RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 PRSS3P2Q8NHM4 247 aa19.9■□□□□ 0.78
COL13A1-210ENST00000517713 RNF185Q96GF1 192 aa19.9■□□□□ 0.78
COL13A1-210ENST00000517713 RAB4AP20338 218 aa19.89■□□□□ 0.77
COL13A1-210ENST00000517713 KLHL30-AS1Q8NEE0 82 aa19.88■□□□□ 0.77
COL13A1-210ENST00000517713 CACNG7P62955 275 aa19.88■□□□□ 0.77
COL13A1-210ENST00000517713 EBLN2Q6P2I7 272 aa19.88■□□□□ 0.77
COL13A1-210ENST00000517713 DUX3Q96PT4 197 aa19.88■□□□□ 0.77
COL13A1-210ENST00000517713 IGHV4-4A0A075B6R2 117 aa19.87■□□□□ 0.77
COL13A1-210ENST00000517713 KLLNB2CW77 178 aa19.87■□□□□ 0.77
COL13A1-210ENST00000517713 H3BVH4 76 aa19.87■□□□□ 0.77
COL13A1-210ENST00000517713 DDTP30046 118 aa19.87■□□□□ 0.77
COL13A1-210ENST00000517713 ANXA2RQ3ZCQ2 193 aa19.87■□□□□ 0.77
COL13A1-210ENST00000517713 FA2HQ7L5A8 372 aa19.87■□□□□ 0.77
COL13A1-210ENST00000517713 TLN2Q9Y4G6 2542 aa19.87■□□□□ 0.77
COL13A1-210ENST00000517713 SMKR1H3BMG3 65 aa19.86■□□□□ 0.77
COL13A1-210ENST00000517713 AP5S1Q9NUS5 200 aa19.86■□□□□ 0.77
COL13A1-210ENST00000517713 PEMTQ9UBM1 199 aa19.86■□□□□ 0.77
COL13A1-210ENST00000517713 A0A0J9YX75 114 aa19.86■□□□□ 0.77
COL13A1-210ENST00000517713 SPANXN1Q5VSR9 72 aa19.86■□□□□ 0.77
COL13A1-210ENST00000517713 BTF3P20290 206 aaKnown RBP19.85■□□□□ 0.77
COL13A1-210ENST00000517713 IFI27P40305 119 aaPredicted RBP19.85■□□□□ 0.77
COL13A1-210ENST00000517713 SCGB2A2Q13296 93 aa19.85■□□□□ 0.77
COL13A1-210ENST00000517713 TDRG1Q3Y452 100 aa19.85■□□□□ 0.77
COL13A1-210ENST00000517713 OR9G4Q8NGQ1 327 aa19.85■□□□□ 0.77
COL13A1-210ENST00000517713 SIGLEC8Q9NYZ4 499 aa19.85■□□□□ 0.77
COL13A1-210ENST00000517713 LOC389332A0A1B0GUA5 103 aa19.85■□□□□ 0.77
COL13A1-210ENST00000517713 NCR2O95944 276 aa19.85■□□□□ 0.77
COL13A1-210ENST00000517713 PPBPP02775 128 aa19.85■□□□□ 0.77
COL13A1-210ENST00000517713 ASIPP42127 132 aa19.85■□□□□ 0.77
COL13A1-210ENST00000517713 SMIM15Q7Z3B0 74 aa19.85■□□□□ 0.77
COL13A1-210ENST00000517713 TIMM8BQ9Y5J9 83 aaPredicted RBP19.85■□□□□ 0.77
COL13A1-210ENST00000517713 LEPROTL1O95214 131 aa19.84■□□□□ 0.77
COL13A1-210ENST00000517713 HIST2H2BDQ6DRA6 164 aa19.84■□□□□ 0.77
COL13A1-210ENST00000517713 WFDC12Q8WWY7 111 aa19.84■□□□□ 0.77
COL13A1-210ENST00000517713 ODF3Q96PU9 254 aa19.84■□□□□ 0.77
COL13A1-210ENST00000517713 ITPR2Q14571 2701 aa19.84■□□□□ 0.77
COL13A1-210ENST00000517713 NPYP01303 97 aa19.83■□□□□ 0.77
COL13A1-210ENST00000517713 S100A4P26447 101 aaKnown RBP19.83■□□□□ 0.77
COL13A1-210ENST00000517713 KIR2DL5BA0A0G2JN68 375 aa19.83■□□□□ 0.76
COL13A1-210ENST00000517713 KIR2DL5BA0A0G2JPC4 375 aa19.83■□□□□ 0.76
COL13A1-210ENST00000517713 RNASE1P07998 156 aaKnown RBP19.83■□□□□ 0.76
COL13A1-210ENST00000517713 EVI2AP22794 236 aa19.83■□□□□ 0.76
COL13A1-210ENST00000517713 LEPP41159 167 aa19.83■□□□□ 0.76
COL13A1-210ENST00000517713 KIR2DL5AQ8N109 375 aa19.83■□□□□ 0.76
COL13A1-210ENST00000517713 DLX4Q92988 240 aaPredicted RBP19.83■□□□□ 0.76
COL13A1-210ENST00000517713 VAMP8Q9BV40 100 aa19.83■□□□□ 0.76
COL13A1-210ENST00000517713 AKAP9Q99996 3911 aa19.82■□□□□ 0.76
COL13A1-210ENST00000517713 UNC79Q9P2D8 2635 aa19.82■□□□□ 0.76
COL13A1-210ENST00000517713 SONP18583 2426 aaKnown RBP19.81■□□□□ 0.76
COL13A1-210ENST00000517713 TMEM70Q9BUB7 260 aa19.81■□□□□ 0.76
COL13A1-210ENST00000517713 GNRH2O43555 120 aa19.8■□□□□ 0.76
COL13A1-210ENST00000517713 TCF21O43680 179 aa19.8■□□□□ 0.76
COL13A1-210ENST00000517713 MED14OSP0DP75 135 aa19.8■□□□□ 0.76
COL13A1-210ENST00000517713 DEFA6Q01524 100 aa19.8■□□□□ 0.76
COL13A1-210ENST00000517713 LINC00173Q6ZV60 143 aa19.8■□□□□ 0.76
COL13A1-210ENST00000517713 TMEM160Q9NX00 188 aa19.8■□□□□ 0.76
COL13A1-210ENST00000517713 LAMTOR2Q9Y2Q5 125 aa19.8■□□□□ 0.76
COL13A1-210ENST00000517713 PAM16Q9Y3D7 125 aa19.8■□□□□ 0.76
COL13A1-210ENST00000517713 DUSP14O95147 198 aaKnown RBP19.79■□□□□ 0.76
COL13A1-210ENST00000517713 IGKV3-20P01619 116 aa19.79■□□□□ 0.76
COL13A1-210ENST00000517713 GAS8-AS1O95177 125 aa19.78■□□□□ 0.76
COL13A1-210ENST00000517713 FOXI2Q6ZQN5 318 aa19.78■□□□□ 0.76
COL13A1-210ENST00000517713 C16orf95Q9H693 158 aa19.78■□□□□ 0.76
COL13A1-210ENST00000517713 C7orf71A4D174 169 aa19.78■□□□□ 0.76
COL13A1-210ENST00000517713 FAM159AQ6UWV7 190 aa19.78■□□□□ 0.76
COL13A1-210ENST00000517713 C11orf44Q8N8P7 122 aa19.78■□□□□ 0.76
COL13A1-210ENST00000517713 ZNF418Q8TF45 676 aaPredicted RBP19.78■□□□□ 0.76
COL13A1-210ENST00000517713 SCRT2Q9NQ03 307 aa19.78■□□□□ 0.76
COL13A1-210ENST00000517713 HSPB8Q9UJY1 196 aa19.78■□□□□ 0.76
COL13A1-210ENST00000517713 PHLDA3Q9Y5J5 127 aa19.78■□□□□ 0.76
COL13A1-210ENST00000517713 TRAV12-3A0A0B4J271 114 aa19.77■□□□□ 0.76
COL13A1-210ENST00000517713 CD28P10747 220 aa19.77■□□□□ 0.76
COL13A1-210ENST00000517713 MAP1LC3AQ9H492 121 aa19.77■□□□□ 0.76
COL13A1-210ENST00000517713 TNFRSF6BO95407 300 aa19.76■□□□□ 0.75
COL13A1-210ENST00000517713 RNASE3P12724 160 aaKnown RBP19.76■□□□□ 0.75
COL13A1-210ENST00000517713 LINC01006Q8NI28 216 aa19.76■□□□□ 0.75
COL13A1-210ENST00000517713 SMR3AQ99954 134 aa19.76■□□□□ 0.75
COL13A1-210ENST00000517713 C20orf144Q9BQM9 153 aa19.76■□□□□ 0.75
COL13A1-210ENST00000517713 TRAV2A0A0B4J234 112 aa19.76■□□□□ 0.75
COL13A1-210ENST00000517713 M0R381 172 aa19.76■□□□□ 0.75
COL13A1-210ENST00000517713 SPRY2O43597 315 aa19.76■□□□□ 0.75
COL13A1-210ENST00000517713 RAX2Q96IS3 184 aa19.76■□□□□ 0.75
COL13A1-210ENST00000517713 GCN1Q92616 2671 aaKnown RBP19.76■□□□□ 0.75
COL13A1-210ENST00000517713 SYS1-DBNDD2H3BUS1 97 aa19.75■□□□□ 0.75
COL13A1-210ENST00000517713 CRXO43186 299 aaPredicted RBP19.75■□□□□ 0.75
COL13A1-210ENST00000517713 DYNLRB2Q8TF09 96 aa19.75■□□□□ 0.75
COL13A1-210ENST00000517713 A0A1W2PRX2 142 aa19.75■□□□□ 0.75
COL13A1-210ENST00000517713 TSPOP30536 169 aa19.75■□□□□ 0.75
COL13A1-210ENST00000517713 SPATA12Q7Z6I5 190 aa19.75■□□□□ 0.75
COL13A1-210ENST00000517713 TMEM61Q8N0U2 210 aa19.75■□□□□ 0.75
COL13A1-210ENST00000517713 GATA1P15976 413 aaPredicted RBP19.74■□□□□ 0.75
COL13A1-210ENST00000517713 CDKN1BP46527 198 aa19.74■□□□□ 0.75
COL13A1-210ENST00000517713 C14orf144Q96I85 54 aa19.74■□□□□ 0.75
COL13A1-210ENST00000517713 MAP1LC3CQ9BXW4 147 aa19.74■□□□□ 0.75
COL13A1-210ENST00000517713 HILS1P60008 231 aa19.73■□□□□ 0.75
COL13A1-210ENST00000517713 NDUFAF3Q9BU61 184 aa19.73■□□□□ 0.75
COL13A1-210ENST00000517713 TRAV12-2A0A075B6T6 113 aa19.73■□□□□ 0.75
COL13A1-210ENST00000517713 ATOH7Q8N100 152 aa19.73■□□□□ 0.75
COL13A1-210ENST00000517713 MYO9AB2RTY4 2548 aa19.72■□□□□ 0.75
COL13A1-210ENST00000517713 A0A096LNJ9 63 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms