RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 NPYP01303 97 aa8.79□□□□□ -1
PCDHGB4-201ENST00000519479 SCGB1A1P11684 91 aa8.79□□□□□ -1
PCDHGB4-201ENST00000519479 GAGE2BQ13066 116 aa8.79□□□□□ -1
PCDHGB4-201ENST00000519479 GAGE2EQ4V326 116 aa8.79□□□□□ -1
PCDHGB4-201ENST00000519479 GAGE2DQ9UEU5 116 aa8.79□□□□□ -1
PCDHGB4-201ENST00000519479 DPH3P1Q9H4G8 78 aa8.79□□□□□ -1
PCDHGB4-201ENST00000519479 IGHV4-61A0A0C4DH41 118 aa8.79□□□□□ -1
PCDHGB4-201ENST00000519479 LINC00322Q6ZN03 302 aaPredicted RBP8.79□□□□□ -1
PCDHGB4-201ENST00000519479 AGPAT4-IT1Q9H0P7 198 aa8.79□□□□□ -1
PCDHGB4-201ENST00000519479 DUSP14O95147 198 aaKnown RBP8.78□□□□□ -1
PCDHGB4-201ENST00000519479 PIP4P2Q8N4L2 257 aa8.78□□□□□ -1
PCDHGB4-201ENST00000519479 A0A1W2PRX2 142 aa8.78□□□□□ -1
PCDHGB4-201ENST00000519479 RNF223E7ERA6 249 aa8.78□□□□□ -1
PCDHGB4-201ENST00000519479 H7C1H1 209 aa8.78□□□□□ -1
PCDHGB4-201ENST00000519479 IGHV4-39P01824 125 aa8.78□□□□□ -1
PCDHGB4-201ENST00000519479 CRYGBP07316 175 aa8.78□□□□□ -1
PCDHGB4-201ENST00000519479 SMPXQ9UHP9 88 aa8.78□□□□□ -1
PCDHGB4-201ENST00000519479 NDUFA4O00483 81 aa8.78□□□□□ -1
PCDHGB4-201ENST00000519479 HOXA3O43365 443 aaPredicted RBP8.78□□□□□ -1
PCDHGB4-201ENST00000519479 SPINK8P0C7L1 97 aa8.78□□□□□ -1
PCDHGB4-201ENST00000519479 Q96MF0 132 aa8.78□□□□□ -1
PCDHGB4-201ENST00000519479 TSSC4Q9Y5U2 329 aaPredicted RBP8.78□□□□□ -1
PCDHGB4-201ENST00000519479 TNFRSF18Q9Y5U5 241 aa8.78□□□□□ -1
PCDHGB4-201ENST00000519479 LOC400499M0QZD8 3231 aa8.78□□□□□ -1
PCDHGB4-201ENST00000519479 A8MWV9 139 aa8.77□□□□□ -1.01
PCDHGB4-201ENST00000519479 LINC01559Q495D7 138 aa8.77□□□□□ -1.01
PCDHGB4-201ENST00000519479 ZC2HC1BQ5TFG8 222 aa8.77□□□□□ -1.01
PCDHGB4-201ENST00000519479 CHTOPQ9Y3Y2 248 aaKnown RBP8.77□□□□□ -1.01
PCDHGB4-201ENST00000519479 C19orf71A6NCJ1 209 aa8.77□□□□□ -1.01
PCDHGB4-201ENST00000519479 SYNJ2BPP57105 145 aa8.77□□□□□ -1.01
PCDHGB4-201ENST00000519479 PAPPA-AS1Q5QFB9 102 aa8.77□□□□□ -1.01
PCDHGB4-201ENST00000519479 LINC00173Q6ZV60 143 aa8.77□□□□□ -1.01
PCDHGB4-201ENST00000519479 C11orf44Q8N8P7 122 aa8.77□□□□□ -1.01
PCDHGB4-201ENST00000519479 GEMIN7Q9H840 131 aaKnown RBP8.77□□□□□ -1.01
PCDHGB4-201ENST00000519479 BUB3O43684 328 aa8.77□□□□□ -1.01
PCDHGB4-201ENST00000519479 SIRPDQ9H106 197 aa8.77□□□□□ -1.01
PCDHGB4-201ENST00000519479 PEMTQ9UBM1 199 aa8.77□□□□□ -1.01
PCDHGB4-201ENST00000519479 DMXL1Q9Y485 3027 aa8.77□□□□□ -1.01
PCDHGB4-201ENST00000519479 CFHR4Q92496 578 aa8.76□□□□□ -1.01
PCDHGB4-201ENST00000519479 LINC01587Q99440 93 aa8.76□□□□□ -1.01
PCDHGB4-201ENST00000519479 TRAV26-2A0A0B4J265 109 aa8.76□□□□□ -1.01
PCDHGB4-201ENST00000519479 ODF3BA8MYP8 253 aa8.76□□□□□ -1.01
PCDHGB4-201ENST00000519479 PCSK5Q92824 1860 aa8.76□□□□□ -1.01
PCDHGB4-201ENST00000519479 ZNF747Q9BV97 191 aa8.76□□□□□ -1.01
PCDHGB4-201ENST00000519479 MLST8Q9BVC4 326 aa8.76□□□□□ -1.01
PCDHGB4-201ENST00000519479 CCDC168Q8NDH2 2452 aa8.76□□□□□ -1.01
PCDHGB4-201ENST00000519479 C9orf118A6NHY6 69 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 LY6LH3BQJ8 138 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 H3BRM9 83 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 UBE2L6O14933 153 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 FSTL3O95633 263 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 IGHV4-38-2P0DP08 117 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 C19orf54Q5BKX5 351 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 GDF5OSQ5U4N7 250 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 ATP6V0BQ99437 205 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 MBD6Q96DN6 1003 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 MSRB1Q9NZV6 116 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 A0A087WWL8 130 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 FOXE3Q13461 319 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 LRRC75A-AS1Q8N1F1 130 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 CSTL1Q9H114 145 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 PRAC2D3DTV9 90 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 CRXO43186 299 aaPredicted RBP8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 C10orf105Q8TEF2 133 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 TP53TG3Q9ULZ0 132 aa8.75□□□□□ -1.01
PCDHGB4-201ENST00000519479 NAV2Q8IVL1 2488 aa8.74□□□□□ -1.01
PCDHGB4-201ENST00000519479 TNFRSF13BO14836 293 aaPredicted RBP8.74□□□□□ -1.01
PCDHGB4-201ENST00000519479 AZU1P20160 251 aa8.74□□□□□ -1.01
PCDHGB4-201ENST00000519479 ETDBQ3ZM63 59 aa8.74□□□□□ -1.01
PCDHGB4-201ENST00000519479 C3orf56Q8N813 242 aa8.74□□□□□ -1.01
PCDHGB4-201ENST00000519479 C5orf56Q8N8D9 126 aa8.74□□□□□ -1.01
PCDHGB4-201ENST00000519479 IGHV4-30-2A0A087WSY4 118 aa8.74□□□□□ -1.01
PCDHGB4-201ENST00000519479 BLCAPP62952 87 aa8.74□□□□□ -1.01
PCDHGB4-201ENST00000519479 ANXA2RQ3ZCQ2 193 aa8.74□□□□□ -1.01
PCDHGB4-201ENST00000519479 CD300EQ496F6 205 aaPredicted RBP8.74□□□□□ -1.01
PCDHGB4-201ENST00000519479 BVES-AS1Q5T3Y7 98 aa8.74□□□□□ -1.01
PCDHGB4-201ENST00000519479 A0A1B0GXF2 115 aa8.74□□□□□ -1.01
PCDHGB4-201ENST00000519479 F6UB75 175 aa8.74□□□□□ -1.01
PCDHGB4-201ENST00000519479 Q8N8P6 123 aa8.74□□□□□ -1.01
PCDHGB4-201ENST00000519479 CFAP47Q6ZTR5 3102 aa8.73□□□□□ -1.01
PCDHGB4-201ENST00000519479 K7EP34 96 aa8.73□□□□□ -1.01
PCDHGB4-201ENST00000519479 ZNF48Q96MX3 618 aaPredicted RBP8.73□□□□□ -1.01
PCDHGB4-201ENST00000519479 PTPRBP23467 1997 aa8.73□□□□□ -1.01
PCDHGB4-201ENST00000519479 TRGV11A0A075B6L2 103 aa8.73□□□□□ -1.01
PCDHGB4-201ENST00000519479 MYCNOSP40205 109 aa8.73□□□□□ -1.01
PCDHGB4-201ENST00000519479 LMO4P61968 165 aa8.73□□□□□ -1.01
PCDHGB4-201ENST00000519479 CDSNQ15517 529 aa8.73□□□□□ -1.01
PCDHGB4-201ENST00000519479 LGALS9BQ3B8N2 356 aa8.73□□□□□ -1.01
PCDHGB4-201ENST00000519479 LGALS9CQ6DKI2 356 aa8.73□□□□□ -1.01
PCDHGB4-201ENST00000519479 MRAP2Q96G30 205 aa8.73□□□□□ -1.01
PCDHGB4-201ENST00000519479 LAMA5O15230 3695 aa8.73□□□□□ -1.01
PCDHGB4-201ENST00000519479 RBAKDNA6NC62 111 aa8.73□□□□□ -1.01
PCDHGB4-201ENST00000519479 TMEM95Q3KNT9 176 aa8.73□□□□□ -1.01
PCDHGB4-201ENST00000519479 ZNF815PA8K554 130 aa8.72□□□□□ -1.01
PCDHGB4-201ENST00000519479 PLNP26678 52 aa8.72□□□□□ -1.01
PCDHGB4-201ENST00000519479 SUMO2P61956 95 aaKnown RBP8.72□□□□□ -1.01
PCDHGB4-201ENST00000519479 MYO9AB2RTY4 2548 aa8.72□□□□□ -1.01
PCDHGB4-201ENST00000519479 IGHV7-4-1A0A0J9YVY3 117 aa8.72□□□□□ -1.01
PCDHGB4-201ENST00000519479 GAGE12HA6NDE8 117 aa8.72□□□□□ -1.01
PCDHGB4-201ENST00000519479 COX8AP10176 69 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms