RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 PSG8Q9UQ74 426 aa12.23□□□□□ -0.45
NR1H3-228ENST00000525441 DNAH10Q8IVF4 4471 aa12.23□□□□□ -0.45
NR1H3-228ENST00000525441 FLI1Q01543 452 aaPredicted RBP12.22□□□□□ -0.45
NR1H3-228ENST00000525441 KCNS1Q96KK3 526 aa12.22□□□□□ -0.45
NR1H3-228ENST00000525441 SGK494Q96LW2 274 aa12.22□□□□□ -0.45
NR1H3-228ENST00000525441 NKX6-2Q9C056 277 aaPredicted RBP12.22□□□□□ -0.45
NR1H3-228ENST00000525441 MDFICQ9P1T7 246 aa12.22□□□□□ -0.45
NR1H3-228ENST00000525441 MUC4Q99102 2169 aa12.21□□□□□ -0.45
NR1H3-228ENST00000525441 MAP1LC3B2A6NCE7 125 aa12.21□□□□□ -0.45
NR1H3-228ENST00000525441 IFNA7P01567 189 aa12.21□□□□□ -0.45
NR1H3-228ENST00000525441 SLAQ13239 276 aa12.21□□□□□ -0.45
NR1H3-228ENST00000525441 Q6ZR54 194 aa12.21□□□□□ -0.45
NR1H3-228ENST00000525441 TMEM75Q8N9X5 138 aa12.21□□□□□ -0.45
NR1H3-228ENST00000525441 MAP1LC3BQ9GZQ8 125 aa12.21□□□□□ -0.45
NR1H3-228ENST00000525441 SDF2L1Q9HCN8 221 aa12.21□□□□□ -0.45
NR1H3-228ENST00000525441 FHITP49789 147 aa12.2□□□□□ -0.46
NR1H3-228ENST00000525441 PPT1P50897 306 aa12.2□□□□□ -0.46
NR1H3-228ENST00000525441 FGF8P55075 233 aaPredicted RBP12.2□□□□□ -0.46
NR1H3-228ENST00000525441 UBE2G2P60604 165 aa12.2□□□□□ -0.46
NR1H3-228ENST00000525441 SOHLH1Q5JUK2 328 aa12.2□□□□□ -0.46
NR1H3-228ENST00000525441 SAPCD1Q5SSQ6 148 aa12.2□□□□□ -0.46
NR1H3-228ENST00000525441 PRNTQ86SH4 94 aa12.2□□□□□ -0.46
NR1H3-228ENST00000525441 FAM213BQ8TBF2 198 aa12.2□□□□□ -0.46
NR1H3-228ENST00000525441 LINC00588Q9Y4M8 146 aa12.2□□□□□ -0.46
NR1H3-228ENST00000525441 NACAE9PAV3 2078 aa12.2□□□□□ -0.46
NR1H3-228ENST00000525441 IGHV3-53P01767 116 aa12.19□□□□□ -0.46
NR1H3-228ENST00000525441 SMUG1Q53HV7 270 aa12.19□□□□□ -0.46
NR1H3-228ENST00000525441 ZNRF2Q8NHG8 242 aa12.19□□□□□ -0.46
NR1H3-228ENST00000525441 MBD3L1Q8WWY6 194 aa12.19□□□□□ -0.46
NR1H3-228ENST00000525441 RASL10AQ92737 203 aa12.19□□□□□ -0.46
NR1H3-228ENST00000525441 IGHV3-16A0A0C4DH30 117 aa12.18□□□□□ -0.46
NR1H3-228ENST00000525441 FAM74A7A6NL05 159 aa12.18□□□□□ -0.46
NR1H3-228ENST00000525441 PAX4O43316 350 aa12.18□□□□□ -0.46
NR1H3-228ENST00000525441 GNRH2O43555 120 aa12.18□□□□□ -0.46
NR1H3-228ENST00000525441 GCGP01275 180 aa12.18□□□□□ -0.46
NR1H3-228ENST00000525441 IGLV2-11P01706 119 aa12.18□□□□□ -0.46
NR1H3-228ENST00000525441 IFITM2Q01629 132 aa12.18□□□□□ -0.46
NR1H3-228ENST00000525441 HIST1H2BAQ96A08 127 aa12.18□□□□□ -0.46
NR1H3-228ENST00000525441 VSIG2Q96IQ7 327 aa12.18□□□□□ -0.46
NR1H3-228ENST00000525441 C8orf49Q96NF6 230 aa12.18□□□□□ -0.46
NR1H3-228ENST00000525441 PRO0255Q9UI72 69 aa12.18□□□□□ -0.46
NR1H3-228ENST00000525441 M0R2P5 195 aa12.17□□□□□ -0.46
NR1H3-228ENST00000525441 PEX7O00628 323 aa12.17□□□□□ -0.46
NR1H3-228ENST00000525441 TYMSP04818 313 aa12.17□□□□□ -0.46
NR1H3-228ENST00000525441 PFN1P07737 140 aaKnown RBP12.17□□□□□ -0.46
NR1H3-228ENST00000525441 TRAV1-1A0A0B4J248 108 aa12.16□□□□□ -0.46
NR1H3-228ENST00000525441 TRGV4A0A0C4DH28 118 aa12.16□□□□□ -0.46
NR1H3-228ENST00000525441 H2AFB1P0C5Y9 115 aa12.16□□□□□ -0.46
NR1H3-228ENST00000525441 C1orf134Q5TEV5 83 aa12.16□□□□□ -0.46
NR1H3-228ENST00000525441 TCEAL7Q9BRU2 100 aa12.16□□□□□ -0.46
NR1H3-228ENST00000525441 HHLA3Q9XRX5 114 aa12.16□□□□□ -0.46
NR1H3-228ENST00000525441 ICOSQ9Y6W8 199 aa12.16□□□□□ -0.46
NR1H3-228ENST00000525441 FRAS1Q86XX4 4008 aa12.15□□□□□ -0.46
NR1H3-228ENST00000525441 A0A096LPF7 62 aa12.15□□□□□ -0.46
NR1H3-228ENST00000525441 TRAV34A0A0B4J273 112 aa12.15□□□□□ -0.46
NR1H3-228ENST00000525441 NBDYA0A0U1RRE5 68 aa12.15□□□□□ -0.46
NR1H3-228ENST00000525441 RTL8CO15255 209 aa12.15□□□□□ -0.46
NR1H3-228ENST00000525441 ZNF80P51504 273 aaPredicted RBP12.15□□□□□ -0.46
NR1H3-228ENST00000525441 BLOC1S1P78537 153 aa12.15□□□□□ -0.46
NR1H3-228ENST00000525441 FHL2Q14192 279 aa12.15□□□□□ -0.46
NR1H3-228ENST00000525441 ESRGQ1W209 222 aa12.15□□□□□ -0.46
NR1H3-228ENST00000525441 SFT2D1Q8WV19 159 aa12.15□□□□□ -0.46
NR1H3-228ENST00000525441 ARL2-SNX15V9GYD0 113 aa12.15□□□□□ -0.46
NR1H3-228ENST00000525441 TRAV4A0A0B4J268 109 aa12.14□□□□□ -0.47
NR1H3-228ENST00000525441 PRSS29PA6NIE9 313 aa12.14□□□□□ -0.47
NR1H3-228ENST00000525441 CRYBA4P53673 196 aa12.14□□□□□ -0.47
NR1H3-228ENST00000525441 CST9LP1Q5W188 147 aa12.14□□□□□ -0.47
NR1H3-228ENST00000525441 LINC00479Q96M42 142 aa12.14□□□□□ -0.47
NR1H3-228ENST00000525441 UPK3BQ9BT76 320 aa12.14□□□□□ -0.47
NR1H3-228ENST00000525441 Q9H8V8 135 aa12.14□□□□□ -0.47
NR1H3-228ENST00000525441 MRPS16Q9Y3D3 137 aaKnown RBP12.14□□□□□ -0.47
NR1H3-228ENST00000525441 SFTA3P0C7M3 94 aa12.13□□□□□ -0.47
NR1H3-228ENST00000525441 MRPL23Q16540 153 aaKnown RBP12.13□□□□□ -0.47
NR1H3-228ENST00000525441 Q86TA4 180 aa12.13□□□□□ -0.47
NR1H3-228ENST00000525441 OR4C5Q8NGB2 326 aa12.13□□□□□ -0.47
NR1H3-228ENST00000525441 LYPD6BQ8NI32 183 aa12.13□□□□□ -0.47
NR1H3-228ENST00000525441 ZNF479Q96JC4 524 aa12.13□□□□□ -0.47
NR1H3-228ENST00000525441 TEX46H3BTG2 121 aa12.12□□□□□ -0.47
NR1H3-228ENST00000525441 UBE2G1P62253 170 aa12.12□□□□□ -0.47
NR1H3-228ENST00000525441 TTC32Q5I0X7 151 aa12.12□□□□□ -0.47
NR1H3-228ENST00000525441 PCNPQ8WW12 178 aaKnown RBP12.12□□□□□ -0.47
NR1H3-228ENST00000525441 FMC1Q96HJ9 113 aa12.12□□□□□ -0.47
NR1H3-228ENST00000525441 C11orf21Q9P2W6 132 aa12.12□□□□□ -0.47
NR1H3-228ENST00000525441 ZFP30Q9Y2G7 519 aa12.12□□□□□ -0.47
NR1H3-228ENST00000525441 FABP5P3A8MUU1 101 aa12.11□□□□□ -0.47
NR1H3-228ENST00000525441 ORM1P02763 201 aa12.11□□□□□ -0.47
NR1H3-228ENST00000525441 C9JCJ5 164 aa12.1□□□□□ -0.47
NR1H3-228ENST00000525441 PAGE4O60829 102 aa12.1□□□□□ -0.47
NR1H3-228ENST00000525441 ZNF876PQ49A33 203 aa12.1□□□□□ -0.47
NR1H3-228ENST00000525441 TRBV6-1A0A0K0K1D8 114 aa12.09□□□□□ -0.47
NR1H3-228ENST00000525441 SRIP30626 198 aa12.09□□□□□ -0.47
NR1H3-228ENST00000525441 AKR1C3P42330 323 aa12.09□□□□□ -0.47
NR1H3-228ENST00000525441 CCL20P78556 96 aa12.09□□□□□ -0.47
NR1H3-228ENST00000525441 NEGR1Q7Z3B1 354 aa12.09□□□□□ -0.47
NR1H3-228ENST00000525441 C6orf223Q8N319 242 aa12.09□□□□□ -0.47
NR1H3-228ENST00000525441 C9orf85Q96MD7 179 aa12.09□□□□□ -0.47
NR1H3-228ENST00000525441 A0A1B0GV50 99 aa12.08□□□□□ -0.48
NR1H3-228ENST00000525441 A0A1W2PPQ1 181 aa12.08□□□□□ -0.48
NR1H3-228ENST00000525441 CIDEAO60543 219 aa12.08□□□□□ -0.48
NR1H3-228ENST00000525441 S100A4P26447 101 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms