RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 NDFIP1Q9BT67 221 aa11.78□□□□□ -0.52
CCS-203ENST00000526058 IGHV3-16A0A0C4DH30 117 aa11.77□□□□□ -0.53
CCS-203ENST00000526058 NBDYA0A0U1RRE5 68 aa11.77□□□□□ -0.53
CCS-203ENST00000526058 HMSDA8MTL9 139 aa11.77□□□□□ -0.53
CCS-203ENST00000526058 TYMSP04818 313 aa11.77□□□□□ -0.53
CCS-203ENST00000526058 FHL2Q14192 279 aa11.77□□□□□ -0.53
CCS-203ENST00000526058 RASL10AQ92737 203 aa11.77□□□□□ -0.53
CCS-203ENST00000526058 C11orf21Q9P2W6 132 aa11.77□□□□□ -0.53
CCS-203ENST00000526058 DNAH11Q96DT5 4516 aa11.77□□□□□ -0.53
CCS-203ENST00000526058 TRAV34A0A0B4J273 112 aa11.76□□□□□ -0.53
CCS-203ENST00000526058 A0A1B0GVY2 172 aa11.76□□□□□ -0.53
CCS-203ENST00000526058 MAP1LC3B2A6NCE7 125 aa11.76□□□□□ -0.53
CCS-203ENST00000526058 FAM74A7A6NL05 159 aa11.76□□□□□ -0.53
CCS-203ENST00000526058 GCGP01275 180 aa11.76□□□□□ -0.53
CCS-203ENST00000526058 SFTA3P0C7M3 94 aa11.76□□□□□ -0.53
CCS-203ENST00000526058 FHITP49789 147 aa11.76□□□□□ -0.53
CCS-203ENST00000526058 TMEM75Q8N9X5 138 aa11.76□□□□□ -0.53
CCS-203ENST00000526058 ZNF479Q96JC4 524 aa11.76□□□□□ -0.53
CCS-203ENST00000526058 MAP1LC3BQ9GZQ8 125 aa11.76□□□□□ -0.53
CCS-203ENST00000526058 Q9H8V8 135 aa11.76□□□□□ -0.53
CCS-203ENST00000526058 SDF2L1Q9HCN8 221 aa11.76□□□□□ -0.53
CCS-203ENST00000526058 DYNC1H1Q14204 4646 aaKnown RBP11.75□□□□□ -0.53
CCS-203ENST00000526058 PAX4O43316 350 aa11.75□□□□□ -0.53
CCS-203ENST00000526058 IFNA7P01567 189 aa11.75□□□□□ -0.53
CCS-203ENST00000526058 CRYBA4P53673 196 aa11.75□□□□□ -0.53
CCS-203ENST00000526058 C1orf134Q5TEV5 83 aa11.75□□□□□ -0.53
CCS-203ENST00000526058 KCNS1Q96KK3 526 aa11.75□□□□□ -0.53
CCS-203ENST00000526058 PRO0255Q9UI72 69 aa11.75□□□□□ -0.53
CCS-203ENST00000526058 HHLA3Q9XRX5 114 aa11.75□□□□□ -0.53
CCS-203ENST00000526058 TRGV4A0A0C4DH28 118 aa11.73□□□□□ -0.53
CCS-203ENST00000526058 A0A0D9SG52 128 aa11.73□□□□□ -0.53
CCS-203ENST00000526058 FBLL1A6NHQ2 334 aaKnown RBP11.73□□□□□ -0.53
CCS-203ENST00000526058 M0R2P5 195 aa11.73□□□□□ -0.53
CCS-203ENST00000526058 PEX7O00628 323 aa11.73□□□□□ -0.53
CCS-203ENST00000526058 BCL2L11O43521 198 aa11.73□□□□□ -0.53
CCS-203ENST00000526058 PFN1P07737 140 aaKnown RBP11.73□□□□□ -0.53
CCS-203ENST00000526058 SMUG1Q53HV7 270 aa11.73□□□□□ -0.53
CCS-203ENST00000526058 UPK3BQ9BT76 320 aa11.73□□□□□ -0.53
CCS-203ENST00000526058 ZNF471Q9BX82 626 aaPredicted RBP11.73□□□□□ -0.53
CCS-203ENST00000526058 MRPS16Q9Y3D3 137 aaKnown RBP11.73□□□□□ -0.53
CCS-203ENST00000526058 ICOSQ9Y6W8 199 aa11.73□□□□□ -0.53
CCS-203ENST00000526058 KANTRA0A1W2PQU2 76 aa11.72□□□□□ -0.53
CCS-203ENST00000526058 SEC11BP0C7V7 166 aa11.72□□□□□ -0.53
CCS-203ENST00000526058 SLAQ13239 276 aa11.72□□□□□ -0.53
CCS-203ENST00000526058 ZFP69Q49AA0 526 aa11.72□□□□□ -0.53
CCS-203ENST00000526058 SOHLH1Q5JUK2 328 aa11.72□□□□□ -0.53
CCS-203ENST00000526058 SAPCD1Q5SSQ6 148 aa11.72□□□□□ -0.53
CCS-203ENST00000526058 NKX6-2Q9C056 277 aaPredicted RBP11.72□□□□□ -0.53
CCS-203ENST00000526058 ARL2-SNX15V9GYD0 113 aa11.72□□□□□ -0.53
CCS-203ENST00000526058 TRAV4A0A0B4J268 109 aa11.71□□□□□ -0.53
CCS-203ENST00000526058 HIST1H2BAQ96A08 127 aa11.71□□□□□ -0.53
CCS-203ENST00000526058 KRTAP1-5Q9BYS1 174 aa11.71□□□□□ -0.53
CCS-203ENST00000526058 KIAA1109Q2LD37 5005 aa11.7□□□□□ -0.54
CCS-203ENST00000526058 PPT1P50897 306 aa11.7□□□□□ -0.54
CCS-203ENST00000526058 TMUB2Q71RG4 321 aa11.7□□□□□ -0.54
CCS-203ENST00000526058 Q86TA4 180 aa11.7□□□□□ -0.54
CCS-203ENST00000526058 C6orf223Q8N319 242 aa11.7□□□□□ -0.54
CCS-203ENST00000526058 OR4C5Q8NGB2 326 aa11.7□□□□□ -0.54
CCS-203ENST00000526058 STOML3Q8TAV4 291 aa11.7□□□□□ -0.54
CCS-203ENST00000526058 FAM213BQ8TBF2 198 aa11.7□□□□□ -0.54
CCS-203ENST00000526058 HERC2O95714 4834 aa11.7□□□□□ -0.54
CCS-203ENST00000526058 A0A1B0GV50 99 aa11.69□□□□□ -0.54
CCS-203ENST00000526058 C9JCJ5 164 aa11.69□□□□□ -0.54
CCS-203ENST00000526058 MRPL23Q16540 153 aaKnown RBP11.69□□□□□ -0.54
CCS-203ENST00000526058 CST9LP1Q5W188 147 aa11.69□□□□□ -0.54
CCS-203ENST00000526058 SFT2D1Q8WV19 159 aa11.69□□□□□ -0.54
CCS-203ENST00000526058 MBD3L1Q8WWY6 194 aa11.69□□□□□ -0.54
CCS-203ENST00000526058 IGKV3D-20A0A0C4DH25 116 aa11.68□□□□□ -0.54
CCS-203ENST00000526058 UMAD1C9J7I0 102 aa11.68□□□□□ -0.54
CCS-203ENST00000526058 K7EQD1 137 aa11.68□□□□□ -0.54
CCS-203ENST00000526058 PFDN1O60925 122 aa11.68□□□□□ -0.54
CCS-203ENST00000526058 ZNF876PQ49A33 203 aa11.68□□□□□ -0.54
CCS-203ENST00000526058 LYPD5Q6UWN5 251 aa11.68□□□□□ -0.54
CCS-203ENST00000526058 DPPA3Q6W0C5 159 aa11.68□□□□□ -0.54
CCS-203ENST00000526058 C9orf85Q96MD7 179 aa11.68□□□□□ -0.54
CCS-203ENST00000526058 PAGE4O60829 102 aa11.67□□□□□ -0.54
CCS-203ENST00000526058 RNASE3P12724 160 aaKnown RBP11.67□□□□□ -0.54
CCS-203ENST00000526058 GYPEP15421 78 aa11.67□□□□□ -0.54
CCS-203ENST00000526058 CRIP1P50238 77 aa11.67□□□□□ -0.54
CCS-203ENST00000526058 ZC2HC1AQ96GY0 325 aa11.67□□□□□ -0.54
CCS-203ENST00000526058 PGPEP1LA6NFU8 196 aa11.66□□□□□ -0.54
CCS-203ENST00000526058 FABP5P3A8MUU1 101 aa11.66□□□□□ -0.54
CCS-203ENST00000526058 TNP2Q05952 138 aa11.66□□□□□ -0.54
CCS-203ENST00000526058 NEGR1Q7Z3B1 354 aa11.66□□□□□ -0.54
CCS-203ENST00000526058 FMC1Q96HJ9 113 aa11.66□□□□□ -0.54
CCS-203ENST00000526058 LOC100131303A0A0U1RQF7 123 aa11.65□□□□□ -0.54
CCS-203ENST00000526058 SIVA1O15304 175 aa11.65□□□□□ -0.54
CCS-203ENST00000526058 RS1O15537 224 aa11.65□□□□□ -0.54
CCS-203ENST00000526058 NXPH4O95158 308 aa11.65□□□□□ -0.54
CCS-203ENST00000526058 TPT1P13693 172 aaKnown RBP11.65□□□□□ -0.54
CCS-203ENST00000526058 GATA1P15976 413 aaPredicted RBP11.65□□□□□ -0.54
CCS-203ENST00000526058 SRIP30626 198 aa11.65□□□□□ -0.54
CCS-203ENST00000526058 UBE2G1P62253 170 aa11.65□□□□□ -0.54
CCS-203ENST00000526058 EIF5AP63241 154 aaKnown RBP11.65□□□□□ -0.54
CCS-203ENST00000526058 LGALSLQ3ZCW2 172 aaPredicted RBP11.65□□□□□ -0.54
CCS-203ENST00000526058 TTC32Q5I0X7 151 aa11.65□□□□□ -0.54
CCS-203ENST00000526058 ZNF506Q5JVG8 444 aa11.65□□□□□ -0.54
CCS-203ENST00000526058 CFAP126Q5VTH2 177 aa11.65□□□□□ -0.54
CCS-203ENST00000526058 ZFP30Q9Y2G7 519 aa11.65□□□□□ -0.54
CCS-203ENST00000526058 A0A1W2PPQ1 181 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms