RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 K7EP13 123 aa11.43□□□□□ -0.58
CPSF1-207ENST00000531727 WFDC10BQ8IUB3 73 aa11.43□□□□□ -0.58
CPSF1-207ENST00000531727 OR4C5Q8NGB2 326 aa11.43□□□□□ -0.58
CPSF1-207ENST00000531727 OR10G9Q8NGN4 311 aa11.43□□□□□ -0.58
CPSF1-207ENST00000531727 OR10G7Q8NGN6 311 aa11.43□□□□□ -0.58
CPSF1-207ENST00000531727 TXNDC17Q9BRA2 123 aa11.43□□□□□ -0.58
CPSF1-207ENST00000531727 TREM1Q9NP99 234 aa11.43□□□□□ -0.58
CPSF1-207ENST00000531727 HMGB3O15347 200 aaKnown RBP11.42□□□□□ -0.58
CPSF1-207ENST00000531727 TYMSP04818 313 aa11.42□□□□□ -0.58
CPSF1-207ENST00000531727 GNG5P63218 68 aa11.42□□□□□ -0.58
CPSF1-207ENST00000531727 SDF2L1Q9HCN8 221 aa11.42□□□□□ -0.58
CPSF1-207ENST00000531727 BATF3Q9NR55 127 aa11.42□□□□□ -0.58
CPSF1-207ENST00000531727 DNAH10OSP0CZ25 163 aa11.41□□□□□ -0.58
CPSF1-207ENST00000531727 ARL14EPLP0DKL9 152 aa11.41□□□□□ -0.58
CPSF1-207ENST00000531727 EVI2AP22794 236 aa11.41□□□□□ -0.58
CPSF1-207ENST00000531727 CDPF1Q6NVV7 123 aa11.41□□□□□ -0.58
CPSF1-207ENST00000531727 KCNS1Q96KK3 526 aa11.41□□□□□ -0.58
CPSF1-207ENST00000531727 MSRB1Q9NZV6 116 aa11.41□□□□□ -0.58
CPSF1-207ENST00000531727 SERTM2A0A1B0GWG4 89 aa11.4□□□□□ -0.58
CPSF1-207ENST00000531727 FUSP35637 526 aaKnown RBP eCLIP11.4□□□□□ -0.58
CPSF1-207ENST00000531727 CDC34P49427 236 aaPredicted RBP11.4□□□□□ -0.58
CPSF1-207ENST00000531727 OR2G3Q8NGZ4 309 aa11.4□□□□□ -0.58
CPSF1-207ENST00000531727 A0A087WTM6 91 aa11.39□□□□□ -0.59
CPSF1-207ENST00000531727 LOC100131303A0A0U1RQF7 123 aa11.39□□□□□ -0.59
CPSF1-207ENST00000531727 STAG3L2P0CL84 134 aa11.39□□□□□ -0.59
CPSF1-207ENST00000531727 STAG3L3P0CL85 134 aa11.39□□□□□ -0.59
CPSF1-207ENST00000531727 GATA1P15976 413 aaPredicted RBP11.39□□□□□ -0.59
CPSF1-207ENST00000531727 SH2D6Q7Z4S9 175 aa11.39□□□□□ -0.59
CPSF1-207ENST00000531727 SUN5Q8TC36 379 aa11.39□□□□□ -0.59
CPSF1-207ENST00000531727 ASB13Q8WXK3 278 aa11.39□□□□□ -0.59
CPSF1-207ENST00000531727 NDFIP1Q9BT67 221 aa11.39□□□□□ -0.59
CPSF1-207ENST00000531727 ALG5Q9Y673 324 aa11.39□□□□□ -0.59
CPSF1-207ENST00000531727 TIRAPP58753 221 aa11.38□□□□□ -0.59
CPSF1-207ENST00000531727 C5orf17Q8NAS9 161 aa11.38□□□□□ -0.59
CPSF1-207ENST00000531727 HSD17B11Q8NBQ5 300 aa11.38□□□□□ -0.59
CPSF1-207ENST00000531727 SGK494Q96LW2 274 aa11.38□□□□□ -0.59
CPSF1-207ENST00000531727 TCRAP04437 139 aa11.37□□□□□ -0.59
CPSF1-207ENST00000531727 CRYGDP07320 174 aa11.37□□□□□ -0.59
CPSF1-207ENST00000531727 GCHFRP30047 84 aa11.37□□□□□ -0.59
CPSF1-207ENST00000531727 ZNF80P51504 273 aaPredicted RBP11.37□□□□□ -0.59
CPSF1-207ENST00000531727 C10orf126Q8N4M7 172 aa11.37□□□□□ -0.59
CPSF1-207ENST00000531727 NHLRC2Q8NBF2 726 aa11.37□□□□□ -0.59
CPSF1-207ENST00000531727 RAB24Q969Q5 203 aa11.37□□□□□ -0.59
CPSF1-207ENST00000531727 AQP10Q96PS8 301 aa11.37□□□□□ -0.59
CPSF1-207ENST00000531727 PSMG3Q9BT73 122 aaPredicted RBP11.37□□□□□ -0.59
CPSF1-207ENST00000531727 FBLL1A6NHQ2 334 aaKnown RBP11.36□□□□□ -0.59
CPSF1-207ENST00000531727 K7EQM0 130 aa11.36□□□□□ -0.59
CPSF1-207ENST00000531727 ATP6V0CP27449 155 aa11.36□□□□□ -0.59
CPSF1-207ENST00000531727 C11orf21Q9P2W6 132 aa11.36□□□□□ -0.59
CPSF1-207ENST00000531727 TAAR5O14804 337 aa11.35□□□□□ -0.59
CPSF1-207ENST00000531727 CIDEAO60543 219 aa11.35□□□□□ -0.59
CPSF1-207ENST00000531727 MBP02144 154 aa11.35□□□□□ -0.59
CPSF1-207ENST00000531727 PPT1P50897 306 aa11.35□□□□□ -0.59
CPSF1-207ENST00000531727 SERF2P84101 59 aa11.35□□□□□ -0.59
CPSF1-207ENST00000531727 ZNF876PQ49A33 203 aa11.35□□□□□ -0.59
CPSF1-207ENST00000531727 CFAP126Q5VTH2 177 aa11.35□□□□□ -0.59
CPSF1-207ENST00000531727 PSG8Q9UQ74 426 aa11.35□□□□□ -0.59
CPSF1-207ENST00000531727 IGHV3-38A0A0C4DH36 116 aa11.34□□□□□ -0.59
CPSF1-207ENST00000531727 GGTLC3B5MD39 225 aa11.34□□□□□ -0.59
CPSF1-207ENST00000531727 RS1O15537 224 aa11.34□□□□□ -0.59
CPSF1-207ENST00000531727 CXorf1O96002 111 aa11.34□□□□□ -0.59
CPSF1-207ENST00000531727 GCGP01275 180 aa11.34□□□□□ -0.59
CPSF1-207ENST00000531727 IGLV2-11P01706 119 aa11.34□□□□□ -0.59
CPSF1-207ENST00000531727 PFN1P07737 140 aaKnown RBP11.34□□□□□ -0.59
CPSF1-207ENST00000531727 XGP55808 180 aa11.34□□□□□ -0.59
CPSF1-207ENST00000531727 DPPA3Q6W0C5 159 aa11.34□□□□□ -0.59
CPSF1-207ENST00000531727 SLC25A29Q8N8R3 303 aa11.34□□□□□ -0.59
CPSF1-207ENST00000531727 C9orf85Q96MD7 179 aa11.34□□□□□ -0.59
CPSF1-207ENST00000531727 TMEM167BQ9NRX6 74 aa11.34□□□□□ -0.59
CPSF1-207ENST00000531727 EPDR1Q9UM22 224 aa11.34□□□□□ -0.59
CPSF1-207ENST00000531727 TRBV6-4A0A1B0GX49 114 aa11.33□□□□□ -0.6
CPSF1-207ENST00000531727 EPM2AB3EWF7 344 aa11.33□□□□□ -0.6
CPSF1-207ENST00000531727 SUMO1P63165 101 aaKnown RBP11.33□□□□□ -0.6
CPSF1-207ENST00000531727 FLI1Q01543 452 aaPredicted RBP11.33□□□□□ -0.6
CPSF1-207ENST00000531727 RHOHQ15669 191 aa11.33□□□□□ -0.6
CPSF1-207ENST00000531727 ZFP69Q49AA0 526 aa11.33□□□□□ -0.6
CPSF1-207ENST00000531727 SMUG1Q53HV7 270 aa11.33□□□□□ -0.6
CPSF1-207ENST00000531727 TMEM75Q8N9X5 138 aa11.33□□□□□ -0.6
CPSF1-207ENST00000531727 PTH2Q96A98 100 aa11.33□□□□□ -0.6
CPSF1-207ENST00000531727 PRADC1Q9BSG0 188 aa11.33□□□□□ -0.6
CPSF1-207ENST00000531727 MED28Q9H204 178 aa11.33□□□□□ -0.6
CPSF1-207ENST00000531727 SH3BGRL3Q9H299 93 aa11.33□□□□□ -0.6
CPSF1-207ENST00000531727 PTTG1O95997 202 aa11.32□□□□□ -0.6
CPSF1-207ENST00000531727 KRTAP10-1P60331 282 aa11.32□□□□□ -0.6
CPSF1-207ENST00000531727 LINC01556Q5JQF7 62 aa11.32□□□□□ -0.6
CPSF1-207ENST00000531727 PRNTQ86SH4 94 aa11.32□□□□□ -0.6
CPSF1-207ENST00000531727 CYB561D1Q8N8Q1 229 aa11.32□□□□□ -0.6
CPSF1-207ENST00000531727 ACTR3CQ9C0K3 210 aaPredicted RBP11.32□□□□□ -0.6
CPSF1-207ENST00000531727 TNFSF18Q9UNG2 199 aa11.32□□□□□ -0.6
CPSF1-207ENST00000531727 BOLA1Q9Y3E2 137 aa11.32□□□□□ -0.6
CPSF1-207ENST00000531727 IGHV3-73A0A0B4J1V6 119 aa11.31□□□□□ -0.6
CPSF1-207ENST00000531727 TRAV8-6A0A0B4J262 113 aa11.31□□□□□ -0.6
CPSF1-207ENST00000531727 PGPEP1LA6NFU8 196 aa11.31□□□□□ -0.6
CPSF1-207ENST00000531727 ZNF506Q5JVG8 444 aa11.31□□□□□ -0.6
CPSF1-207ENST00000531727 SAPCD1Q5SSQ6 148 aa11.31□□□□□ -0.6
CPSF1-207ENST00000531727 IBA57-AS1B1ANH7 110 aa11.3□□□□□ -0.6
CPSF1-207ENST00000531727 PSCAO43653 123 aa11.3□□□□□ -0.6
CPSF1-207ENST00000531727 RNASE3P12724 160 aaKnown RBP11.3□□□□□ -0.6
CPSF1-207ENST00000531727 Q5BKY6 102 aa11.3□□□□□ -0.6
CPSF1-207ENST00000531727 OR10J3Q5JRS4 329 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms