aa8.72□□□□□ -1.01
VTN-202ENST00000539746 IGKV3-20P01619 116 aa8.72□□□□□ -1.01
VTN-202ENST00000539746 ELOBQ15370 118 aa8.72□□□□□ -1.01
VTN-202ENST00000539746 SPINK13Q1W4C9 94 aa8.72□□□□□ -1.01
VTN-202ENST00000539746 ANXA2RQ3ZCQ2 193 aa8.72□□□□□ -1.01
VTN-202ENST00000539746 SPANXN1Q5VSR9 72 aa8.72□□□□□ -1.01
VTN-202ENST00000539746 GFI1BQ5VTD9 330 aa8.72□□□□□ -1.01
VTN-202ENST00000539746 AMTNQ6UX39 209 aa8.72□□□□□ -1.01
VTN-202ENST00000539746 ZFP82Q8N141 532 aa8.72□□□□□ -1.01
VTN-202ENST00000539746 GNB1LQ9BYB4 327 aa8.72□□□□□ -1.01
VTN-202ENST00000539746 SRD5A3Q9H8P0 318 aa8.72□□□□□ -1.01
VTN-202ENST00000539746 PHLDA3Q9Y5J5 127 aa8.72□□□□□ -1.01
VTN-202ENST00000539746 URGCP-MRPS24S4R325 110 aa8.72□□□□□ -1.01
VTN-202ENST00000539746 ATRQ13535 2644 aa8.72□□□□□ -1.01
VTN-202ENST00000539746 TRAV12-3A0A0B4J271 114 aa8.71□□□□□ -1.02
VTN-202ENST00000539746 TEX48A0A1B0GUV7 120 aa8.71□□□□□ -1.02
VTN-202ENST00000539746 CBY3A6NI87 242 aa8.71□□□□□ -1.02
VTN-202ENST00000539746 CIDEAO60543 219 aa8.71□□□□□ -1.02
VTN-202ENST00000539746 PPP1R17O96001 155 aa8.71□□□□□ -1.02
VTN-202ENST00000539746 S100A6P06703 90 aa8.71□□□□□ -1.02
VTN-202ENST00000539746 ZNF705DP0CH99 300 aaPredicted RBP8.71□□□□□ -1.02
VTN-202ENST00000539746 ZNF705BP0CI00 300 aaPredicted RBP8.71□□□□□ -1.02
VTN-202ENST00000539746 SMIM17P0DL12 118 aa8.71□□□□□ -1.02
VTN-202ENST00000539746 CTRLP40313 264 aa8.71□□□□□ -1.02
VTN-202ENST00000539746 LINC01587Q99440 93 aa8.71□□□□□ -1.02
VTN-202ENST00000539746 TP53TG3Q9ULZ0 132 aa8.71□□□□□ -1.02
VTN-202ENST00000539746 M0R2Z0 102 aa8.7□□□□□ -1.02
VTN-202ENST00000539746 CA1P00915 261 aaPredicted RBP8.7□□□□□ -1.02
VTN-202ENST00000539746 CD7P09564 240 aa8.7□□□□□ -1.02
VTN-202ENST00000539746 LURAP1LQ8IV03 231 aa8.7□□□□□ -1.02
VTN-202ENST00000539746 PTH2Q96A98 100 aa8.7□□□□□ -1.02
VTN-202ENST00000539746 C16orf74Q96GX8 76 aa8.7□□□□□ -1.02
VTN-202ENST00000539746 TPPP3Q9BW30 176 aa8.7□□□□□ -1.02
VTN-202ENST00000539746 CNFNQ9BYD5 112 aa8.7□□□□□ -1.02
VTN-202ENST00000539746 SNURFLB1AK76 121 aa8.69□□□□□ -1.02
VTN-202ENST00000539746 ZNF324O75467 553 aaPredicted RBP8.69□□□□□ -1.02
VTN-202ENST00000539746 PPBPP02775 128 aa8.69□□□□□ -1.02
VTN-202ENST00000539746 RPS10P46783 165 aaKnown RBP8.69□□□□□ -1.02
VTN-202ENST00000539746 CRIP1P50238 77 aa8.69□□□□□ -1.02
VTN-202ENST00000539746 RAB4BP61018 213 aa8.69□□□□□ -1.02
VTN-202ENST00000539746 GDF5OSQ5U4N7 250 aa8.69□□□□□ -1.02
VTN-202ENST00000539746 NUP35Q8NFH5 326 aa8.69□□□□□ -1.02
VTN-202ENST00000539746 AP1S3Q96PC3 154 aa8.69□□□□□ -1.02
VTN-202ENST00000539746 IGHV4-4A0A075B6R2 117 aa8.68□□□□□ -1.02
VTN-202ENST00000539746 J3KRW8 73 aa8.68□□□□□ -1.02
VTN-202ENST00000539746 SNAI2O43623 268 aa8.68□□□□□ -1.02
VTN-202ENST00000539746 ZNF80P51504 273 aaPredicted RBP8.68□□□□□ -1.02
VTN-202ENST00000539746 TCL1AP56279 114 aa8.68□□□□□ -1.02
VTN-202ENST00000539746 TWIST1Q15672 202 aa8.68□□□□□ -1.02
VTN-202ENST00000539746 DMRTA1Q5VZB9 504 aa8.68□□□□□ -1.02
VTN-202ENST00000539746 HIST2H2BDQ6DRA6 164 aa8.68□□□□□ -1.02
VTN-202ENST00000539746 Q6ZWC4 215 aa8.68□□□□□ -1.02
VTN-202ENST00000539746 TMEM263Q8WUH6 116 aaKnown RBP8.68□□□□□ -1.02
VTN-202ENST00000539746 PGLYRP4Q96LB8 373 aa8.68□□□□□ -1.02
VTN-202ENST00000539746 SSBP4Q9BWG4 385 aaPredicted RBP8.68□□□□□ -1.02
VTN-202ENST00000539746 C19orf73Q9NVV2 129 aa8.68□□□□□ -1.02
VTN-202ENST00000539746 TP53TG1Q9Y2A0 90 aa8.68□□□□□ -1.02
VTN-202ENST00000539746 TRAPPC1Q9Y5R8 145 aa8.68□□□□□ -1.02
VTN-202ENST00000539746 SELENOKQ9Y6D0 94 aa8.68□□□□□ -1.02
VTN-202ENST00000539746 TMSB15BA0A087X1C1 80 aa8.67□□□□□ -1.02
VTN-202ENST00000539746 C5orf52A6NGY3 159 aa8.67□□□□□ -1.02
VTN-202ENST00000539746 RHODO00212 210 aa8.67□□□□□ -1.02
VTN-202ENST00000539746 IGLC6P0CF74 106 aa8.67□□□□□ -1.02
VTN-202ENST00000539746 RRN3P1Q2M238 152 aa8.67□□□□□ -1.02
VTN-202ENST00000539746 DEFB125Q8N687 156 aa8.67□□□□□ -1.02
VTN-202ENST00000539746 XCL2Q9UBD3 114 aa8.67□□□□□ -1.02
VTN-202ENST00000539746 LAMTOR2Q9Y2Q5 125 aa8.67□□□□□ -1.02
VTN-202ENST00000539746 TRAV12-2A0A075B6T6 113 aa8.66□□□□□ -1.02
VTN-202ENST00000539746 A8MWV9 139 aa8.66□□□□□ -1.02
VTN-202ENST00000539746 APCSP02743 223 aa8.66□□□□□ -1.02
VTN-202ENST00000539746 ARMS2P0C7Q2 107 aa8.66□□□□□ -1.02
VTN-202ENST00000539746 LGALS9BQ3B8N2 356 aa8.66□□□□□ -1.02
VTN-202ENST00000539746 SAMD5Q5TGI4 173 aa8.66□□□□□ -1.02
VTN-202ENST00000539746 LYZL1Q6UWQ5 148 aa8.66□□□□□ -1.02
VTN-202ENST00000539746 LINC00322Q6ZN03 302 aaPredicted RBP8.66□□□□□ -1.02
VTN-202ENST00000539746 RCHY1Q96PM5 261 aa8.66□□□□□ -1.02
VTN-202ENST00000539746 TGIF2-C20orf24A0A0A6YYL0 155 aa8.65□□□□□ -1.02
VTN-202ENST00000539746 IGKV3D-20A0A0C4DH25 116 aa8.65□□□□□ -1.02
VTN-202ENST00000539746 H7C1H1 209 aa8.65□□□□□ -1.02
VTN-202ENST00000539746 M0R2P5 195 aa8.65□□□□□ -1.02
VTN-202ENST00000539746 RPL35AP18077 110 aaKnown RBP8.65□□□□□ -1.02
VTN-202ENST00000539746 MUC21Q5SSG8 566 aa8.65□□□□□ -1.02
VTN-202ENST00000539746 MRPL54Q6P161 138 aaKnown RBP8.65□□□□□ -1.02
VTN-202ENST00000539746 TMEM191AQ9H0A3 160 aa8.65□□□□□ -1.02
VTN-202ENST00000539746 CUBNO60494 3623 aa8.65□□□□□ -1.03
VTN-202ENST00000539746 H3BVH4 76 aa8.64□□□□□ -1.03
VTN-202ENST00000539746 CRXO43186 299 aaPredicted RBP8.64□□□□□ -1.03
VTN-202ENST00000539746 IGHV4-30-4P0DP06 118 aa8.64□□□□□ -1.03
VTN-202ENST00000539746 MIFP14174 115 aa8.64□□□□□ -1.03
VTN-202ENST00000539746 CAMPP49913 170 aa8.64□□□□□ -1.03
VTN-202ENST00000539746 FABP9Q0Z7S8 132 aa8.64□□□□□ -1.03
VTN-202ENST00000539746 Q8N1Y9 231 aa8.64□□□□□ -1.03
VTN-202ENST00000539746 GATD1Q8NB37 220 aa8.64□□□□□ -1.03
VTN-202ENST00000539746 GTSF1Q8WW33 167 aa8.64□□□□□ -1.03
VTN-202ENST00000539746 SCRT2Q9NQ03 307 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms