RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 TRGV11A0A075B6L2 103 aa9.07□□□□□ -0.96
VEGFA-224ENST00000523873 TRGV1A0A0A0MS02 117 aa9.07□□□□□ -0.96
VEGFA-224ENST00000523873 IGHV3-16A0A0C4DH30 117 aa9.07□□□□□ -0.96
VEGFA-224ENST00000523873 TRBV6-1A0A0K0K1D8 114 aa9.07□□□□□ -0.96
VEGFA-224ENST00000523873 PFN1P07737 140 aaKnown RBP9.07□□□□□ -0.96
VEGFA-224ENST00000523873 MEF2BQ02080 365 aaPredicted RBP9.07□□□□□ -0.96
VEGFA-224ENST00000523873 ZNF415Q09FC8 603 aa9.07□□□□□ -0.96
VEGFA-224ENST00000523873 DAZ2Q13117 558 aaKnown RBP9.07□□□□□ -0.96
VEGFA-224ENST00000523873 IBA57Q5T440 356 aaKnown RBP9.07□□□□□ -0.96
VEGFA-224ENST00000523873 LINC00612Q8N6U2 182 aa9.07□□□□□ -0.96
VEGFA-224ENST00000523873 C11orf52Q96A22 123 aa9.07□□□□□ -0.96
VEGFA-224ENST00000523873 SDF2L1Q9HCN8 221 aa9.07□□□□□ -0.96
VEGFA-224ENST00000523873 ZFP30Q9Y2G7 519 aa9.07□□□□□ -0.96
VEGFA-224ENST00000523873 IGHV4-4A0A075B6R2 117 aa9.06□□□□□ -0.96
VEGFA-224ENST00000523873 SPINK4O60575 86 aa9.06□□□□□ -0.96
VEGFA-224ENST00000523873 SH2D1AO60880 128 aa9.06□□□□□ -0.96
VEGFA-224ENST00000523873 RPL35P42766 123 aaKnown RBP9.06□□□□□ -0.96
VEGFA-224ENST00000523873 TDRG1Q3Y452 100 aa9.06□□□□□ -0.96
VEGFA-224ENST00000523873 TEX261Q6UWH6 196 aa9.06□□□□□ -0.96
VEGFA-224ENST00000523873 LYPD6BQ8NI32 183 aa9.06□□□□□ -0.96
VEGFA-224ENST00000523873 VAX2Q9UIW0 290 aa9.06□□□□□ -0.96
VEGFA-224ENST00000523873 ALMS1Q8TCU4 4167 aa9.05□□□□□ -0.96
VEGFA-224ENST00000523873 IGKV3D-20A0A0C4DH25 116 aa9.05□□□□□ -0.96
VEGFA-224ENST00000523873 RAB19A4D1S5 217 aa9.05□□□□□ -0.96
VEGFA-224ENST00000523873 F5H768 121 aa9.05□□□□□ -0.96
VEGFA-224ENST00000523873 BAGE2Q86Y30 109 aa9.05□□□□□ -0.96
VEGFA-224ENST00000523873 MED9Q9NWA0 146 aa9.05□□□□□ -0.96
VEGFA-224ENST00000523873 APLNQ9ULZ1 77 aa9.05□□□□□ -0.96
VEGFA-224ENST00000523873 HYDINQ4G0P3 5121 aa9.05□□□□□ -0.96
VEGFA-224ENST00000523873 KMT2CQ8NEZ4 4911 aaKnown RBP9.04□□□□□ -0.96
VEGFA-224ENST00000523873 RBFOX3A6NFN3 312 aa9.04□□□□□ -0.96
VEGFA-224ENST00000523873 FABP5P3A8MUU1 101 aa9.04□□□□□ -0.96
VEGFA-224ENST00000523873 M0R036 132 aa9.04□□□□□ -0.96
VEGFA-224ENST00000523873 ATP5G1P05496 136 aa9.04□□□□□ -0.96
VEGFA-224ENST00000523873 S100A9P06702 114 aaKnown RBP9.04□□□□□ -0.96
VEGFA-224ENST00000523873 CENPWQ5EE01 88 aa9.04□□□□□ -0.96
VEGFA-224ENST00000523873 TOR2AQ5JU69 321 aa9.04□□□□□ -0.96
VEGFA-224ENST00000523873 COX8CQ7Z4L0 72 aa9.04□□□□□ -0.96
VEGFA-224ENST00000523873 KCNS1Q96KK3 526 aa9.04□□□□□ -0.96
VEGFA-224ENST00000523873 TXNDC17Q9BRA2 123 aa9.04□□□□□ -0.96
VEGFA-224ENST00000523873 TRGV2A0A075B6R0 118 aa9.03□□□□□ -0.96
VEGFA-224ENST00000523873 TMSB15BA0A087X1C1 80 aa9.03□□□□□ -0.96
VEGFA-224ENST00000523873 LCE6AA0A183 80 aa9.03□□□□□ -0.96
VEGFA-224ENST00000523873 GRIFINA4D1Z8 144 aa9.03□□□□□ -0.96
VEGFA-224ENST00000523873 PGPEP1LA6NFU8 196 aa9.03□□□□□ -0.96
VEGFA-224ENST00000523873 PDE6DO43924 150 aa9.03□□□□□ -0.96
VEGFA-224ENST00000523873 IGHV3-53P01767 116 aa9.03□□□□□ -0.96
VEGFA-224ENST00000523873 ORM1P02763 201 aa9.03□□□□□ -0.96
VEGFA-224ENST00000523873 HOXA5P20719 270 aa9.03□□□□□ -0.96
VEGFA-224ENST00000523873 ZNF674Q2M3X9 581 aa9.03□□□□□ -0.96
VEGFA-224ENST00000523873 ZNF506Q5JVG8 444 aa9.03□□□□□ -0.96
VEGFA-224ENST00000523873 FAM162BQ5T6X4 162 aa9.03□□□□□ -0.96
VEGFA-224ENST00000523873 PRR27Q6MZM9 219 aa9.03□□□□□ -0.96
VEGFA-224ENST00000523873 TMEM88Q6PEY1 159 aa9.03□□□□□ -0.96
VEGFA-224ENST00000523873 MLST8Q9BVC4 326 aa9.03□□□□□ -0.96
VEGFA-224ENST00000523873 RYR2Q92736 4967 aa9.03□□□□□ -0.96
VEGFA-224ENST00000523873 B4DEV8 164 aa9.02□□□□□ -0.97
VEGFA-224ENST00000523873 IGLV2-8P01709 118 aa9.02□□□□□ -0.97
VEGFA-224ENST00000523873 RNASE3P12724 160 aaKnown RBP9.02□□□□□ -0.97
VEGFA-224ENST00000523873 RPL19P84098 196 aaKnown RBP9.02□□□□□ -0.97
VEGFA-224ENST00000523873 TRBV20OR9-2A0A075B6H5 130 aa9.01□□□□□ -0.97
VEGFA-224ENST00000523873 KRBOX1C9JBD0 128 aa9.01□□□□□ -0.97
VEGFA-224ENST00000523873 MGST1P10620 155 aaKnown RBP9.01□□□□□ -0.97
VEGFA-224ENST00000523873 TAGLN2P37802 199 aaKnown RBP9.01□□□□□ -0.97
VEGFA-224ENST00000523873 OR5I1Q13606 314 aa9.01□□□□□ -0.97
VEGFA-224ENST00000523873 LGALS9BQ3B8N2 356 aa9.01□□□□□ -0.97
VEGFA-224ENST00000523873 LINC00476Q8WZB0 136 aa9.01□□□□□ -0.97
VEGFA-224ENST00000523873 C9orf85Q96MD7 179 aa9.01□□□□□ -0.97
VEGFA-224ENST00000523873 SPXQ9BT56 116 aa9.01□□□□□ -0.97
VEGFA-224ENST00000523873 NDUFAF3Q9BU61 184 aa9.01□□□□□ -0.97
VEGFA-224ENST00000523873 SACSQ9NZJ4 4579 aa9.01□□□□□ -0.97
VEGFA-224ENST00000523873 TENM2Q9NT68 2774 aa9□□□□□ -0.97
VEGFA-224ENST00000523873 A0A0J9YY99 117 aa9□□□□□ -0.97
VEGFA-224ENST00000523873 C9JCJ5 164 aa9□□□□□ -0.97
VEGFA-224ENST00000523873 M0R2P5 195 aa9□□□□□ -0.97
VEGFA-224ENST00000523873 LY6G6CO95867 125 aa9□□□□□ -0.97
VEGFA-224ENST00000523873 SFTA3P0C7M3 94 aa9□□□□□ -0.97
VEGFA-224ENST00000523873 GNG4P50150 75 aa9□□□□□ -0.97
VEGFA-224ENST00000523873 CEBPGP53567 150 aa9□□□□□ -0.97
VEGFA-224ENST00000523873 ZNF575Q86XF7 245 aa9□□□□□ -0.97
VEGFA-224ENST00000523873 POM121L12Q8N7R1 296 aa9□□□□□ -0.97
VEGFA-224ENST00000523873 FAM210AQ96ND0 272 aa9□□□□□ -0.97
VEGFA-224ENST00000523873 LYSTQ99698 3801 aa9□□□□□ -0.97
VEGFA-224ENST00000523873 EIF5A2Q9GZV4 153 aaKnown RBP9□□□□□ -0.97
VEGFA-224ENST00000523873 PARLQ9H300 379 aa9□□□□□ -0.97
VEGFA-224ENST00000523873 DNAH1Q9P2D7 4330 aa9□□□□□ -0.97
VEGFA-224ENST00000523873 H3BVH4 76 aa8.99□□□□□ -0.97
VEGFA-224ENST00000523873 S100A4P26447 101 aaKnown RBP8.99□□□□□ -0.97
VEGFA-224ENST00000523873 ASIPP42127 132 aa8.99□□□□□ -0.97
VEGFA-224ENST00000523873 LINC01559Q495D7 138 aa8.99□□□□□ -0.97
VEGFA-224ENST00000523873 RASL10AQ92737 203 aa8.99□□□□□ -0.97
VEGFA-224ENST00000523873 ZNF479Q96JC4 524 aa8.99□□□□□ -0.97
VEGFA-224ENST00000523873 C18orf15Q96N68 181 aa8.99□□□□□ -0.97
VEGFA-224ENST00000523873 TRAV26-1A0A087WT03 109 aa8.98□□□□□ -0.97
VEGFA-224ENST00000523873 SRP19P09132 144 aaKnown RBP8.98□□□□□ -0.97
VEGFA-224ENST00000523873 TCTAP57738 103 aa8.98□□□□□ -0.97
VEGFA-224ENST00000523873 SRSF3P84103 164 aaKnown RBP8.98□□□□□ -0.97
VEGFA-224ENST00000523873 RYR3Q15413 4870 aa8.97□□□□□ -0.97
VEGFA-224ENST00000523873 TMEM250H0YL14 139 aa8.97□□□□□ -0.97
VEGFA-224ENST00000523873 NUDT3O95989 172 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms