RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 FABP5P3A8MUU1 101 aa14.08□□□□□ -0.16
SDC2-202ENST00000518385 IGHG2P01859 326 aa14.08□□□□□ -0.16
SDC2-202ENST00000518385 TMEM219Q86XT9 240 aa14.08□□□□□ -0.16
SDC2-202ENST00000518385 MCRIP2Q9BUT9 160 aaKnown RBP14.08□□□□□ -0.16
SDC2-202ENST00000518385 ZNF580Q9UK33 172 aa14.08□□□□□ -0.16
SDC2-202ENST00000518385 CSMD1Q96PZ7 3565 aa14.08□□□□□ -0.16
SDC2-202ENST00000518385 LOC389332A0A1B0GUA5 103 aa14.07□□□□□ -0.16
SDC2-202ENST00000518385 H3BUT2 72 aa14.07□□□□□ -0.16
SDC2-202ENST00000518385 H3BUX3 64 aa14.07□□□□□ -0.16
SDC2-202ENST00000518385 TWIST1Q15672 202 aa14.07□□□□□ -0.16
SDC2-202ENST00000518385 ASCL2Q99929 193 aa14.07□□□□□ -0.16
SDC2-202ENST00000518385 CREBBPQ92793 2442 aa14.07□□□□□ -0.16
SDC2-202ENST00000518385 G3V318 75 aa14.06□□□□□ -0.16
SDC2-202ENST00000518385 NPYP01303 97 aa14.06□□□□□ -0.16
SDC2-202ENST00000518385 ATP5G2Q06055 141 aa14.06□□□□□ -0.16
SDC2-202ENST00000518385 MRPL53Q96EL3 112 aaKnown RBP14.06□□□□□ -0.16
SDC2-202ENST00000518385 S4R3C0 116 aa14.06□□□□□ -0.16
SDC2-202ENST00000518385 ITPR3Q14573 2671 aa14.06□□□□□ -0.16
SDC2-202ENST00000518385 LINC01548A6NM66 108 aa14.05□□□□□ -0.16
SDC2-202ENST00000518385 LINC01619G3V211 115 aa14.05□□□□□ -0.16
SDC2-202ENST00000518385 M0R3E3 92 aa14.05□□□□□ -0.16
SDC2-202ENST00000518385 ZNF207O43670 478 aaKnown RBP14.05□□□□□ -0.16
SDC2-202ENST00000518385 SCGB1A1P11684 91 aa14.05□□□□□ -0.16
SDC2-202ENST00000518385 ERASQ7Z444 233 aa14.05□□□□□ -0.16
SDC2-202ENST00000518385 Q8N8P6 123 aa14.05□□□□□ -0.16
SDC2-202ENST00000518385 SLC50A1Q9BRV3 221 aa14.05□□□□□ -0.16
SDC2-202ENST00000518385 SPCS1Q9Y6A9 102 aa14.05□□□□□ -0.16
SDC2-202ENST00000518385 CLEC3BP05452 202 aa14.05□□□□□ -0.16
SDC2-202ENST00000518385 FAM106AQ4KMX7 169 aa14.05□□□□□ -0.16
SDC2-202ENST00000518385 PRR31Q5SQ13 230 aa14.05□□□□□ -0.16
SDC2-202ENST00000518385 C9orf139Q6ZV77 190 aa14.05□□□□□ -0.16
SDC2-202ENST00000518385 IGKCP01834 107 aa14.04□□□□□ -0.16
SDC2-202ENST00000518385 ODF1Q14990 250 aa14.04□□□□□ -0.16
SDC2-202ENST00000518385 CSPG4Q6UVK1 2322 aa14.04□□□□□ -0.16
SDC2-202ENST00000518385 USMG5Q96IX5 58 aa14.04□□□□□ -0.16
SDC2-202ENST00000518385 JMJD8Q96S16 334 aa14.04□□□□□ -0.16
SDC2-202ENST00000518385 TM2D2Q9BX73 214 aa14.04□□□□□ -0.16
SDC2-202ENST00000518385 SVEP1Q4LDE5 3571 aa14.03□□□□□ -0.16
SDC2-202ENST00000518385 DPM2O94777 84 aa14.03□□□□□ -0.16
SDC2-202ENST00000518385 IGHV3-23P01764 117 aa14.03□□□□□ -0.16
SDC2-202ENST00000518385 BCL6BQ8N143 479 aaPredicted RBP14.03□□□□□ -0.16
SDC2-202ENST00000518385 RNF185Q96GF1 192 aa14.03□□□□□ -0.16
SDC2-202ENST00000518385 NMUP48645 174 aa14.02□□□□□ -0.16
SDC2-202ENST00000518385 KRTAP1-1Q07627 177 aa14.02□□□□□ -0.16
SDC2-202ENST00000518385 SAMD5Q5TGI4 173 aa14.02□□□□□ -0.16
SDC2-202ENST00000518385 CCDC140Q96MF4 163 aa14.02□□□□□ -0.16
SDC2-202ENST00000518385 ZANQ9Y493 2812 aa14.02□□□□□ -0.17
SDC2-202ENST00000518385 J3QR89 54 aa14.01□□□□□ -0.17
SDC2-202ENST00000518385 K7EMI3 77 aa14.01□□□□□ -0.17
SDC2-202ENST00000518385 TNFRSF6BO95407 300 aa14.01□□□□□ -0.17
SDC2-202ENST00000518385 LY6EQ16553 131 aa14.01□□□□□ -0.17
SDC2-202ENST00000518385 DEFB112Q30KQ8 113 aa14.01□□□□□ -0.17
SDC2-202ENST00000518385 TEX29Q8N6K0 151 aa14.01□□□□□ -0.17
SDC2-202ENST00000518385 ZFAND3Q9H8U3 227 aa14.01□□□□□ -0.17
SDC2-202ENST00000518385 SNAI2O43623 268 aa14□□□□□ -0.17
SDC2-202ENST00000518385 PPIFP30405 207 aaKnown RBP14□□□□□ -0.17
SDC2-202ENST00000518385 LEPP41159 167 aa14□□□□□ -0.17
SDC2-202ENST00000518385 CLEC19AQ6UXS0 136 aa14□□□□□ -0.17
SDC2-202ENST00000518385 AKAP9Q99996 3911 aa14□□□□□ -0.17
SDC2-202ENST00000518385 IGKV2-40A0A087WW87 121 aaPredicted RBP14□□□□□ -0.17
SDC2-202ENST00000518385 IGKV2D-40P01614 121 aaPredicted RBP14□□□□□ -0.17
SDC2-202ENST00000518385 TRGV3P03979 118 aa14□□□□□ -0.17
SDC2-202ENST00000518385 Q71RC1 249 aaPredicted RBP14□□□□□ -0.17
SDC2-202ENST00000518385 CHAC1Q9BUX1 264 aa14□□□□□ -0.17
SDC2-202ENST00000518385 HHLA3Q9XRX5 114 aa14□□□□□ -0.17
SDC2-202ENST00000518385 TEX15Q9BXT5 2789 aa14□□□□□ -0.17
SDC2-202ENST00000518385 ZNF469Q96JG9 3925 aaPredicted RBP14□□□□□ -0.17
SDC2-202ENST00000518385 IGHV4-4A0A075B6R2 117 aa13.99□□□□□ -0.17
SDC2-202ENST00000518385 TMSB15BA0A087X1C1 80 aa13.99□□□□□ -0.17
SDC2-202ENST00000518385 IL17RELQ6ZVW7 336 aa13.99□□□□□ -0.17
SDC2-202ENST00000518385 F8W1H4 67 aa13.98□□□□□ -0.17
SDC2-202ENST00000518385 ORM1P02763 201 aa13.98□□□□□ -0.17
SDC2-202ENST00000518385 PRSS1P07477 247 aa13.98□□□□□ -0.17
SDC2-202ENST00000518385 PLNP26678 52 aa13.98□□□□□ -0.17
SDC2-202ENST00000518385 PCP2Q8IVA1 136 aa13.98□□□□□ -0.17
SDC2-202ENST00000518385 MYOZ3Q8TDC0 251 aa13.98□□□□□ -0.17
SDC2-202ENST00000518385 DKK2Q9UBU2 259 aa13.98□□□□□ -0.17
SDC2-202ENST00000518385 TMEM89A2RUT3 159 aa13.97□□□□□ -0.17
SDC2-202ENST00000518385 CEND1Q8N111 149 aa13.97□□□□□ -0.17
SDC2-202ENST00000518385 METTL26Q96S19 204 aa13.97□□□□□ -0.17
SDC2-202ENST00000518385 VGLL1Q99990 258 aa13.97□□□□□ -0.17
SDC2-202ENST00000518385 CELSR1Q9NYQ6 3014 aa13.97□□□□□ -0.17
SDC2-202ENST00000518385 TRAV12-1A0A0B4J245 112 aa13.96□□□□□ -0.17
SDC2-202ENST00000518385 BUB3O43684 328 aa13.96□□□□□ -0.17
SDC2-202ENST00000518385 IGLV1-40P01703 118 aa13.96□□□□□ -0.17
SDC2-202ENST00000518385 Q6YL49 198 aa13.96□□□□□ -0.17
SDC2-202ENST00000518385 MRAP2Q96G30 205 aa13.96□□□□□ -0.17
SDC2-202ENST00000518385 LENEPQ9Y5L5 61 aa13.96□□□□□ -0.17
SDC2-202ENST00000518385 FLNAP21333 2647 aaKnown RBP13.96□□□□□ -0.17
SDC2-202ENST00000518385 IGLV2-18A0A075B6J9 118 aa13.96□□□□□ -0.18
SDC2-202ENST00000518385 LINC01549A6NIU2 74 aa13.96□□□□□ -0.18
SDC2-202ENST00000518385 TMEM238C9JI98 176 aa13.96□□□□□ -0.18
SDC2-202ENST00000518385 SAP30O75446 220 aa13.96□□□□□ -0.18
SDC2-202ENST00000518385 ZNF80P51504 273 aaPredicted RBP13.96□□□□□ -0.18
SDC2-202ENST00000518385 FOXE3Q13461 319 aa13.96□□□□□ -0.18
SDC2-202ENST00000518385 YAE1D1Q9NRH1 226 aa13.96□□□□□ -0.18
SDC2-202ENST00000518385 SMAD5-AS1Q9Y6J3 95 aa13.96□□□□□ -0.18
SDC2-202ENST00000518385 U3KQE9 123 aa13.96□□□□□ -0.18
SDC2-202ENST00000518385 IGHG4P01861 327 aa13.95□□□□□ -0.18
SDC2-202ENST00000518385 GCSHP23434 173 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms