RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 GAGE12IP0CL82 117 aa8.41□□□□□ -1.06
HPS4-218ENST00000519774 TCL1AP56279 114 aa8.41□□□□□ -1.06
HPS4-218ENST00000519774 MEF2BQ02080 365 aaPredicted RBP8.41□□□□□ -1.06
HPS4-218ENST00000519774 IBA57Q5T440 356 aaKnown RBP8.41□□□□□ -1.06
HPS4-218ENST00000519774 NHLRC2Q8NBF2 726 aa8.41□□□□□ -1.06
HPS4-218ENST00000519774 ZC2HC1AQ96GY0 325 aa8.41□□□□□ -1.06
HPS4-218ENST00000519774 SDF2L1Q9HCN8 221 aa8.41□□□□□ -1.06
HPS4-218ENST00000519774 ZFP30Q9Y2G7 519 aa8.41□□□□□ -1.06
HPS4-218ENST00000519774 CSMD3Q7Z407 3707 aa8.41□□□□□ -1.06
HPS4-218ENST00000519774 TRGV1A0A0A0MS02 117 aa8.4□□□□□ -1.06
HPS4-218ENST00000519774 TRBV6-1A0A0K0K1D8 114 aa8.4□□□□□ -1.06
HPS4-218ENST00000519774 GNRH2O43555 120 aa8.4□□□□□ -1.06
HPS4-218ENST00000519774 LTAP01374 205 aa8.4□□□□□ -1.06
HPS4-218ENST00000519774 S100A9P06702 114 aaKnown RBP8.4□□□□□ -1.06
HPS4-218ENST00000519774 DAZ2Q13117 558 aaKnown RBP8.4□□□□□ -1.06
HPS4-218ENST00000519774 Q6ZTI0 123 aa8.4□□□□□ -1.06
HPS4-218ENST00000519774 C11orf52Q96A22 123 aa8.4□□□□□ -1.06
HPS4-218ENST00000519774 KCNS1Q96KK3 526 aa8.4□□□□□ -1.06
HPS4-218ENST00000519774 TXNDC17Q9BRA2 123 aa8.4□□□□□ -1.06
HPS4-218ENST00000519774 DERL1Q9BUN8 251 aa8.4□□□□□ -1.06
HPS4-218ENST00000519774 MRPL16Q9NX20 251 aaKnown RBP8.4□□□□□ -1.06
HPS4-218ENST00000519774 MDFICQ9P1T7 246 aa8.4□□□□□ -1.06
HPS4-218ENST00000519774 C11orf21Q9P2W6 132 aa8.4□□□□□ -1.06
HPS4-218ENST00000519774 VAX2Q9UIW0 290 aa8.4□□□□□ -1.06
HPS4-218ENST00000519774 TENM2Q9NT68 2774 aa8.4□□□□□ -1.06
HPS4-218ENST00000519774 TYMSP04818 313 aa8.39□□□□□ -1.07
HPS4-218ENST00000519774 ATP5G1P05496 136 aa8.39□□□□□ -1.07
HPS4-218ENST00000519774 RPL35P42766 123 aaKnown RBP8.39□□□□□ -1.07
HPS4-218ENST00000519774 TDRG1Q3Y452 100 aa8.39□□□□□ -1.07
HPS4-218ENST00000519774 PCNPQ8WW12 178 aaKnown RBP8.39□□□□□ -1.07
HPS4-218ENST00000519774 STARD9Q9P2P6 4700 aa8.38□□□□□ -1.07
HPS4-218ENST00000519774 TRGV2A0A075B6R0 118 aa8.38□□□□□ -1.07
HPS4-218ENST00000519774 IGHV4-4A0A075B6R2 117 aa8.38□□□□□ -1.07
HPS4-218ENST00000519774 IGHV3-16A0A0C4DH30 117 aa8.38□□□□□ -1.07
HPS4-218ENST00000519774 FABP5P3A8MUU1 101 aa8.38□□□□□ -1.07
HPS4-218ENST00000519774 F5H768 121 aa8.38□□□□□ -1.07
HPS4-218ENST00000519774 PDE6DO43924 150 aa8.38□□□□□ -1.07
HPS4-218ENST00000519774 SPINK4O60575 86 aa8.38□□□□□ -1.07
HPS4-218ENST00000519774 SH2D1AO60880 128 aa8.38□□□□□ -1.07
HPS4-218ENST00000519774 GHRHP01286 108 aa8.38□□□□□ -1.07
HPS4-218ENST00000519774 TAGLN2P37802 199 aaKnown RBP8.38□□□□□ -1.07
HPS4-218ENST00000519774 TEX261Q6UWH6 196 aa8.38□□□□□ -1.07
HPS4-218ENST00000519774 BAGE2Q86Y30 109 aa8.38□□□□□ -1.07
HPS4-218ENST00000519774 LINC00612Q8N6U2 182 aa8.38□□□□□ -1.07
HPS4-218ENST00000519774 MED9Q9NWA0 146 aa8.38□□□□□ -1.07
HPS4-218ENST00000519774 RBFOX3A6NFN3 312 aa8.37□□□□□ -1.07
HPS4-218ENST00000519774 M0R036 132 aa8.37□□□□□ -1.07
HPS4-218ENST00000519774 ORM1P02763 201 aa8.37□□□□□ -1.07
HPS4-218ENST00000519774 CRIP1P50238 77 aa8.37□□□□□ -1.07
HPS4-218ENST00000519774 CENPWQ5EE01 88 aa8.37□□□□□ -1.07
HPS4-218ENST00000519774 TOR2AQ5JU69 321 aa8.37□□□□□ -1.07
HPS4-218ENST00000519774 FAM162BQ5T6X4 162 aa8.37□□□□□ -1.07
HPS4-218ENST00000519774 PRR27Q6MZM9 219 aa8.37□□□□□ -1.07
HPS4-218ENST00000519774 COX8CQ7Z4L0 72 aa8.37□□□□□ -1.07
HPS4-218ENST00000519774 LYPD6BQ8NI32 183 aa8.37□□□□□ -1.07
HPS4-218ENST00000519774 SPXQ9BT56 116 aa8.37□□□□□ -1.07
HPS4-218ENST00000519774 IGKV3D-20A0A0C4DH25 116 aa8.36□□□□□ -1.07
HPS4-218ENST00000519774 LCE6AA0A183 80 aa8.36□□□□□ -1.07
HPS4-218ENST00000519774 RAB19A4D1S5 217 aa8.36□□□□□ -1.07
HPS4-218ENST00000519774 B4DEV8 164 aa8.36□□□□□ -1.07
HPS4-218ENST00000519774 ZNF674Q2M3X9 581 aa8.36□□□□□ -1.07
HPS4-218ENST00000519774 TMEM88Q6PEY1 159 aa8.36□□□□□ -1.07
HPS4-218ENST00000519774 NDUFAF3Q9BU61 184 aa8.36□□□□□ -1.07
HPS4-218ENST00000519774 APLNQ9ULZ1 77 aa8.36□□□□□ -1.07
HPS4-218ENST00000519774 TMSB15BA0A087X1C1 80 aa8.35□□□□□ -1.07
HPS4-218ENST00000519774 IGHV3-53P01767 116 aa8.35□□□□□ -1.07
HPS4-218ENST00000519774 MGST1P10620 155 aaKnown RBP8.35□□□□□ -1.07
HPS4-218ENST00000519774 S100A4P26447 101 aaKnown RBP8.35□□□□□ -1.07
HPS4-218ENST00000519774 ASIPP42127 132 aa8.35□□□□□ -1.07
HPS4-218ENST00000519774 GNG4P50150 75 aa8.35□□□□□ -1.07
HPS4-218ENST00000519774 TCTAP57738 103 aa8.35□□□□□ -1.07
HPS4-218ENST00000519774 OR5I1Q13606 314 aa8.35□□□□□ -1.07
HPS4-218ENST00000519774 LGALS9BQ3B8N2 356 aa8.35□□□□□ -1.07
HPS4-218ENST00000519774 ZNF506Q5JVG8 444 aa8.35□□□□□ -1.07
HPS4-218ENST00000519774 EIF5A2Q9GZV4 153 aaKnown RBP8.35□□□□□ -1.07
HPS4-218ENST00000519774 GRIFINA4D1Z8 144 aa8.34□□□□□ -1.07
HPS4-218ENST00000519774 C9JCJ5 164 aa8.34□□□□□ -1.07
HPS4-218ENST00000519774 M0R2P5 195 aa8.34□□□□□ -1.07
HPS4-218ENST00000519774 LY6G6CO95867 125 aa8.34□□□□□ -1.07
HPS4-218ENST00000519774 HOXA5P20719 270 aa8.34□□□□□ -1.07
HPS4-218ENST00000519774 CEBPGP53567 150 aa8.34□□□□□ -1.07
HPS4-218ENST00000519774 LINC00476Q8WZB0 136 aa8.34□□□□□ -1.07
HPS4-218ENST00000519774 FAM210AQ96ND0 272 aa8.34□□□□□ -1.07
HPS4-218ENST00000519774 MLST8Q9BVC4 326 aa8.34□□□□□ -1.07
HPS4-218ENST00000519774 TRBV20OR9-2A0A075B6H5 130 aa8.33□□□□□ -1.08
HPS4-218ENST00000519774 PGPEP1LA6NFU8 196 aa8.33□□□□□ -1.08
HPS4-218ENST00000519774 KRBOX1C9JBD0 128 aa8.33□□□□□ -1.08
HPS4-218ENST00000519774 H3BVH4 76 aa8.33□□□□□ -1.08
HPS4-218ENST00000519774 EREGO14944 169 aa8.33□□□□□ -1.08
HPS4-218ENST00000519774 RPL19P84098 196 aaKnown RBP8.33□□□□□ -1.08
HPS4-218ENST00000519774 FAM210BQ96KR6 192 aa8.33□□□□□ -1.08
HPS4-218ENST00000519774 C9orf85Q96MD7 179 aa8.33□□□□□ -1.08
HPS4-218ENST00000519774 PARLQ9H300 379 aa8.33□□□□□ -1.08
HPS4-218ENST00000519774 TRAV26-1A0A087WT03 109 aa8.32□□□□□ -1.08
HPS4-218ENST00000519774 A0A0J9YY99 117 aa8.32□□□□□ -1.08
HPS4-218ENST00000519774 TMEM250H0YL14 139 aa8.32□□□□□ -1.08
HPS4-218ENST00000519774 IGLV2-8P01709 118 aa8.32□□□□□ -1.08
HPS4-218ENST00000519774 SFTA3P0C7M3 94 aa8.32□□□□□ -1.08
HPS4-218ENST00000519774 RNASE3P12724 160 aaKnown RBP8.32□□□□□ -1.08
HPS4-218ENST00000519774 RASL10AQ92737 203 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms