RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 J3KRW8 73 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 SMIM17P0DL12 118 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 IGHV4-38-2P0DP08 117 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 EDN2P20800 178 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 LCNL1Q6ZST4 164 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 OR9G4Q8NGQ1 327 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 IGHV4-61A0A0C4DH41 118 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 TMEM8BA6NDV4 472 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 C9orf118A6NHY6 69 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 H3BRM9 83 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 HSD52Q0P140 79 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 TM4SF20Q53R12 229 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 WFDC12Q8WWY7 111 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 FOXC2Q99958 501 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 MOB4Q9Y3A3 225 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 CUBNO60494 3623 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 FBN2P35556 2912 aa6.4□□□□□ -1.38
CTNNA1-210ENST00000518825 PKD1L2Q7Z442 2459 aa6.4□□□□□ -1.38
CTNNA1-210ENST00000518825 F6UB75 175 aa6.4□□□□□ -1.38
CTNNA1-210ENST00000518825 OCIAD2Q56VL3 154 aa6.4□□□□□ -1.38
CTNNA1-210ENST00000518825 GTSCR1Q86UQ5 136 aa6.4□□□□□ -1.38
CTNNA1-210ENST00000518825 C16orf92Q96LL3 132 aa6.4□□□□□ -1.38
CTNNA1-210ENST00000518825 ZNF469Q96JG9 3925 aaPredicted RBP6.4□□□□□ -1.39
CTNNA1-210ENST00000518825 TRAV40A0A0B4J280 105 aa6.4□□□□□ -1.39
CTNNA1-210ENST00000518825 IGHV1-69DA0A0B4J2H0 117 aa6.4□□□□□ -1.39
CTNNA1-210ENST00000518825 K7EMI3 77 aa6.4□□□□□ -1.39
CTNNA1-210ENST00000518825 IGHV1-69P01742 117 aa6.4□□□□□ -1.39
CTNNA1-210ENST00000518825 PRSS1P07477 247 aa6.4□□□□□ -1.39
CTNNA1-210ENST00000518825 ARL3P36405 182 aa6.4□□□□□ -1.39
CTNNA1-210ENST00000518825 MAPKAPK5-AS1Q8N8E1 139 aa6.4□□□□□ -1.39
CTNNA1-210ENST00000518825 FAM19A4Q96LR4 140 aa6.4□□□□□ -1.39
CTNNA1-210ENST00000518825 HIF1ANQ9NWT6 349 aa6.4□□□□□ -1.39
CTNNA1-210ENST00000518825 MRPL35Q9NZE8 188 aaKnown RBP6.4□□□□□ -1.39
CTNNA1-210ENST00000518825 UFC1Q9Y3C8 167 aa6.4□□□□□ -1.39
CTNNA1-210ENST00000518825 SPG11Q96JI7 2443 aa6.4□□□□□ -1.39
CTNNA1-210ENST00000518825 FAM223BA6NKX1 122 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 H3BUT2 72 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 IGKCP01834 107 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 FXYD2P54710 66 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 FAM223AQ8IWN6 122 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 USP9XQ93008 2570 aaPredicted RBP6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 MXRA5Q9NR99 2828 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 GNLYP22749 145 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 BLCAPP62952 87 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 OR4X2Q8NGF9 303 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 RASL10AQ92737 203 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 RAB37Q96AX2 223 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 MUC4Q99102 2169 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 AKAP9Q99996 3911 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 IGHV3-11P01762 117 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 LAGE3Q14657 143 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 ZC2HC1BQ5TFG8 222 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 SPANXN1Q5VSR9 72 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 MEGF9Q9H1U4 602 aa6.39□□□□□ -1.39
CTNNA1-210ENST00000518825 IGSF10Q6WRI0 2623 aa6.38□□□□□ -1.39
CTNNA1-210ENST00000518825 TRBV25-1A0A075B6N4 114 aa6.38□□□□□ -1.39
CTNNA1-210ENST00000518825 LY6EQ16553 131 aa6.38□□□□□ -1.39
CTNNA1-210ENST00000518825 PHLDA1Q8WV24 401 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-210ENST00000518825 RPL39LQ96EH5 51 aaKnown RBP6.38□□□□□ -1.39
CTNNA1-210ENST00000518825 A0A0G2JLM5 398 aa6.38□□□□□ -1.39
CTNNA1-210ENST00000518825 SAP30O75446 220 aa6.38□□□□□ -1.39
CTNNA1-210ENST00000518825 C9orf139Q6ZV77 190 aa6.38□□□□□ -1.39
CTNNA1-210ENST00000518825 GNRH2O43555 120 aa6.38□□□□□ -1.39
CTNNA1-210ENST00000518825 ATP6V0BQ99437 205 aa6.38□□□□□ -1.39
CTNNA1-210ENST00000518825 TMEM160Q9NX00 188 aa6.38□□□□□ -1.39
CTNNA1-210ENST00000518825 A6NDN8 102 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 GAGE10A6NGK3 116 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 K7ERJ3 54 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 NDUFA4O00483 81 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 DPM2O94777 84 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 RNASE3P12724 160 aaKnown RBP6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 TMEM95Q3KNT9 176 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 ANXA2RQ3ZCQ2 193 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 M0R381 172 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 AVPP01185 164 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 IGHG2P01859 326 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 C14orf178Q8N769 122 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 CHAC1Q9BUX1 264 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 PRORYQ9H606 182 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 HIGD1BQ9P298 99 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 LENEPQ9Y5L5 61 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 A0A087WX48 190 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 K7EP34 96 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 APRG1Q8IVJ8 170 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 SMIM2Q9BVW6 85 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 CSTL1Q9H114 145 aa6.37□□□□□ -1.39
CTNNA1-210ENST00000518825 IGKV3-7A0A075B6H7 116 aa6.36□□□□□ -1.39
CTNNA1-210ENST00000518825 A0A1W2PPM0 123 aa6.36□□□□□ -1.39
CTNNA1-210ENST00000518825 A6NDX4 124 aa6.36□□□□□ -1.39
CTNNA1-210ENST00000518825 H3BUX3 64 aa6.36□□□□□ -1.39
CTNNA1-210ENST00000518825 ATP5LO75964 103 aa6.36□□□□□ -1.39
CTNNA1-210ENST00000518825 LINC00477Q96M19 166 aa6.36□□□□□ -1.39
CTNNA1-210ENST00000518825 SRD5A1P18405 259 aa6.36□□□□□ -1.39
CTNNA1-210ENST00000518825 RNASE4P34096 147 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-210ENST00000518825 LINC00315P59091 139 aa6.36□□□□□ -1.39
CTNNA1-210ENST00000518825 SRSF1Q07955 248 aaKnown RBP eCLIP6.36□□□□□ -1.39
CTNNA1-210ENST00000518825 MRAP2Q96G30 205 aa6.36□□□□□ -1.39
CTNNA1-210ENST00000518825 PIEZO1Q92508 2521 aa6.36□□□□□ -1.39
CTNNA1-210ENST00000518825 IGHV4-30-2A0A087WSY4 118 aa6.36□□□□□ -1.39
CTNNA1-210ENST00000518825 IGLV1-40P01703 118 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms