RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 KCNS1Q96KK3 526 aa9.37□□□□□ -0.91
PABPC1-205ENST00000518196 SMIM7Q9BQ49 75 aa9.37□□□□□ -0.91
PABPC1-205ENST00000518196 NAGKQ9UJ70 344 aa9.37□□□□□ -0.91
PABPC1-205ENST00000518196 NBEAL2Q6ZNJ1 2754 aa9.37□□□□□ -0.91
PABPC1-205ENST00000518196 IGHV4-28A0A0C4DH34 117 aa9.36□□□□□ -0.91
PABPC1-205ENST00000518196 ZNF727A8MUV8 499 aa9.36□□□□□ -0.91
PABPC1-205ENST00000518196 ANXA2RQ3ZCQ2 193 aa9.36□□□□□ -0.91
PABPC1-205ENST00000518196 MUC21Q5SSG8 566 aa9.36□□□□□ -0.91
PABPC1-205ENST00000518196 Q6ZQT7 251 aa9.36□□□□□ -0.91
PABPC1-205ENST00000518196 Q8NAQ8 132 aa9.36□□□□□ -0.91
PABPC1-205ENST00000518196 C16orf74Q96GX8 76 aa9.36□□□□□ -0.91
PABPC1-205ENST00000518196 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.36□□□□□ -0.91
PABPC1-205ENST00000518196 PRKDCP78527 4128 aaKnown RBP9.36□□□□□ -0.91
PABPC1-205ENST00000518196 TRBV20OR9-2A0A075B6H5 130 aa9.35□□□□□ -0.91
PABPC1-205ENST00000518196 TRGV11A0A075B6L2 103 aa9.35□□□□□ -0.91
PABPC1-205ENST00000518196 LINC00862A6NCI5 91 aa9.35□□□□□ -0.91
PABPC1-205ENST00000518196 C9JQL5 133 aa9.35□□□□□ -0.91
PABPC1-205ENST00000518196 SH2D1AO60880 128 aa9.35□□□□□ -0.91
PABPC1-205ENST00000518196 IGLV2-8P01709 118 aa9.35□□□□□ -0.91
PABPC1-205ENST00000518196 PRM2P04554 102 aa9.35□□□□□ -0.91
PABPC1-205ENST00000518196 AZU1P20160 251 aa9.35□□□□□ -0.91
PABPC1-205ENST00000518196 CRIP1P50238 77 aa9.35□□□□□ -0.91
PABPC1-205ENST00000518196 SOHLH1Q5JUK2 328 aa9.35□□□□□ -0.91
PABPC1-205ENST00000518196 PRR27Q6MZM9 219 aa9.35□□□□□ -0.91
PABPC1-205ENST00000518196 UQCC3Q6UW78 93 aa9.35□□□□□ -0.91
PABPC1-205ENST00000518196 COMMD7Q86VX2 200 aa9.35□□□□□ -0.91
PABPC1-205ENST00000518196 TMEM263Q8WUH6 116 aaKnown RBP9.35□□□□□ -0.91
PABPC1-205ENST00000518196 DAZAP1Q96EP5 407 aaKnown RBP9.35□□□□□ -0.91
PABPC1-205ENST00000518196 C11orf68Q9H3H3 251 aaKnown RBP9.35□□□□□ -0.91
PABPC1-205ENST00000518196 SDF2L1Q9HCN8 221 aa9.35□□□□□ -0.91
PABPC1-205ENST00000518196 LY96Q9Y6Y9 160 aa9.35□□□□□ -0.91
PABPC1-205ENST00000518196 A0A0J9YWU9 116 aa9.34□□□□□ -0.91
PABPC1-205ENST00000518196 DEFB4AO15263 64 aa9.34□□□□□ -0.91
PABPC1-205ENST00000518196 ORM1P02763 201 aa9.34□□□□□ -0.91
PABPC1-205ENST00000518196 EMP1P54849 157 aa9.34□□□□□ -0.91
PABPC1-205ENST00000518196 TDRG1Q3Y452 100 aa9.34□□□□□ -0.91
PABPC1-205ENST00000518196 OCC1Q8TAD7 63 aa9.34□□□□□ -0.91
PABPC1-205ENST00000518196 PGPEP1LA6NFU8 196 aa9.33□□□□□ -0.92
PABPC1-205ENST00000518196 SNURFLB1AK76 121 aa9.33□□□□□ -0.92
PABPC1-205ENST00000518196 ZNF415Q09FC8 603 aa9.33□□□□□ -0.92
PABPC1-205ENST00000518196 TMEM241Q24JQ0 296 aa9.33□□□□□ -0.92
PABPC1-205ENST00000518196 IBA57Q5T440 356 aaKnown RBP9.33□□□□□ -0.92
PABPC1-205ENST00000518196 RNASE8Q8TDE3 154 aaKnown RBP9.33□□□□□ -0.92
PABPC1-205ENST00000518196 C11orf21Q9P2W6 132 aa9.33□□□□□ -0.92
PABPC1-205ENST00000518196 TP53TG3Q9ULZ0 132 aa9.33□□□□□ -0.92
PABPC1-205ENST00000518196 TEX48A0A1B0GUV7 120 aa9.32□□□□□ -0.92
PABPC1-205ENST00000518196 B4DEV8 164 aa9.32□□□□□ -0.92
PABPC1-205ENST00000518196 GNRH2O43555 120 aa9.32□□□□□ -0.92
PABPC1-205ENST00000518196 SFTA3P0C7M3 94 aa9.32□□□□□ -0.92
PABPC1-205ENST00000518196 OR5I1Q13606 314 aa9.32□□□□□ -0.92
PABPC1-205ENST00000518196 NAT8Q9UHE5 227 aa9.32□□□□□ -0.92
PABPC1-205ENST00000518196 TIMM8BQ9Y5J9 83 aaPredicted RBP9.32□□□□□ -0.92
PABPC1-205ENST00000518196 DNAH9Q9NYC9 4486 aa9.31□□□□□ -0.92
PABPC1-205ENST00000518196 COL7A1Q02388 2944 aa9.31□□□□□ -0.92
PABPC1-205ENST00000518196 CXorf65A6NEN9 183 aa9.31□□□□□ -0.92
PABPC1-205ENST00000518196 KRBOX1C9JBD0 128 aa9.31□□□□□ -0.92
PABPC1-205ENST00000518196 M0R036 132 aa9.31□□□□□ -0.92
PABPC1-205ENST00000518196 P01737 135 aa9.31□□□□□ -0.92
PABPC1-205ENST00000518196 TYMSP04818 313 aa9.31□□□□□ -0.92
PABPC1-205ENST00000518196 SPART-AS1P0CW21 52 aa9.31□□□□□ -0.92
PABPC1-205ENST00000518196 IGKV3D-20A0A0C4DH25 116 aa9.3□□□□□ -0.92
PABPC1-205ENST00000518196 IGHV3-16A0A0C4DH30 117 aa9.3□□□□□ -0.92
PABPC1-205ENST00000518196 C19orf71A6NCJ1 209 aa9.3□□□□□ -0.92
PABPC1-205ENST00000518196 LYRM9A8MSI8 78 aa9.3□□□□□ -0.92
PABPC1-205ENST00000518196 K7EN84 100 aa9.3□□□□□ -0.92
PABPC1-205ENST00000518196 S100A4P26447 101 aaKnown RBP9.3□□□□□ -0.92
PABPC1-205ENST00000518196 ASIPP42127 132 aa9.3□□□□□ -0.92
PABPC1-205ENST00000518196 TCL1AP56279 114 aa9.3□□□□□ -0.92
PABPC1-205ENST00000518196 RPS20P60866 119 aaKnown RBP9.3□□□□□ -0.92
PABPC1-205ENST00000518196 LINC01551Q86U37 167 aa9.3□□□□□ -0.92
PABPC1-205ENST00000518196 C11orf72Q8NBR9 251 aa9.3□□□□□ -0.92
PABPC1-205ENST00000518196 SPXQ9BT56 116 aa9.3□□□□□ -0.92
PABPC1-205ENST00000518196 EDA2RQ9HAV5 297 aa9.3□□□□□ -0.92
PABPC1-205ENST00000518196 NOP10Q9NPE3 64 aaKnown RBP9.3□□□□□ -0.92
PABPC1-205ENST00000518196 GSN-AS1Q9NRJ2 163 aa9.3□□□□□ -0.92
PABPC1-205ENST00000518196 TMSB15BA0A087X1C1 80 aa9.29□□□□□ -0.92
PABPC1-205ENST00000518196 PLAC8L1A1L4L8 177 aa9.29□□□□□ -0.92
PABPC1-205ENST00000518196 DAZ2Q13117 558 aaKnown RBP9.29□□□□□ -0.92
PABPC1-205ENST00000518196 FAM222AQ5U5X8 452 aa9.29□□□□□ -0.92
PABPC1-205ENST00000518196 NUDT10Q8NFP7 164 aa9.29□□□□□ -0.92
PABPC1-205ENST00000518196 C11orf45Q8TAV5 145 aa9.29□□□□□ -0.92
PABPC1-205ENST00000518196 NUDT11Q96G61 164 aa9.29□□□□□ -0.92
PABPC1-205ENST00000518196 MDFICQ9P1T7 246 aa9.29□□□□□ -0.92
PABPC1-205ENST00000518196 DKK2Q9UBU2 259 aa9.29□□□□□ -0.92
PABPC1-205ENST00000518196 TMEM218A2RU14 115 aa9.28□□□□□ -0.92
PABPC1-205ENST00000518196 XKRY2A2RUG3 117 aa9.28□□□□□ -0.92
PABPC1-205ENST00000518196 GRIFINA4D1Z8 144 aa9.28□□□□□ -0.92
PABPC1-205ENST00000518196 GATCO43716 136 aaKnown RBP9.28□□□□□ -0.92
PABPC1-205ENST00000518196 CXCL1P09341 107 aa9.28□□□□□ -0.92
PABPC1-205ENST00000518196 ERVFC1-1P60608 527 aa9.28□□□□□ -0.92
PABPC1-205ENST00000518196 RPL23P62829 140 aaKnown RBP9.28□□□□□ -0.92
PABPC1-205ENST00000518196 RPL19P84098 196 aaKnown RBP9.28□□□□□ -0.92
PABPC1-205ENST00000518196 ADIRFQ15847 76 aa9.28□□□□□ -0.92
PABPC1-205ENST00000518196 DNLZQ5SXM8 178 aa9.28□□□□□ -0.92
PABPC1-205ENST00000518196 FAM231DQ6ZW35 169 aa9.28□□□□□ -0.92
PABPC1-205ENST00000518196 OR2D3Q8NGH3 330 aa9.28□□□□□ -0.92
PABPC1-205ENST00000518196 IL17DQ8TAD2 202 aa9.28□□□□□ -0.92
PABPC1-205ENST00000518196 CELA1Q9UNI1 258 aa9.28□□□□□ -0.92
PABPC1-205ENST00000518196 HUWE1Q7Z6Z7 4374 aaKnown RBP9.27□□□□□ -0.92
PABPC1-205ENST00000518196 TENM3Q9P273 2699 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms