RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 WFDC10BQ8IUB3 73 aa12.13□□□□□ -0.47
PCF11-206ENST00000533018 OR10G9Q8NGN4 311 aa12.13□□□□□ -0.47
PCF11-206ENST00000533018 OR10G7Q8NGN6 311 aa12.13□□□□□ -0.47
PCF11-206ENST00000533018 TXNDC17Q9BRA2 123 aa12.13□□□□□ -0.47
PCF11-206ENST00000533018 TRAV8-1A0A0A6YYK1 113 aa12.12□□□□□ -0.47
PCF11-206ENST00000533018 TRAV4A0A0B4J268 109 aa12.12□□□□□ -0.47
PCF11-206ENST00000533018 GNG5P63218 68 aa12.12□□□□□ -0.47
PCF11-206ENST00000533018 TDRG1Q3Y452 100 aa12.12□□□□□ -0.47
PCF11-206ENST00000533018 SGK494Q96LW2 274 aa12.12□□□□□ -0.47
PCF11-206ENST00000533018 SDF2L1Q9HCN8 221 aa12.12□□□□□ -0.47
PCF11-206ENST00000533018 IGHV3-16A0A0C4DH30 117 aa12.11□□□□□ -0.47
PCF11-206ENST00000533018 NHLRC2Q8NBF2 726 aa12.11□□□□□ -0.47
PCF11-206ENST00000533018 MSRB1Q9NZV6 116 aa12.11□□□□□ -0.47
PCF11-206ENST00000533018 TYMSP04818 313 aa12.1□□□□□ -0.47
PCF11-206ENST00000533018 DNAH10OSP0CZ25 163 aa12.1□□□□□ -0.47
PCF11-206ENST00000533018 TVP23CQ96ET8 276 aa12.1□□□□□ -0.47
PCF11-206ENST00000533018 KCNS1Q96KK3 526 aa12.1□□□□□ -0.47
PCF11-206ENST00000533018 NDFIP1Q9BT67 221 aa12.1□□□□□ -0.47
PCF11-206ENST00000533018 LOC100131303A0A0U1RQF7 123 aa12.09□□□□□ -0.47
PCF11-206ENST00000533018 ARL14EPLP0DKL9 152 aa12.09□□□□□ -0.47
PCF11-206ENST00000533018 CDC34P49427 236 aaPredicted RBP12.09□□□□□ -0.47
PCF11-206ENST00000533018 ARL6IP6Q8N6S5 226 aa12.09□□□□□ -0.47
PCF11-206ENST00000533018 HSD17B11Q8NBQ5 300 aa12.09□□□□□ -0.47
PCF11-206ENST00000533018 ASB13Q8WXK3 278 aa12.09□□□□□ -0.47
PCF11-206ENST00000533018 K7EP13 123 aa12.08□□□□□ -0.48
PCF11-206ENST00000533018 CRYGDP07320 174 aa12.08□□□□□ -0.48
PCF11-206ENST00000533018 PPT1P50897 306 aa12.08□□□□□ -0.48
PCF11-206ENST00000533018 CDPF1Q6NVV7 123 aa12.08□□□□□ -0.48
PCF11-206ENST00000533018 A0A087WTM6 91 aa12.07□□□□□ -0.48
PCF11-206ENST00000533018 K7EQM0 130 aa12.07□□□□□ -0.48
PCF11-206ENST00000533018 SH2D6Q7Z4S9 175 aa12.07□□□□□ -0.48
PCF11-206ENST00000533018 SERTM2A0A1B0GWG4 89 aa12.06□□□□□ -0.48
PCF11-206ENST00000533018 FBLL1A6NHQ2 334 aaKnown RBP12.06□□□□□ -0.48
PCF11-206ENST00000533018 ZNF876PQ49A33 203 aa12.06□□□□□ -0.48
PCF11-206ENST00000533018 C10orf126Q8N4M7 172 aa12.06□□□□□ -0.48
PCF11-206ENST00000533018 ALG5Q9Y673 324 aa12.06□□□□□ -0.48
PCF11-206ENST00000533018 EPM2AB3EWF7 344 aa12.05□□□□□ -0.48
PCF11-206ENST00000533018 TCRAP04437 139 aa12.05□□□□□ -0.48
PCF11-206ENST00000533018 STAG3L2P0CL84 134 aa12.05□□□□□ -0.48
PCF11-206ENST00000533018 STAG3L3P0CL85 134 aa12.05□□□□□ -0.48
PCF11-206ENST00000533018 GATA1P15976 413 aaPredicted RBP12.05□□□□□ -0.48
PCF11-206ENST00000533018 ZFP69Q49AA0 526 aa12.05□□□□□ -0.48
PCF11-206ENST00000533018 C5orf17Q8NAS9 161 aa12.05□□□□□ -0.48
PCF11-206ENST00000533018 RAB24Q969Q5 203 aa12.05□□□□□ -0.48
PCF11-206ENST00000533018 IGHV3-73A0A0B4J1V6 119 aa12.04□□□□□ -0.48
PCF11-206ENST00000533018 IGHV3-38A0A0C4DH36 116 aa12.04□□□□□ -0.48
PCF11-206ENST00000533018 TAAR5O14804 337 aa12.04□□□□□ -0.48
PCF11-206ENST00000533018 PSCAO43653 123 aa12.04□□□□□ -0.48
PCF11-206ENST00000533018 GCGP01275 180 aa12.04□□□□□ -0.48
PCF11-206ENST00000533018 MBP02144 154 aa12.04□□□□□ -0.48
PCF11-206ENST00000533018 GCHFRP30047 84 aa12.04□□□□□ -0.48
PCF11-206ENST00000533018 OR2G3Q8NGZ4 309 aa12.04□□□□□ -0.48
PCF11-206ENST00000533018 PRADC1Q9BSG0 188 aa12.04□□□□□ -0.48
PCF11-206ENST00000533018 PSG8Q9UQ74 426 aa12.04□□□□□ -0.48
PCF11-206ENST00000533018 FAT1Q14517 4588 aa12.03□□□□□ -0.48
PCF11-206ENST00000533018 PFN1P07737 140 aaKnown RBP12.03□□□□□ -0.48
PCF11-206ENST00000533018 ATP6V0CP27449 155 aa12.03□□□□□ -0.48
PCF11-206ENST00000533018 ZNF80P51504 273 aaPredicted RBP12.03□□□□□ -0.48
PCF11-206ENST00000533018 SUMO1P63165 101 aaKnown RBP12.03□□□□□ -0.48
PCF11-206ENST00000533018 OR10J3Q5JRS4 329 aa12.03□□□□□ -0.48
PCF11-206ENST00000533018 PRNTQ86SH4 94 aa12.03□□□□□ -0.48
PCF11-206ENST00000533018 SLC25A29Q8N8R3 303 aa12.03□□□□□ -0.48
PCF11-206ENST00000533018 TRAV8-6A0A0B4J262 113 aa12.02□□□□□ -0.49
PCF11-206ENST00000533018 SMUG1Q53HV7 270 aa12.02□□□□□ -0.49
PCF11-206ENST00000533018 CFAP126Q5VTH2 177 aa12.02□□□□□ -0.49
PCF11-206ENST00000533018 TMEM75Q8N9X5 138 aa12.02□□□□□ -0.49
PCF11-206ENST00000533018 PSMG3Q9BT73 122 aaPredicted RBP12.02□□□□□ -0.49
PCF11-206ENST00000533018 ACTR3CQ9C0K3 210 aaPredicted RBP12.02□□□□□ -0.49
PCF11-206ENST00000533018 MED28Q9H204 178 aa12.02□□□□□ -0.49
PCF11-206ENST00000533018 TMEM167BQ9NRX6 74 aa12.02□□□□□ -0.49
PCF11-206ENST00000533018 C11orf21Q9P2W6 132 aa12.02□□□□□ -0.49
PCF11-206ENST00000533018 RS1O15537 224 aa12.01□□□□□ -0.49
PCF11-206ENST00000533018 CXorf1O96002 111 aa12.01□□□□□ -0.49
PCF11-206ENST00000533018 SERF2P84101 59 aa12.01□□□□□ -0.49
PCF11-206ENST00000533018 FLI1Q01543 452 aaPredicted RBP12.01□□□□□ -0.49
PCF11-206ENST00000533018 RHOHQ15669 191 aa12.01□□□□□ -0.49
PCF11-206ENST00000533018 DPPA3Q6W0C5 159 aa12.01□□□□□ -0.49
PCF11-206ENST00000533018 AQP10Q96PS8 301 aa12.01□□□□□ -0.49
PCF11-206ENST00000533018 SH3BGRL3Q9H299 93 aa12.01□□□□□ -0.49
PCF11-206ENST00000533018 EPDR1Q9UM22 224 aa12.01□□□□□ -0.49
PCF11-206ENST00000533018 CIDEAO60543 219 aa12□□□□□ -0.49
PCF11-206ENST00000533018 GCSHP23434 173 aa12□□□□□ -0.49
PCF11-206ENST00000533018 XGP55808 180 aa12□□□□□ -0.49
PCF11-206ENST00000533018 TIRAPP58753 221 aa12□□□□□ -0.49
PCF11-206ENST00000533018 KRTAP10-1P60331 282 aa12□□□□□ -0.49
PCF11-206ENST00000533018 CYB561D1Q8N8Q1 229 aa12□□□□□ -0.49
PCF11-206ENST00000533018 SUN5Q8TC36 379 aa12□□□□□ -0.49
PCF11-206ENST00000533018 Q9HAA7 133 aa12□□□□□ -0.49
PCF11-206ENST00000533018 TRBV6-4A0A1B0GX49 114 aa11.99□□□□□ -0.49
PCF11-206ENST00000533018 PGPEP1LA6NFU8 196 aa11.99□□□□□ -0.49
PCF11-206ENST00000533018 GGTLC3B5MD39 225 aa11.99□□□□□ -0.49
PCF11-206ENST00000533018 IGHV3-30P01768 117 aa11.99□□□□□ -0.49
PCF11-206ENST00000533018 IGHV3-33P01772 117 aa11.99□□□□□ -0.49
PCF11-206ENST00000533018 IGHV3-30-3P0DP02 117 aa11.99□□□□□ -0.49
PCF11-206ENST00000533018 IGHV3-30-5P0DP03 117 aa11.99□□□□□ -0.49
PCF11-206ENST00000533018 LINC01556Q5JQF7 62 aa11.99□□□□□ -0.49
PCF11-206ENST00000533018 ZNF506Q5JVG8 444 aa11.99□□□□□ -0.49
PCF11-206ENST00000533018 INO80EQ8NBZ0 244 aaPredicted RBP11.99□□□□□ -0.49
PCF11-206ENST00000533018 TNFSF18Q9UNG2 199 aa11.99□□□□□ -0.49
PCF11-206ENST00000533018 IGLV2-11P01706 119 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms